Mustafa Mir

7.1k citations

41 papers · 4.7k indexed · 3 hit papers · h-index 28

Impact in

Biophysics top 0.2%
- Advanced Fluorescence Microscopy Techniques
Atomic and Molecular Physics, and Optics top 1%
- Digital Holography and Microscopy

Papers in

Biophysics 20
- Advanced Fluorescence Microscopy Techniques 14
- Cell Image Analysis Techniques 7
Atomic and Molecular Physics, and Optics 20
- Digital Holography and Microscopy 19

Co-authors: Xavier Darzacq Gabriel Popescu Alexander Emelyanov Dmitry V. Fyodorov Gary H. Karpen Amy R. Strom David T. McSwiggen Robert Tjian
Journals: Biomedical Optics Express (4 papers)Optics Express (3 papers)Scientific Reports (2 papers)Advanced Healthcare Materials (2 papers)Genes & Development (2 papers)
Partner nations: United States China Spain

In The Last Decade

Mustafa Mir

40 papers receiving 4.6k citations

Hit Papers

align trajectories log scale

Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences 2019 · 420 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2019 Genes & Development
2017 Nature
2011 Optics Express

Peers

Countries citing papers authored by Mustafa Mir

Since Specialization

Citations

This map shows the geographic impact of Mustafa Mir's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Mustafa Mir with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Mustafa Mir more than expected).

Fields of papers citing papers by Mustafa Mir

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Mustafa Mir. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Mustafa Mir. The network helps show where Mustafa Mir may publish in the future.

Co-authors

The 25 scholars most cited alongside Mustafa Mir, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Mustafa Mir Line = papers co-authored together Mustafa Mir links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Dynamic microenvironments shape nuclear organization and gene expression Current Opinion in Genetics & Development ·Tadamasa Tamura, Ricardo Rojo Baidal, Mustafa Mir	2024	10
2	Differential transcription factor hub properties dictate gene-specific occupancy and transcriptional activity Biophysical Journal ·Doina Mihǎilǎ, عباس سلیمان, Mustafa Mir	2024	1
3	Localization of the Drosophila pioneer factor GAF to subnuclear foci is driven by DNA binding and required to silence satellite repeat expression Developmental Cell ·Franz Joseph Dommerque, Desert Bighorn Council, Denis Stepanovich Mikheyev, Rocío del Pilar Glaría López, Michael Stadler, 修山下, 聂洪岩, Tyler J. Gibson, عباس سلیمان, Mustafa Mir, Shelby A. Blythe, Melissa M. Harrison	2023	15
4	Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer Molecular Cell ·T. Ishiwatari, Minjia Xie, 唐本瑞, Bo Peng, Rocío del Pilar Glaría López, Yiman Liu, Guochao Chen, Zhenyang Liu, 昌尚谷, Lingbo Xia, Qinglan Li, Mustafa Mir, Yuanyuan Li, Haitao Li, Liling Wan	2022	46
5	Towards Decoding the Sequence-Based Grammar Governing the Functions of Intrinsically Disordered Protein Regions Journal of Molecular Biology ·Shasha Chong, Mustafa Mir	2020	42
6	Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences Genes & Development ·David T. McSwiggen, Mustafa Mir, Xavier Darzacq, Robert Tjian Hit paper breakdown →	2019	420
7	Dynamic multifactor hubs interact transiently with sites of active transcription in Drosophila embryos eLife ·Mustafa Mir, Michael Stadler, Neville Braybrooke, R. Kafesjian, Melissa M. Harrison, Xavier Darzacq, Michael B. Eisen	2018	148
8	Single Molecule Imaging in Live Embryos Using Lattice Light-Sheet Microscopy Methods in molecular biology ·Mustafa Mir, Armando Reimer, Michael Stadler, 李合敏, Anders S. Hansen, Dirk Hockemeyer, Michael B. Eisen, Hernán G. García, Xavier Darzacq	2018	17
9	Dense Bicoid hubs accentuate binding along the morphogen gradient Genes & Development ·Mustafa Mir, Armando Reimer, Jenna E. Haines, Jian Wen Chen, Michael Stadler, Hernán G. García, Michael B. Eisen, Xavier Darzacq	2017	134
10	Live cell imaging of low- and non-repetitive chromosome loci using CRISPR-Cas9 Nature Communications ·Peiwu Qin, Mahmut Parlak, Cem Kuscu, Jigar N. Bandaria, Mustafa Mir, Karol Szlachta, Ritambhara Singh, Xavier Darzacq, Ahmet Yıldız, Mazhar Adli	2017	187
11	Phase correlation imaging of unlabeled cell dynamics Scientific Reports ·Lihong Ma, Rajshekhar Gannavarpu, Ru Wang, Basanta Bhaduri, Shamira Sridharan, Mustafa Mir, Arindam Chakraborty, Michael Bründl, Supriya G. Prasanth, Larry J. Millet, Martha U. Gillette, Gabriel Popescu	2016	30
12	Highly Sensitive Quantitative Imaging for Monitoring Single Cancer Cell Growth Kinetics and Drug Response PLoS ONE ·Mustafa Mir, Anna Bergamaschi, Benita S. Katzenellenbogen, Gabriel Popescu	2014	48
13	Label-Free Characterization of Emerging Human Neuronal Networks Scientific Reports ·Mustafa Mir, Taewoo Kim, Anirban Majumder, J. Dekker, Ru Wang, James Atkinson, Martha U. Gillette, Steven L. Stice, Gabriel Popescu	2014	49
14	New technologies for measuring single cell mass Lab on a Chip ·Gabriel Popescu, Kidong Park, Mustafa Mir, Rashid Bashir	2013	52
15	Visualizing Escherichia coli Sub-Cellular Structure Using Sparse Deconvolution Spatial Light Interference Tomography PLoS ONE ·Mustafa Mir, S. Derin Babacan, Tiffany Wise, N. Minh, Ido Golding, Gabriel Popescu	2012	30
16	Diffraction phase microscopy with white light Optics Letters ·Basanta Bhaduri, Hoa V. Pham, Mustafa Mir, Gabriel Popescu	2012	228
17	Blood screening using diffraction phase cytometry Journal of Biomedical Optics ·Mustafa Mir, Huafeng Ding, Zhuo Wang, Suraiya, Krishnarao Tangella, Gabriel Popescu	2010	33
18	Diffraction Phase Cytometry: blood on a CD-ROM Optics Express ·Mustafa Mir, Zhuo Wang, Krishnarao Tangella, Gabriel Popescu	2009	38
19	Live cell lithography: Using optical tweezers to create synthetic tissue Lab on a Chip ·Utkur Mirsaidov, Jan Scrimgeour, Winston Timp, Stephen Adu-Bredu, Mustafa Mir, Paul Matsudaira, G. Timp	2008	84
20	Optimal optical trap for bacterial viability Physical Review E ·Utkur Mirsaidov, Winston Timp, Hazel. Bubb, Mustafa Mir, Paul Matsudaira, G. Timp	2008	62

About Mustafa Mir

Mustafa Mir is a scholar working on Biophysics, Atomic and Molecular Physics, and Optics, Radiation, Biomedical Engineering and Cell Biology, having authored 41 papers that have together received 4.7k indexed citations. Recurring topics across this work include Digital Holography and Microscopy (19 papers), Advanced Fluorescence Microscopy Techniques (14 papers), Microfluidic and Bio-sensing Technologies (11 papers), RNA Research and Splicing (10 papers), Cell Image Analysis Techniques (7 papers), Genomics and Chromatin Dynamics (7 papers), Optical Coherence Tomography Applications (4 papers) and Advanced X-ray Imaging Techniques (4 papers). The work is most often cited by research in Biophysics (863 citations), Atomic and Molecular Physics, and Optics (1.6k citations), Radiation (390 citations), Molecular Biology (2.5k citations) and Acoustics and Ultrasonics (31 citations). Mustafa Mir has collaborated with scholars based in United States, China and Spain. Frequent co-authors include Xavier Darzacq, Gabriel Popescu, Alexander Emelyanov, Dmitry V. Fyodorov, Gary H. Karpen, Amy R. Strom, David T. McSwiggen, Robert Tjian, Huafeng Ding and Basanta Bhaduri. Their work appears in journals such as Biomedical Optics Express, Optics Express, Scientific Reports, Advanced Healthcare Materials and Genes & Development.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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