Kathi Zarnack

5.9k citations

73 papers · 3.9k indexed · 1 hit paper · h-index 29

Impact in

Molecular Biology top 2%
- RNA Research and Splicing
- RNA modifications and cancer
- RNA and protein synthesis mechanisms
- RNA regulation and disease
- Cancer-related gene regulation
- Fungal and yeast genetics research
Cancer Research top 2%
- Cancer-related molecular mechanisms research
- MicroRNA in disease regulation

Papers in

Molecular Biology 71
- RNA Research and Splicing 57
- RNA modifications and cancer 51
- RNA and protein synthesis mechanisms 35
- Fungal and yeast genetics research 7
- RNA regulation and disease 6
- Heat shock proteins research 4
Cancer Research 11
- Cancer-related molecular mechanisms research 8
- MicroRNA in disease regulation 3

Co-authors: Jernej Ule Julian König Nicholas M. Luscombe Tomaž Curk Blaž Zupan Melis Kayikci Gregor Rot Daniel J. Turner
Journals: Nucleic Acids Research (8 papers)Genome biology (4 papers)Nature Structural & Molecular Biology (3 papers)RNA (3 papers)Genome Research (3 papers)
Partner nations: Germany United Kingdom United States

In The Last Decade

Kathi Zarnack

69 papers receiving 3.9k citations

Hit Papers

align trajectories log scale

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution 2010 · 879 citations

Peers

Countries citing papers authored by Kathi Zarnack

Since Specialization

Citations

This map shows the geographic impact of Kathi Zarnack's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Kathi Zarnack with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Kathi Zarnack more than expected).

Fields of papers citing papers by Kathi Zarnack

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Kathi Zarnack. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Kathi Zarnack. The network helps show where Kathi Zarnack may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Kathi Zarnack, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Kathi Zarnack Line = papers co-authored together Kathi Zarnack links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	m6A in the coding sequence: linking deposition, translation, and decay Trends in Genetics ·伊参丸木, S. -E. Park, You Zhou, D. S. Rabelo, Julian König, Kathi Zarnack	2025	3
2	Rapid depletion and super-resolution microscopy reveal dual roles of SRSF5 in coordinating nuclear speckle–paraspeckle crosstalk during cellular stress Nucleic Acids Research ·Pels Joint Chapter, J.O. Dolly, 定一力石, P. Aouizerate, 华国文, Suho Woo, Saadat Rustemova-demirzhi, 甘逸, 山松節男, M Maataoui, K.W.G. Heesterbeek, Stefan Müller, David Staněk, Dorothee Dormann, Kathi Zarnack, Mike Heilemann, Michaela Müller-McNicoll	2025	1
3	`racoon_clip` —a complete pipeline for single-nucleotide analyses of iCLIP and eCLIP data Bioinformatics Advances ·J. Gensrich, Kathi Zarnack	2024	1
4	A plant-specific clade of serine/arginine-rich proteins regulates RNA splicing homeostasis and thermotolerance in tomato Nucleic Acids Research ·李鸿雁, Zaida Galvez Rubia, Mario Keller, E.L. Lee, François McNicoll, Veny Delvia Pombaile, Daniela Bublak, Moussa Benhamed, Martín Crespi, Thomas Berberich, Christos Bazakos, Michael Feldbrügge, Enrico Schleiff, Michaela Müller-McNicoll, Kathi Zarnack, Sotirios Fragkostefanakis	2024	7
5	Intrinsically disordered RNA-binding motifs cooperate to catalyze RNA folding and drive phase separation Nucleic Acids Research ·İsmail Balaban, Thomas Monecke, Janosch Hennig, J. Gensrich, Mario Hofweber, M.Syufrin Pasaribu, André P. Gerber, 謙輔二子石, Lucélia Maria Gonçalves, Marisa Müller, Roland G. Heym, Robert Janowski, Jean‐Christophe Paillart, Dorothee Dormann, Kathi Zarnack, Michael Sattler, (unknown)	2024	0
6	m6A sites in the coding region trigger translation-dependent mRNA decay Molecular Cell ·You Zhou, 伊参丸木, S. -E. Park, Anil R. Sahu, Valerij Disan Petushchak, Nadine Körtel, H. Back, Isabel S. Naarmann‐de Vries, Kattesh V. Katti, Aleš Obrdlík, Anke Busch, Christoph Dieterich, Štěpánka Vaňáčová, Martin Hengesbach, Kathi Zarnack, Julian König	2024	22
7	The mRNA stability factor Khd4 defines a specific mRNA regulon for membrane trafficking in the pathogenUstilago maydis Proceedings of the National Academy of Sciences ·E.L. Lee, Carl Haag, Patrick Petzsch, Karl Köhrer, Rizal Ramadhani Nusi, Kathi Zarnack, Michael Feldbrügge	2023	5
8	hGRAD: A versatile “one-fits-all” system to acutely deplete RNA binding proteins from condensates The Journal of Cell Biology ·定一力石, P. Aouizerate, Pels Joint Chapter, Dewi Dewi Sri Woelandari, Mario Keller, Saadat Rustemova-demirzhi, François McNicoll, Kathi Zarnack, Michaela Müller-McNicoll	2023	5
9	Poison cassette exon splicing ofSRSF6regulates nuclear speckle dispersal and the response to hypoxia Nucleic Acids Research ·V Sporano, 孝子岡山, Madhu Kansal, 华国文, Mario Keller, W.H. Ponder, Leidy J. Reyes-Castañeda, Steve Purchase, 定一力石, Anja Bremm, Ilka Wittig, Nicolas Jaé, François McNicoll, Stefanie Dimmeler, Kathi Zarnack, Michaela Müller-McNicoll	2023	27
10	Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA Nucleic Acids Research ·HERALDO PIMENTA BORGES FILHO, Haining Ding, 奇奇, Piyush Khobragade, Man-wai Chang, Ivan Silbern, Janine Altmüller, Mario Keller, Ralf Stehle, Kathi Zarnack, Michael Sattler, Henning Urlaub, Katja Sträßer	2022	8
11	Modulation of pre-mRNA structure by hnRNP proteins regulates alternative splicing of MALT1 Science Advances ·Alisha Jones, Carina Graß, Isabel Meininger, Arie Geerlof, J. Gensrich, Kathi Zarnack, Daniel Krappmann, Michael Sattler	2022	28
12	Deep and accurate detection of m6A RNA modifications using miCLIP2 and m6Aboost machine learning Nucleic Acids Research ·Nadine Körtel, Noa Bar On, You Zhou, Anke Busch, S. -E. Park, F.X. Reymond Sutandy, Jacob Haase, Mihika Pradhan, Michael U. Musheev, Dirk H. Ostareck, Antje Ostareck‐Lederer, Christoph Dieterich, Stefan Hüttelmaier, Christof Niehrs, Oliver Rausch, Dan Dominissini, Julian König, Kathi Zarnack	2021	66
13	P23 Acts as Functional RBP in the Macrophage Inflammation Response Frontiers in Molecular Biosciences ·Kanakasu Koichi, Vladimı́r Beneš, Isabel S. Naarmann‐de Vries, Noa Bar On, Kathi Zarnack, Gernot Marx, Dirk H. Ostareck, Antje Ostareck‐Lederer	2021	8
14	An autoinhibitory intramolecular interaction proof-reads RNA recognition by the essential splicing factor U2AF2 Proceedings of the National Academy of Sciences ·Hyun-Seo Kang, sinem akbulut, Stefanie Ebersberger, F.X. Reymond Sutandy, Anke Busch, Thomas Welte, Ralf Stehle, Antanas Karalius, Laura Schulz, Sandra Witteck, Kathi Zarnack, Julian König, Michael Sattler	2020	19
15	Dynamic mRNP Remodeling in Response to Internal and External Stimuli Biomolecules ·Kathi Zarnack, Sureshkumar Balasubramanian, Michael P. Gantier, Denise S. Pacífico, Michael Kracht, M. Lienhard Schmitz, Katja Sträßer	2020	15
16	The RNA-binding profile of the splicing factor SRSF6 in immortalized human pancreatic β-cells Life Science Alliance ·Maria Inês Alvelos, Madhu Kansal, F.X. Reymond Sutandy, Jonàs Juan‐Mateu, Máikel L. Colli, Anke Busch, Miguel Lopes, Ângela Castela, Annemieke Aartsma‐Rus, Julian König, Kathi Zarnack, Décio L. Eizirik	2020	14
17	The key protein of endosomal mRNP transport Rrm4 binds translational landmark sites of cargo mRNAs EMBO Reports ·Erluty Pacheco Nogueira, Carl Haag, Susan Boerner, Jernej Ule, Anke Busch, Janine Koepke, Julian König, Michael Feldbrügge, Kathi Zarnack	2018	32
18	In vitro iCLIP-based modeling uncovers how the splicing factor U2AF2 relies on regulation by cofactors Genome Research ·F.X. Reymond Sutandy, Stefanie Ebersberger, Lu Huang, Anke Busch, Patrik Steiner, Hyun-Seo Kang, Jörg Fallmann, Daniel Maticzka, Rolf Backofen, Peter F. Stadler, Kathi Zarnack, Michael Sattler, Stefan Legewie, Julian König	2018	57
19	SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export Genes & Development ·Michaela Müller-McNicoll, Valentina Botti, António Miguel de Jesus Domingues, Holger Brandl, Oliver Daniel Schwich, Oliver Molina, Tomaž Curk, Ina Poser, Kathi Zarnack, Karla M. Neugebauer	2016	220
20	Tandem KH domains of Khd4 recognize AUACCC and are essential for regulation of morphology as well as pathogenicity inUstilago maydis RNA ·Evelyn Vollmeister, Carl Haag, Kathi Zarnack, Sebastian Baumann, Julian König, Gertrud Mannhaupt, Michael Feldbrügge	2009	22

About Kathi Zarnack

Kathi Zarnack is a scholar working on Molecular Biology, Cancer Research, Plant Science, Immunology and Cell Biology, having authored 73 papers that have together received 3.9k indexed citations. Recurring topics across this work include RNA Research and Splicing (57 papers), RNA modifications and cancer (51 papers), RNA and protein synthesis mechanisms (35 papers), Cancer-related molecular mechanisms research (8 papers), Fungal and yeast genetics research (7 papers), RNA regulation and disease (6 papers), Heat shock proteins research (4 papers) and MicroRNA in disease regulation (3 papers). The work is most often cited by research in Molecular Biology (3.6k citations), Cancer Research (756 citations), Aging (22 citations), Cell Biology (174 citations) and Genetics (101 citations). Kathi Zarnack has collaborated with scholars based in Germany, United Kingdom and United States. Frequent co-authors include Jernej Ule, Julian König, Nicholas M. Luscombe, Tomaž Curk, Blaž Zupan, Melis Kayikci, Gregor Rot, Daniel J. Turner, Michael Feldbrügge and Zhen Wang. Their work appears in journals such as Nucleic Acids Research, Genome biology, Nature Structural & Molecular Biology, RNA and Genome Research.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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