Ilyas Yildirim

2.2k total citations
41 papers, 1.7k citations indexed

About

Ilyas Yildirim is a scholar working on Molecular Biology, Cellular and Molecular Neuroscience and Cardiology and Cardiovascular Medicine. According to data from OpenAlex, Ilyas Yildirim has authored 41 papers receiving a total of 1.7k indexed citations (citations by other indexed papers that have themselves been cited), including 41 papers in Molecular Biology, 8 papers in Cellular and Molecular Neuroscience and 3 papers in Cardiology and Cardiovascular Medicine. Recurrent topics in Ilyas Yildirim's work include RNA and protein synthesis mechanisms (27 papers), RNA Research and Splicing (19 papers) and DNA and Nucleic Acid Chemistry (18 papers). Ilyas Yildirim is often cited by papers focused on RNA and protein synthesis mechanisms (27 papers), RNA Research and Splicing (19 papers) and DNA and Nucleic Acid Chemistry (18 papers). Ilyas Yildirim collaborates with scholars based in United States, Poland and United Kingdom. Ilyas Yildirim's co-authors include Douglas H. Turner, Matthew D. Disney, Scott D. Kennedy, George C. Schatz, Harry A. Stern, Ryszard Kierzek, Jessica L. Childs‐Disney, Kye Won Wang, HaJeung Park and Thomas V. O’Halloran and has published in prestigious journals such as Science, Proceedings of the National Academy of Sciences and Journal of the American Chemical Society.

In The Last Decade

Ilyas Yildirim

41 papers receiving 1.7k citations

Peers

Countries citing papers authored by Ilyas Yildirim

Since Specialization

Citations

This map shows the geographic impact of Ilyas Yildirim's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ilyas Yildirim with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ilyas Yildirim more than expected).

Fields of papers citing papers by Ilyas Yildirim

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ilyas Yildirim. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ilyas Yildirim. The network helps show where Ilyas Yildirim may publish in the future.

Co-authorship network of co-authors of Ilyas Yildirim

This figure shows the co-authorship network connecting the top 25 collaborators of Ilyas Yildirim. A scholar is included among the top collaborators of Ilyas Yildirim based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Ilyas Yildirim. Ilyas Yildirim is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Conformational dynamics of RNA G4C2 and G2C4 repeat expansions causing ALS/FTD using NMR and molecular dynamics studies 2023 ·Nucleic Acids Research ·(unknown), (unknown), Jessica L. Childs‐Disney, Ilyas Yildirim, Matthew D. Disney	5
2	Dynamic docking of small molecules targeting RNA CUG repeats causing myotonic dystrophy type 1 2022 ·Biophysical Journal ·Kye Won Wang, (unknown), (unknown), Ilyas Yildirim	3
3	Evaluating Geometric Definitions of Stacking for RNA Dinucleoside Monophosphates Using Molecular Mechanics Calculations 2022 ·Journal of Chemical Theory and Computation ·(unknown), (unknown), David J. Wales, Ilyas Yildirim	6
4	Computational Investigation of Bending Properties of RNA AUUCU, CCUG, CAG, and CUG Repeat Expansions Associated With Neuromuscular Disorders 2022 ·Frontiers in Molecular Biosciences ·(unknown), Ilyas Yildirim	2
5	Design of a small molecule that stimulates vascular endothelial growth factor A enabled by screening RNA fold–small molecule interactions 2020 ·Nature Chemistry ·Hafeez S. Haniff, Laurent Knerr, Xiaohui Liu, Gogce Crynen, Jonas Boström, Daniel Abegg, Alexander Adibekian, (unknown), Kye Won Wang, Michael D. Cameron, Ilyas Yildirim, Malin Lemurell, Matthew D. Disney	47
6	A Small Molecule that Binds an RNA Repeat Expansion Stimulates Its Decay via the Exosome Complex 2020 ·Cell chemical biology ·Alicia J. Angelbello, Raphael I. Benhamou, Suzanne G. Rzuczek, Shruti Choudhary, (unknown), Jonathan L. Chen, Madhuparna Roy, Kye Won Wang, Ilyas Yildirim, Albert S. Jun, Charles A. Thornton, Matthew D. Disney	25
7	Small-molecule targeted recruitment of a nuclease to cleave an oncogenic RNA in a mouse model of metastatic cancer 2020 ·Proceedings of the National Academy of Sciences ·Matthew G. Costales, Haruo Aikawa, Yue Li, Jessica L. Childs‐Disney, Daniel Abegg, Dominic G. Hoch, Sai Pradeep Velagapudi, (unknown), Tanya Khan, Kye Won Wang, Ilyas Yildirim, Alexander Adibekian, Eric T. Wang, Matthew D. Disney	135
8	Improvement of RNA Simulations with Torsional Revisions of the AMBER Force Field 2019 ·Methods in molecular biology ·Ilyas Yildirim	3
9	The Hairpin Form of r(G4C2)exp in c9ALS/FTD Is Repeat-Associated Non-ATG Translated and a Target for Bioactive Small Molecules 2018 ·Cell chemical biology ·(unknown), Andrei Ursu, Jessica L. Childs‐Disney, (unknown), (unknown), Viachaslau Bernat, Suzanne G. Rzuczek, Rita Fuerst, Yong‐Jie Zhang, Tania F. Gendron, Ilyas Yildirim, Brendan G. Dwyer, Joseph E. Rice, Leonard Petrucelli, Matthew D. Disney	79
10	Improving Computational Predictions of Single-Stranded RNA Tetramers with Revised α/γ Torsional Parameters for the Amber Force Field 2017 ·The Journal of Physical Chemistry B ·David J. Wales, Ilyas Yildirim	24
11	Allosteric transcriptional regulation via changes in the overall topology of the core promoter 2015 ·Science ·(unknown), (unknown), Ilyas Yildirim, George C. Schatz, Alfonso Mondragón, Thomas V. O’Halloran	119
12	Computational Investigation of RNA CUG Repeats Responsible for Myotonic Dystrophy 1 2015 ·Journal of Chemical Theory and Computation ·Ilyas Yildirim, Debayan Chakraborty, Matthew D. Disney, David J. Wales, George C. Schatz	22
13	Interplay of LNA and 2′-O-Methyl RNA in the Structure and Thermodynamics of RNA Hybrid Systems: A Molecular Dynamics Study Using the Revised AMBER Force Field and Comparison with Experimental Results 2014 ·The Journal of Physical Chemistry B ·Ilyas Yildirim, Elżbieta Kierzek, Ryszard Kierzek, George C. Schatz	49
14	Structure of the Myotonic Dystrophy Type 2 RNA and Designed Small Molecules That Reduce Toxicity 2013 ·ACS Chemical Biology ·Jessica L. Childs‐Disney, Ilyas Yildirim, HaJeung Park, Jeremy R. Lohman, Lirui Guan, Tuan Anh Tran, Partha S. Sarkar, George C. Schatz, Matthew D. Disney	59
15	Methods to enable the design of bioactive small molecules targeting RNA 2013 ·Organic & Biomolecular Chemistry ·Matthew D. Disney, Ilyas Yildirim, Jessica L. Childs‐Disney	53
16	Benchmarking AMBER Force Fields for RNA: Comparisons to NMR Spectra for Single-Stranded r(GACC) Are Improved by Revised χ Torsions 2011 ·The Journal of Physical Chemistry B ·Ilyas Yildirim, Harry A. Stern, (unknown), Scott D. Kennedy, Douglas H. Turner	85
17	An RNA Molecular Switch: Intrinsic Flexibility of 23S rRNA Helices 40 and 68 5'-UAA/5'-GAN Internal Loops Studied by Molecular Dynamics Methods. 2010 ·PubMed ·Kamila Réblová, (unknown), Petr Kulhánek, (unknown), David H. Mathews, (unknown), Ilyas Yildirim, Douglas H. Turner, Jiřı́ Šponer	34
18	Contributions of Stacking, Preorganization, and Hydrogen Bonding to the Thermodynamic Stability of Duplexes between RNA and 2′- O -Methyl RNA with Locked Nucleic Acids 2009 ·Biochemistry ·Elżbieta Kierzek, Anna Pasternak, (unknown), Zofia Gdaniec, Ilyas Yildirim, Douglas H. Turner, Ryszard Kierzek	42
19	Stacking Effects on Local Structure in RNA: Changes in the Structure of Tandem GA Pairs when Flanking GC Pairs Are Replaced by isoG−isoC Pairs 2007 ·The Journal of Physical Chemistry B ·Gang Chen, Ryszard Kierzek, Ilyas Yildirim, Thomas R. Krugh, Douglas H. Turner, Scott D. Kennedy	19
20	RNA Challenges for Computational Chemists 2005 ·Biochemistry ·Ilyas Yildirim, Douglas H. Turner	42

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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