Lukas Habegger

42.9k citations

21 papers · 2.3k indexed · 1 hit paper · h-index 17

Co-authors: Mark Gerstein M Snyder Joel Rozowsky Andrea Sboner Evan K. Maxwell Jeffrey G. Reid Sherman M. Weissman Colm O’Dushlaine
Topics: Genomic variations and chromosomal abnormalities (8 papers)Genomics and Phylogenetic Studies (7 papers)Genomics and Rare Diseases (5 papers)
Cited by: Cancer Research Genetics Molecular Biology
Journals: Science Proceedings of the National Academy of Sciences Nature Genetics
Partner nations: United States Russia United Kingdom

In The Last Decade

Lukas Habegger

21 papers receiving 2.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Computationally efficient whole-genome regression for quantitative and binary traits

2021 512 citations Joelle Mbatchou, Leland Barnard et al. Nature Genetics profile →

Peers

Countries citing papers authored by Lukas Habegger

Since Specialization

Citations

This map shows the geographic impact of Lukas Habegger's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Lukas Habegger with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Lukas Habegger more than expected).

Fields of papers citing papers by Lukas Habegger

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Lukas Habegger. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Lukas Habegger. The network helps show where Lukas Habegger may publish in the future.

Co-authorship network of co-authors of Lukas Habegger

This figure shows the co-authorship network connecting the top 25 collaborators of Lukas Habegger. A scholar is included among the top collaborators of Lukas Habegger based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Lukas Habegger. Lukas Habegger is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Computationally efficient whole-genome regression for quantitative and binary traitsbreakdown → 2021 ·Nature Genetics ·Joelle Mbatchou,Leland Barnard,Joshua Backman,Anthony Marcketta,Jack A. Kosmicki,Andrey Ziyatdinov,Christian Benner,Colm O’Dushlaine,Mathew Barber,Boris Boutkov,Lukas Habegger,Manuel A. R. Ferreira,Aris Baras,Jeffrey G. Reid,Gonçalo R. Abecasis,Evan K. Maxwell,Jonathan Marchini	512
2	Medical manifestations and health care utilization among adult MyCode participants with neurodevelopmental psychiatric copy number variants 2021 ·Genetics in Medicine ·Brenda Finucane,Matthew T. Oetjens,(unknown),Scott M. Myers,Ciarán Fisher,Lukas Habegger,Evan K. Maxwell,Jeffrey G. Reid,David H. Ledbetter,H. Lester Kirchner,Alastair J. Martin	5
3	CLAMMS: a scalable algorithm for calling common and rare copy number variants from exome sequencing data 2015 ·Bioinformatics ·Jonathan S. Packer,Evan K. Maxwell,Colm O’Dushlaine,Alexander Lopez,Frederick E. Dewey,(unknown),Aris Baras,John D. Overton,Lukas Habegger,Jeffrey G. Reid	50
4	Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division 2013 ·Genome Research ·Alexej Abyzov,Rebecca C. Iskow,Ömer Gökçümen,(unknown),Suganthi Balasubramanian,Baikang Pei,Lukas Habegger,Charles Lee,Mark Gerstein	37
5	Accurate Identification and Analysis of Human mRNA Isoforms Using Deep Long Read Sequencing 2013 ·G3 Genes Genomes Genetics ·Hagen Tilgner,Debasish Raha,Lukas Habegger,Mohammed Mohi-Ud-Din,Mark Gerstein,M Snyder	51
6	IQSeq: Integrated Isoform Quantification Analysis Based on Next-Generation Sequencing 2012 ·PLoS ONE ·Jiang Du,Jing Leng,Lukas Habegger,Andrea Sboner,Drew McDermott,Mark Gerstein	6
7	The GENCODE pseudogene resource 2012 ·Genome biology ·Baikang Pei,Cristina Sisu,Adam Frankish,Cédric Howald,Lukas Habegger,Xinmeng Jasmine Mu,Rachel Harte,Suganthi Balasubramanian,Andrea Tanzer,Mark Diekhans,Alexandre Reymond,Tim Hubbard,Jennifer Harrow,Mark Gerstein	251
8	Regulatory element copy number differences shape primate expression profiles 2012 ·Proceedings of the National Academy of Sciences ·Rebecca C. Iskow,Ömer Gökçümen,Alexej Abyzov,Joanna Malukiewicz,Qihui Zhu,(unknown),Athma A. Pai,Ryan E. Mills,Lukas Habegger,Darren A. Cusanovich,Meagan Rubel,George H. Perry,Mark Gerstein,Anne C. Stone,Yoav Gilad,Charles Lee	22
9	VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment 2012 ·Bioinformatics ·Lukas Habegger,Suganthi Balasubramanian,David Ziyou Chen,Ekta Khurana,Andrea Sboner,Arif Harmanci,Joel Rozowsky,Declan Clarke,M Snyder,Mark Gerstein	50
10	Gene inactivation and its implications for annotation in the era of personal genomics 2011 ·Genes & Development ·Suganthi Balasubramanian,Lukas Habegger,Adam Frankish,Daniel G. MacArthur,Rachel Harte,Chris Tyler‐Smith,Jennifer Harrow,Mark Gerstein	22
11	Performance comparison of whole-genome sequencing platforms 2011 ·Nature Biotechnology ·Hugo Y. K. Lam,Michael J. Clark,Rui Chen,Rong Chen,Georges Natsoulis,Maeve O’Huallachain,Frederick E. Dewey,Lukas Habegger,Euan A. Ashley,Mark Gerstein,Atul J. Butte,Hanlee P. Ji,M Snyder	220
12	Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing 2010 ·Proceedings of the National Academy of Sciences ·Jia Qian Wu,Lukas Habegger,Parinya Noisa,Anna Szekely,Caihong Qiu,Stephen Hutchison,Debasish Raha,Michael D. Miller,Haifan Lin,Sherman M. Weissman,Wei Cui,Mark Gerstein,M Snyder	150
13	Variation in Transcription Factor Binding Among Humans 2010 ·Science ·Maya Kasowski,Fabian Grubert,Christopher Heffelfinger,Manoj Hariharan,(unknown),Sebastian M. Waszak,Lukas Habegger,Joel Rozowsky,Minyi Shi,Alexander E. Urban,Mi-Young Hong,Konrad J. Karczewski,Wolfgang Huber,Sherman M. Weissman,Mark Gerstein,Jan O. Korbel,M Snyder	423
14	FusionSeq: a modular framework for finding gene fusions by analyzing paired-end RNA-sequencing data 2010 ·Genome biology ·Andrea Sboner,Lukas Habegger,Dorothee Pflueger,Stéphane Terry,David Ziyou Chen,Joel Rozowsky,Ashutosh Tewari,Naoki Kitabayashi,B.J. Moss,Mark S. Chee,Francesca Demichelis,Mark A. Rubin,Mark Gerstein	110
15	Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing 2010 ·Genome Research ·Dorothee Pflueger,Stéphane Terry,Andrea Sboner,Lukas Habegger,Raquel Esgueva,(unknown),Maria A. Svensson,Naoki Kitabayashi,B.J. Moss,Theresa Y. MacDonald,Xuhong Cao,Terrence R. Barrette,Ashutosh Tewari,Mark S. Chee,Arul M. Chinnaiyan,David S. Rickman,Francesca Demichelis,Mark Gerstein,Mark A. Rubin	157
16	Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays 2010 ·BMC Genomics ·Ashish Agarwal,David Koppstein,Joel Rozowsky,Andrea Sboner,Lukas Habegger,LaDeana Hillier,Rajkumar Sasidharan,V Reinke,R Waterston,Mark Gerstein	83
17	RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries 2010 ·Bioinformatics ·Lukas Habegger,Andrea Sboner,Tara A. Gianoulis,Joel Rozowsky,Ashish Agarwal,M Snyder,Mark Gerstein	79
18	Rational proteomics of PKD1. I. Modeling the three dimensional structure and ligand specificity of the C_lectin binding domain of Polycystin-1. 2007 ·Journal of Molecular Modeling ·В. З. Плетнев,Robert Huether,Lukas Habegger,(unknown),William L. Duax	5
19	Rational genomics I: Antisense open reading frames and codon bias in short‐chain oxido reductase enzymes and the evolution of the genetic code 2005 ·Proteins Structure Function and Bioinformatics ·William L. Duax,Robert Huether,В. З. Плетнев,David A. Langs,A. Addlagatta,(unknown),Lukas Habegger,(unknown)	12
20	Determining Structure and Function of Steroid Dehydrogenase Enzymes by Sequence Analysis, Homology Modeling, and Rational Mutational Analysis 2005 ·Annals of the New York Academy of Sciences ·William L. Duax,James L. Thomas,В. З. Плетнев,A. Addlagatta,Robert Huether,Lukas Habegger,Charles M. Weeks	18

About Lukas Habegger

Lukas Habegger is a scholar working on Cancer Research, Genetics and Molecular Biology, having authored 21 papers that have together received 2.3k indexed citations. Recurring topics across this work include Genomic variations and chromosomal abnormalities (8 papers), Genomics and Phylogenetic Studies (7 papers) and Genomics and Rare Diseases (5 papers). The work is most often cited by research in Cancer Research (538 citations), Genetics (840 citations) and Molecular Biology (1.5k citations). Lukas Habegger has collaborated with scholars based in United States, Russia and United Kingdom. Frequent co-authors include Mark Gerstein, M Snyder, Joel Rozowsky, Andrea Sboner, Evan K. Maxwell, Jeffrey G. Reid, Sherman M. Weissman, Colm O’Dushlaine, Aris Baras and Boris Boutkov. Their work appears in journals such as Science, Proceedings of the National Academy of Sciences and Nature Genetics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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