Gordon Saksena

112.6k citations

15 papers · 3.0k indexed · 2 hit papers · h-index 8

Co-authors: Gad Getz Michael S. Lawrence Scott L. Carter Matthew Meyerson Stacey Gabriel Rameen Beroukhim Steven E. Schumacher Craig H. Mermel
Topics: Cancer Genomics and Diagnostics (7 papers)Genetic factors in colorectal cancer (4 papers)RNA modifications and cancer (3 papers)
Cited by: Cancer Research Oncology Molecular Biology
Journals: Nature Communications Nature Genetics Blood
Partner nations: United States United Kingdom Spain

In The Last Decade

Gordon Saksena

15 papers receiving 2.9k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Pan-cancer patterns of somatic copy number alteration

2013 1.2k citations Travis Zack, Steven E. Schumacher et al. Nature Genetics profile →
An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers

2013 832 citations Steven A. Roberts, Michael S. Lawrence et al. Nature Genetics profile →

Peers

Countries citing papers authored by Gordon Saksena

Since Specialization

Citations

This map shows the geographic impact of Gordon Saksena's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Gordon Saksena with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Gordon Saksena more than expected).

Fields of papers citing papers by Gordon Saksena

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Gordon Saksena. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Gordon Saksena. The network helps show where Gordon Saksena may publish in the future.

Co-authorship network of co-authors of Gordon Saksena

This figure shows the co-authorship network connecting the top 25 collaborators of Gordon Saksena. A scholar is included among the top collaborators of Gordon Saksena based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Gordon Saksena. Gordon Saksena is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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15 of 15 papers shown

#	Work	Indexed citations
1	Tangent normalization for somatic copy-number inference in cancer genome analysis 2022 ·Bioinformatics ·Galen F. Gao,Coyin Oh,Gordon Saksena,Davy Deng,Lindsay Westlake,Barbara Hill,Michael Reich,Steven E. Schumacher,Ashton C. Berger,Scott L. Carter,Andrew D. Cherniack,Matthew Meyerson,Barbara Tabak,Rameen Beroukhim,Gad Getz	4
2	Framework for quality assessment of whole genome cancer sequences 2020 ·Nature Communications ·Justin P. Whalley,Ivo Buchhalter,Esther Rheinbay,Keiran Raine,Miranda D. Stobbe,Kortine Kleinheinz,Johannes Werner,Sergi Beltrán,Marta Gut,Daniel Hübschmann,Barbara Hutter,Dimitri Livitz,Marc D. Perry,Mara Rosenberg,Gordon Saksena,Jean-Rémi Trotta,Roland Eils,Daniela S. Gerhard,Peter J. Campbell,Matthias Schlesner	4
3	Abstract 926: Multi-Center Mutation Calling in Multiple Cancers: The MC3 Project 2018 ·Cancer Research ·Kyle Ellrott,(unknown),Gordon Saksena,Kyle R. Covington,Cyriac Kandoth,Chip Stewart,Michael D. McLellan,Heidi J. Sofia,Carolyn M. Hutter,Gad Getz,David A. Wheeler,Li Ding	3
4	Somatic copy number alterations in gastric adenocarcinomas among Asian and Western patients 2017 ·PLoS ONE ·Steven E. Schumacher,Byoung Yong Shim,Giovanni Corso,Min‐Hee Ryu,Yoon‐Koo Kang,Franco Roviello,Gordon Saksena,Shouyong Peng,Ramesh A. Shivdasani,Adam J. Bass,Rameen Beroukhim	48
5	Deletion of ribosomal protein genes is a common vulnerability in human cancer, especially in concert with TP 53 mutations 2017 ·EMBO Molecular Medicine ·Ram Ajore,David M. Raiser,Marie McConkey,Magnus Jöud,Bernd Boidol,Brenton G. Mar,Gordon Saksena,David M. Weinstock,Scott A. Armstrong,Steven R. Ellis,Benjamin L. Ebert,Björn Nilsson	75
6	Deletion of ribosomal protein genes is a common vulnerability in human cancer, especially in concert with 2017 ·DSpace@MIT (Massachusetts Institute of Technology) ·Ram Ajore,David M. Raiser,Marie McConkey,Magnus Jöud,Bernd Boidol,Brenton G. Mar,Gordon Saksena,David M. Weinstock,Scott A. Armstrong,Steven R. Ellis,Benjamin L. Ebert,Björn Nilsson	1
7	Oncotator: Cancer Variant Annotation Tool 2015 ·Human Mutation ·Alex H. Ramos,Lee Lichtenstein,Manaswi Gupta,Michael S. Lawrence,Trevor J. Pugh,Gordon Saksena,Matthew Meyerson,Gad Getz	275
8	A Pan-Cancer Analysis of Transcriptome Changes Associated with Somatic Mutations in U2AF1 Reveals Commonly Altered Splicing Events 2014 ·PLoS ONE ·Angela N. Brooks,Peter S. Choi,Luc de Waal,Tanaz Sharifnia,Marcin Imieliński,Gordon Saksena,Chandra Sekhar Pedamallu,Andrey Sivachenko,Mara Rosenberg,Juliann Chmielecki,Michael S. Lawrence,David S. DeLuca,Gad Getz,Matthew Meyerson	126
9	RNF43 is frequently mutated in colorectal and endometrial cancers 2014 ·Nature Genetics ·Marios Giannakis,Eran Hodis,Xinmeng Jasmine Mu,Mai Yamauchi,Joseph Rosenbluh,Kristian Cibulskis,Gordon Saksena,Michael S. Lawrence,Zhi Rong Qian,Reiko Nishihara,Eliezer M. Van Allen,William C. Hahn,Stacey Gabriel,Eric S. Lander,Gad Getz,Shuji Ogino,Charles S. Fuchs,Levi A. Garraway	332
10	Pan-cancer patterns of somatic copy number alterationbreakdown → 2013 ·Nature Genetics ·Travis Zack,Steven E. Schumacher,Scott L. Carter,Andrew D. Cherniack,Gordon Saksena,Barbara Tabak,Michael S. Lawrence,Cheng‐Zhong Zhang,Jeremiah A. Wala,Craig H. Mermel,Carrie Sougnez,Stacey Gabriel,Bryan Hernandez,Hui Shen,Peter W. Laird,Gad Getz,Matthew Meyerson,Rameen Beroukhim	1243
11	An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancersbreakdown → 2013 ·Nature Genetics ·Steven A. Roberts,Michael S. Lawrence,Leszek J. Klimczak,Sara A. Grimm,David C. Fargo,Petar Stojanov,Adam Kieżun,Gregory V. Kryukov,Scott L. Carter,Gordon Saksena,Shawn Harris,Ruchir Shah,Michael A. Resnick,Gad Getz,Dmitry A. Gordenin	832
12	Increased Local Disorder of DNA Methylation Forms the Basis of High Intra-Leukemic Epigenetic Heterogeneity and Enhances CLL Evolution 2013 ·Blood ·Dan‐Avi Landau,Kendell Clement,Peter Boyle,Michael J. Ziller,Kristen E. Stevenson,Dylan Kotliar,Gordon Saksena,(unknown),Carrie Sougnez,Wandi Zhang,Mahmoud Ghandi,Levi A. Garraway,Stacey Gabriel,Eric S. Lander,Jennifer R. Brown,Donna Neuberg,Nir Hacohen,Gad Getz,Alexander Meissner,Catherine J. Wu	3
13	Reconstructing a Genotype-Phenotype Map In Chronic Lymphocytic Leukemia 2013 ·Blood ·Dylan Kotliar,Dan‐Avi Landau,Oren Litvin,Petar Stojanov,Carrie Sougnez,Gordon Saksena,(unknown),Donna Neuberg,Gad Getz,Jennifer R. Brown,Dana Pe’er,Nir Hacohen,Catherine J. Wu	1
14	Characterization of the DNA Copy-Number Genome in the Blood of Cutaneous T-Cell Lymphoma Patients 2011 ·Journal of Investigative Dermatology ·William M. Lin,Julia M. Lewis,Renata B. Filler,Badri Modi,Kacie R. Carlson,(unknown),(unknown),Gordon Saksena,Sheila Umlauf,Patrick A. Oberholzer,Maria B. Karpova,Gad Getz,Shrikant Mane,Levi A. Garraway,Reinhard Dummer,Carole L. Berger,Richard L. Edelson,Michael Girardi	25
15	Developing Algorithms to Discover Novel Cancer Genes: A look at the challenges and approaches 2011 ·IEEE Signal Processing Magazine ·Gordon Saksena,Craig H. Mermel,Gad Getz	4

About Gordon Saksena

Gordon Saksena is a scholar working on Cancer Research, Pathology and Forensic Medicine and Genetics, having authored 15 papers that have together received 3.0k indexed citations. Recurring topics across this work include Cancer Genomics and Diagnostics (7 papers), Genetic factors in colorectal cancer (4 papers) and RNA modifications and cancer (3 papers). The work is most often cited by research in Cancer Research (1.4k citations), Oncology (793 citations) and Molecular Biology (1.9k citations). Gordon Saksena has collaborated with scholars based in United States, United Kingdom and Spain. Frequent co-authors include Gad Getz, Michael S. Lawrence, Scott L. Carter, Matthew Meyerson, Stacey Gabriel, Rameen Beroukhim, Steven E. Schumacher, Craig H. Mermel, Jeremiah A. Wala and Peter W. Laird. Their work appears in journals such as Nature Communications, Nature Genetics and Blood.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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