Chen-Shan Chin

26.9k total citations · 5 hit papers
34 papers, 8.2k citations indexed

About

Chen-Shan Chin is a scholar working on Molecular Biology, Genetics and Ecology. According to data from OpenAlex, Chen-Shan Chin has authored 34 papers receiving a total of 8.2k indexed citations (citations by other indexed papers that have themselves been cited), including 23 papers in Molecular Biology, 7 papers in Genetics and 5 papers in Ecology. Recurrent topics in Chen-Shan Chin's work include Genomics and Phylogenetic Studies (14 papers), Chromosomal and Genetic Variations (5 papers) and RNA and protein synthesis mechanisms (5 papers). Chen-Shan Chin is often cited by papers focused on Genomics and Phylogenetic Studies (14 papers), Chromosomal and Genetic Variations (5 papers) and RNA and protein synthesis mechanisms (5 papers). Chen-Shan Chin collaborates with scholars based in United States, United Kingdom and Sweden. Chen-Shan Chin's co-authors include James Drake, Alicia Clum, Jonas Korlach, Evan E. Eichler, John Huddleston, Patrick Marks, Alex Copeland, Cheryl Heiner, David H. Alexander and Aaron A. Klammer and has published in prestigious journals such as Nature, Science and New England Journal of Medicine.

In The Last Decade

Chen-Shan Chin

34 papers receiving 8.1k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

2013 3.1k citations Chen-Shan Chin, David H. Alexander et al. Nature Methods profile →
Phased diploid genome assembly with single-molecule real-time sequencing

2016 1.2k citations Chen-Shan Chin, Paul Peluso et al. Nature Methods profile →
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing

2015 629 citations Konstantin Berlin, Sergey Koren et al. Nature Biotechnology profile →
Validation of ITD mutations in FLT3 as a therapeutic target in human acute myeloid leukaemia

2012 542 citations Catherine C. Smith, Qi Wang et al. Nature profile →
The Origin of the Haitian Cholera Outbreak Strain

2010 524 citations Chen-Shan Chin, Andrew Kasarskis et al. profile →

Peers

Countries citing papers authored by Chen-Shan Chin

Since Specialization

Citations

This map shows the geographic impact of Chen-Shan Chin's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Chen-Shan Chin with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Chen-Shan Chin more than expected).

Fields of papers citing papers by Chen-Shan Chin

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Chen-Shan Chin. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Chen-Shan Chin. The network helps show where Chen-Shan Chin may publish in the future.

Co-authorship network of co-authors of Chen-Shan Chin

This figure shows the co-authorship network connecting the top 25 collaborators of Chen-Shan Chin. A scholar is included among the top collaborators of Chen-Shan Chin based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Chen-Shan Chin. Chen-Shan Chin is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Long-read whole-genome analysis of human single cells 2023 ·Nature Communications ·Joanna Hård, Jeff E. Mold, Jesper Eisfeldt, Christian Tellgren‐Roth, (unknown), Ignas Bunikis, Orlando Contreras‐López, Chen-Shan Chin, Jessica Nordlund, Carl‐Johan Rubin, Lars Feuk, Jakob Michaëlsson, Adam Ameur	25
2	Multiscale analysis of pangenomes enables improved representation of genomic diversity for repetitive and clinically relevant genes 2023 ·Nature Methods ·Chen-Shan Chin, Sairam Behera, (unknown), Fritz J. Sedlazeck, Peter H. Sudmant, Justin Wagner, Justin M. Zook	23
3	Amplification-free long-read sequencing reveals unforeseen CRISPR-Cas9 off-target activity 2020 ·Genome biology ·Ida Höijer, (unknown), Sanna Gudmundsson, Chen-Shan Chin, Ignas Bunikis, (unknown), Anastasia Emmanouilidou, Maria Wilbe, Marcel den Hoed, Marie-Louise Bondeson, Lars Feuk, Ulf Gyllensten, Adam Ameur	35
4	Heterogeneous resistance to quizartinib in acute myeloid leukemia revealed by single-cell analysis 2017 ·Blood ·Catherine C. Smith, Amy L. Paguirigan, Grace R. Jeschke, Kimberly C. Lin, Evan Massi, (unknown), Chen-Shan Chin, Saurabh Asthana, Adam B. Olshen, Kevin Travers, Susana Wang, Mark J. Levis, Alexander E. Perl, Jerald P. Radich, Neil P. Shah	120
5	Scaffolding of long read assemblies using long range contact information 2017 ·BMC Genomics ·Jay Ghurye, Mihai Pop, Sergey Koren, Derek M. Bickhart, Chen-Shan Chin	173
6	Long-read sequence assembly of the gorilla genome 2016 ·Science ·David Gordon, John Huddleston, Mark Chaisson, C. Hill, Zev Kronenberg, Katherine M. Munson, Maika Malig, Archana N. Raja, Ian T. Fiddes, LaDeana Hillier, Christopher Dunn, Carl Baker, Joel Armstrong, Mark Diekhans, Benedict Paten, Jay Shendure, Richard K. Wilson, David Haussler, Chen-Shan Chin, Evan E. Eichler	218
7	Phased diploid genome assembly with single-molecule real-time sequencing breakdown → 2016 ·Nature Methods ·Chen-Shan Chin, Paul Peluso, Fritz J. Sedlazeck, Maria Nattestad, Gregory T. Concepcion, Alicia Clum, Christopher Dunn, Ronan C. O’Malley, Rosa Figueroa‐Balderas, Abraham Morales‐Cruz, Grant R. Cramer, Massimo Delledonne, Chongyuan Luo, Joseph R. Ecker, Dario Cantù, David R. Rank, Michael C. Schatz	1182
8	HLA Typing for the Next Generation 2015 ·PLoS ONE ·Neema P. Mayor, James Robinson, Alasdair McWhinnie, Swati Ranade, Kevin Eng, (unknown), Will P. Bultitude, Chen-Shan Chin, Brett Bowman, Patrick Marks, Henny Braund, J. Alejandro Madrigal, Katy Latham, Steven G. E. Marsh	116
9	Assembling large genomes with single-molecule sequencing and locality-sensitive hashing breakdown → 2015 ·Nature Biotechnology ·Konstantin Berlin, Sergey Koren, Chen-Shan Chin, James Drake, Jane M. Landolin, Adam M. Phillippy	629
10	Long-read, whole-genome shotgun sequence data for five model organisms 2014 ·Scientific Data ·(unknown), Paul Peluso, (unknown), P. Jane Yeadon, Charles Yu, William W. Fisher, Chen-Shan Chin, Nicole A. Rapicavoli, David R. Rank, Joaquim Li, David Catcheside, S Celniker, Adam M. Phillippy, Casey Bergman, Jane M. Landolin	113
11	Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data breakdown → 2013 ·Nature Methods ·Chen-Shan Chin, David H. Alexander, Patrick Marks, Aaron A. Klammer, James Drake, Cheryl Heiner, Alicia Clum, Alex Copeland, John Huddleston, Evan E. Eichler, Stephen W. Turner, Jonas Korlach	3105
12	Validation of ITD mutations in FLT3 as a therapeutic target in human acute myeloid leukaemia breakdown → 2012 ·Nature ·Catherine C. Smith, Qi Wang, Chen-Shan Chin, Sara Salerno, Lauren E. Damon, Mark J. Levis, Alexander E. Perl, Kevin Travers, Susana Wang, Jeremy P. Hunt, Patrick P. Zarrinkar, Eric E. Schadt, Andrew Kasarskis, John Kuriyan, Neil P. Shah	542
13	A flexible and efficient template format for circular consensus sequencing and SNP detection 2010 ·Nucleic Acids Research ·Kevin Travers, Chen-Shan Chin, David R. Rank, John Eid, Steve Turner	292
14	A syndrome resembling Bartter's syndrome in sarcoidosis 2008 ·Nephrology Dialysis Transplantation ·(unknown), Shih‐Hua Lin, Ya–Wen Chen, Mei‐Chin Wen, Yen‐Hsu Chen, C.-H. Cheng, Cheng‐Hsu Chen, Chen-Shan Chin, (unknown)	12
15	Gene expression patterns during adaptation of a helminth parasite to different environmental niches 2007 ·Genome biology ·Emmitt R. Jolly, Chen-Shan Chin, Steve Miller, Mahmoud Mohamed Bahgat, K. C. Lim, Joseph L. DeRisi, James H. McKerrow	73
16	Genome-wide regulatory complexity in yeast promoters: Separation of functionally conserved and neutral sequence 2005 ·Genome Research ·Chen-Shan Chin, Jeffrey H. Chuang, Hao Li	39
17	Genome-wide identification of the regulatory targets of a transcription factor using biochemical characterization and computational genomic analysis 2005 ·BMC Bioinformatics ·Emmitt R. Jolly, Chen-Shan Chin, Ira Herskowitz, Hao Li	17
18	Comparing genomic expression patterns across species identifies shared transcriptional profile in aging 2004 ·Nature Genetics ·Steven A. McCarroll, Coleen T. Murphy, Sige Zou, Scott D. Pletcher, Chen-Shan Chin, Yuh Nung Jan, Cynthia Kenyon, Cornelia I. Bargmann, Hao Li	335
19	Global snapshot of a protein interaction network—a percolation based approach 2003 ·Bioinformatics ·Chen-Shan Chin, Manoj P. Samanta	38
20	HFE Genotyping of a Western Australian genetic haemochromatosis population 1997 ·UWA Profiles and Research Repository (University of Western Australia) ·(unknown), Elisa Rossi, Chen-Shan Chin, Richard Sallie, John K. Olynyk, (unknown), (unknown)	1

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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