Jason J. Stephany

2.9k citations

22 papers · 1.7k indexed · 1 hit paper · h-index 17

Molecular Biology top 10%
Genetics top 5%
Virology top 2%
Immunology top 10%
Infectious Diseases top 10%

Co-authors: Douglas M. Fowler Stanley Fields Kenneth A. Matreyek Elizabeth H. Kellogg Carlos L. Araya Sarel J. Fleishman David Baker Melissa A. Chiasson
Topics: CRISPR and Genetic Engineering (6 papers)RNA and protein synthesis mechanisms (6 papers)HIV Research and Treatment (4 papers)
Cited by: Virology Molecular Biology Immunology
Journals: Nucleic Acids Research Journal of Biological Chemistry Nature Communications
Partner nations: United States Canada Switzerland

In The Last Decade

Jason J. Stephany

22 papers receiving 1.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

High-resolution mapping of protein sequence-function relationships

2010 384 citations Douglas M. Fowler, Carlos L. Araya et al. Nature Methods profile →

Peers

Countries citing papers authored by Jason J. Stephany

Since Specialization

Citations

This map shows the geographic impact of Jason J. Stephany's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jason J. Stephany with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jason J. Stephany more than expected).

Fields of papers citing papers by Jason J. Stephany

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jason J. Stephany. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jason J. Stephany. The network helps show where Jason J. Stephany may publish in the future.

Co-authorship network of co-authors of Jason J. Stephany

This figure shows the co-authorship network connecting the top 25 collaborators of Jason J. Stephany. A scholar is included among the top collaborators of Jason J. Stephany based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jason J. Stephany. Jason J. Stephany is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Profiling of drug resistance in Src kinase at scale uncovers a regulatory network coupling autoinhibition and catalytic domain dynamics 2023 ·Cell chemical biology ·Sujata Chakraborty,Ethan Ahler,(unknown),Linglan Fang,Zachary E. Potter,Katherine A. Sitko,Jason J. Stephany,Miklós Guttman,Douglas M. Fowler,Dustin J. Maly	12
2	Molecular determinants of Hsp90 dependence of Src kinase revealed by deep mutational scanning 2023 ·Protein Science ·(unknown),Ethan Ahler,Katherine A. Sitko,Jason J. Stephany,Dustin J. Maly,Douglas M. Fowler	5
3	Integrating thousands of PTEN variant activity and abundance measurements reveals variant subgroups and new dominant negatives in cancers 2021 ·Genome Medicine ·Kenneth A. Matreyek,Jason J. Stephany,Ethan Ahler,Douglas M. Fowler	16
4	Suppression of unwanted CRISPR-Cas9 editing by co-administration of catalytically inactivating truncated guide RNAs 2020 ·Nature Communications ·John C. Rose,(unknown),Chris D. Richardson,Jason J. Stephany,Julie Mathieu,(unknown),Jacob E. Corn,Dustin J. Maly,Douglas M. Fowler	43
5	High‐throughput, microscope‐based sorting to dissect cellular heterogeneity 2020 ·Molecular Systems Biology ·(unknown),(unknown),Sanjay Srivatsan,Heather Z Huang,Jason J. Stephany,(unknown),Dana L. Jackson,Weiliang Tang,Sriram Pendyala,Raymond J. Monnat,Cole Trapnell,Emily M. Hatch,Douglas M. Fowler	46
6	Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact 2020 ·eLife ·Melissa A. Chiasson,Nathan Rollins,Jason J. Stephany,Katherine A. Sitko,Kenneth A. Matreyek,Marta Verby,Song Sun,Frederick P. Roth,Daniel DeSloover,Debora S. Marks,Allan E. Rettie,Douglas M. Fowler	55
7	Elucidating the Molecular Determinants of Aβ Aggregation with Deep Mutational Scanning 2019 ·G3 Genes Genomes Genetics ·Vanessa E. Gray,Katherine A. Sitko,(unknown),(unknown),Jason J. Stephany,(unknown),Douglas M. Fowler	21
8	An improved platform for functional assessment of large protein libraries in mammalian cells 2019 ·Nucleic Acids Research ·Kenneth A. Matreyek,Jason J. Stephany,Melissa A. Chiasson,(unknown),Douglas M. Fowler	81
9	A Combined Approach Reveals a Regulatory Mechanism Coupling Src’s Kinase Activity, Localization, and Phosphotransferase-Independent Functions 2019 ·Molecular Cell ·Ethan Ahler,Ames C. Register,Sujata Chakraborty,Linglan Fang,(unknown),Katherine A. Sitko,Rama Subba Rao Vidadala,(unknown),Martin Golkowski,Hannah Gelman,Jason J. Stephany,Alan F. Rubin,E.A. Merritt,Douglas M. Fowler,Dustin J. Maly	38
10	Multiplex assessment of protein variant abundance by massively parallel sequencing 2018 ·Nature Genetics ·Kenneth A. Matreyek,Lea M. Starita,Jason J. Stephany,Beth Martin,Melissa A. Chiasson,Vanessa E. Gray,Martin Kircher,Arineh Khechaduri,Jennifer N. Dines,Ronald J. Hause,Smita Bhatia,William E. Evans,Mary V. Relling,Wenjian Yang,Jay Shendure,Douglas M. Fowler	254
11	A platform for functional assessment of large variant libraries in mammalian cells 2017 ·Nucleic Acids Research ·Kenneth A. Matreyek,Jason J. Stephany,Douglas M. Fowler	90
12	Rapidly inducible Cas9 and DSB-ddPCR to probe editing kinetics 2017 ·Nature Methods ·John C. Rose,Jason J. Stephany,William J. Valente,(unknown),Ha V. Dang,Jason H. Bielas,Dustin J. Maly,Douglas M. Fowler	77
13	Rheostatic Control of Cas9-Mediated DNA Double Strand Break (DSB) Generation and Genome Editing 2017 ·ACS Chemical Biology ·John C. Rose,Jason J. Stephany,(unknown),Douglas M. Fowler,Dustin J. Maly	12
14	Protocol for rapidly inducible Cas9 and DSB-ddPCR 2017 ·Protocol Exchange ·Jason J. Stephany,John C. Rose,William J. Valente,(unknown),Ha V. Dang,Jason H. Bielas,Dustin J. Maly,Douglas M. Fowler	2
15	Measuring the activity of protein variants on a large scale using deep mutational scanning 2014 ·Nature Protocols ·Douglas M. Fowler,Jason J. Stephany,Stanley Fields	119
16	Engineering A-kinase Anchoring Protein (AKAP)-selective Regulatory Subunits of Protein Kinase A (PKA) through Structure-based Phage Selection 2013 ·Journal of Biological Chemistry ·Matthew G. Gold,Douglas M. Fowler,Christopher K. Means,Catherine Pawson,Jason J. Stephany,Lorene K. Langeberg,Stanley Fields,John D. Scott	38
17	Suppression of statin effectiveness by copper and zinc in yeast and human cells 2010 ·Molecular BioSystems ·Douglas M. Fowler,Sara J. Cooper,Jason J. Stephany,(unknown),Sven Nelson,Stanley Fields	14
18	High-resolution mapping of protein sequence-function relationshipsbreakdown → 2010 ·Nature Methods ·Douglas M. Fowler,Carlos L. Araya,Sarel J. Fleishman,Elizabeth H. Kellogg,Jason J. Stephany,David Baker,Stanley Fields	384
19	Gag-Specific CD8+ T Lymphocytes Recognize Infected Cells before AIDS-Virus Integration and Viral Protein Expression 2007 ·The Journal of Immunology ·Jonah B. Sacha,Chungwon Chung,Eva G. Rakasz,Sean P. Spencer,(unknown),Alexander T. Bean,Won-Hee Lee,Benjamin J. Burwitz,Jason J. Stephany,John T. Loffredo,David B. Allison,Sama Adnan,(unknown),Nancy A. Wilson,Thomas C. Friedrich,Jeffrey D. Lifson,Otto O. Yang,David I. Watkins	190
20	The Antiviral Efficacy of Simian Immunodeficiency Virus-Specific CD8 ⁺ T Cells Is Unrelated to Epitope Specificity and Is Abrogated by Viral Escape 2006 ·Journal of Virology ·John T. Loffredo,Benjamin J. Burwitz,Eva G. Rakasz,Sean P. Spencer,Jason J. Stephany,(unknown),Sarah R. Martin,Jason S. Reed,Shari M. Piaskowski,Jessica Furlott,Kim L. Weisgrau,Denise S. Rodrigues,Taeko Soma,Gnankang Sarah Napoé,Thomas C. Friedrich,Nancy A. Wilson,Esper G. Kallás,David I. Watkins	57

About Jason J. Stephany

Jason J. Stephany is a scholar working on Virology, Molecular Biology and Computational Theory and Mathematics, having authored 22 papers that have together received 1.7k indexed citations. Recurring topics across this work include CRISPR and Genetic Engineering (6 papers), RNA and protein synthesis mechanisms (6 papers) and HIV Research and Treatment (4 papers). The work is most often cited by research in Virology (345 citations), Molecular Biology (1.2k citations) and Immunology (307 citations). Jason J. Stephany has collaborated with scholars based in United States, Canada and Switzerland. Frequent co-authors include Douglas M. Fowler, Stanley Fields, Kenneth A. Matreyek, Elizabeth H. Kellogg, Carlos L. Araya, Sarel J. Fleishman, David Baker, Melissa A. Chiasson, Dustin J. Maly and Vanessa E. Gray. Their work appears in journals such as Nucleic Acids Research, Journal of Biological Chemistry and Nature Communications.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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