Patrick Marks

11.7k total citations · 1 hit paper
13 papers, 3.9k citations indexed

About

Patrick Marks is a scholar working on Molecular Biology, Spectroscopy and Biomedical Engineering. According to data from OpenAlex, Patrick Marks has authored 13 papers receiving a total of 3.9k indexed citations (citations by other indexed papers that have themselves been cited), including 7 papers in Molecular Biology, 3 papers in Spectroscopy and 3 papers in Biomedical Engineering. Recurrent topics in Patrick Marks's work include Genomics and Phylogenetic Studies (3 papers), RNA and protein synthesis mechanisms (3 papers) and Molecular Sensors and Ion Detection (2 papers). Patrick Marks is often cited by papers focused on Genomics and Phylogenetic Studies (3 papers), RNA and protein synthesis mechanisms (3 papers) and Molecular Sensors and Ion Detection (2 papers). Patrick Marks collaborates with scholars based in United States, United Kingdom and South Africa. Patrick Marks's co-authors include Jonas Korlach, Chen-Shan Chin, David H. Alexander, Aaron A. Klammer, Alex Copeland, James Drake, Stephen W. Turner, Evan E. Eichler, Alicia Clum and John Huddleston and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Nano Letters.

In The Last Decade

Patrick Marks

13 papers receiving 3.9k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

2013 3.1k citations Chen-Shan Chin, David H. Alexander et al. Nature Methods profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Patrick Marks United States	11	2.4k	902	852	476	402	13	3.9k
Cheryl Heiner United States	18	3.6k 1.5×	1.2k 1.4×	1.3k 1.5×	341 0.7×	722 1.8×	21	5.7k
Stephen W. Turner United States	20	4.5k 1.9×	1.2k 1.3×	1.2k 1.4×	450 0.9×	755 1.9×	22	6.2k
Yu Lin China	22	2.7k 1.1×	1.1k 1.2×	975 1.1×	187 0.4×	635 1.6×	92	4.7k
Mikhail Kolmogorov United States	13	2.8k 1.1×	1.1k 1.2×	1.2k 1.4×	189 0.4×	519 1.3×	22	4.4k
Aaron A. Klammer United States	8	2.5k 1.0×	840 0.9×	808 0.9×	150 0.3×	318 0.8×	8	3.6k
James E. Galagan United States	38	3.4k 1.4×	964 1.1×	413 0.5×	385 0.8×	879 2.2×	76	6.0k
Matthew R. Laird Canada	15	3.3k 1.3×	564 0.6×	1.1k 1.3×	221 0.5×	512 1.3×	17	5.2k
Adrian R. Tivey United Kingdom	7	3.2k 1.3×	1.0k 1.1×	677 0.8×	165 0.3×	628 1.6×	7	5.5k
David Vallenet France	34	2.8k 1.1×	891 1.0×	996 1.2×	280 0.6×	883 2.2×	62	4.8k
Nicole Orange France	40	2.1k 0.9×	838 0.9×	516 0.6×	308 0.6×	652 1.6×	107	4.5k

Countries citing papers authored by Patrick Marks

Since Specialization

Citations

This map shows the geographic impact of Patrick Marks's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Patrick Marks with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Patrick Marks more than expected).

Fields of papers citing papers by Patrick Marks

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Patrick Marks. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Patrick Marks. The network helps show where Patrick Marks may publish in the future.

Co-authorship network of co-authors of Patrick Marks

This figure shows the co-authorship network connecting the top 25 collaborators of Patrick Marks. A scholar is included among the top collaborators of Patrick Marks based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Patrick Marks. Patrick Marks is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

13 of 13 papers shown

1.

Meleshko, Dmitry, Rui Yang, Patrick Marks, Stephen R. Williams, & Iman Hajirasouliha. (2022). Efficient detection and assembly of non-reference DNA sequences with synthetic long reads. Nucleic Acids Research. 50(18). e108–e108. 5 indexed citations

2.

Darby, Charlotte A., Michael J. T. Stubbington, Patrick Marks, Álvaro Martínez Barrio, & Ian T. Fiddes. (2020). scHLAcount: allele-specific HLA expression from single-cell gene expression data. Bioinformatics. 36(12). 3905–3906. 13 indexed citations

3.

Mostovoy, Yulia, Michal Levy‐Sakin, Jessica Lam, et al.. (2016). A hybrid approach for de novo human genome sequence assembly and phasing. Nature Methods. 13(7). 587–590. 147 indexed citations

4.

Mayor, Neema P., James Robinson, Alasdair McWhinnie, et al.. (2015). HLA Typing for the Next Generation. PLoS ONE. 10(5). e0127153–e0127153. 116 indexed citations

5.

Marks, Patrick, et al.. (2015). Highly efficient detection of hydrogen peroxide in solution and in the vapor phase via fluorescence quenching. Chemical Communications. 51(32). 7061–7064. 20 indexed citations

6.

Chin, Chen-Shan, David H. Alexander, Patrick Marks, et al.. (2013). Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nature Methods. 10(6). 563–569. 3105 indexed citations breakdown →

7.

Marks, Patrick, et al.. (2013). Highly efficient quenching of nanoparticles for the detection of electron-deficient nitroaromatics. Journal of Polymer Science Part A Polymer Chemistry. 51(19). 4150–4155. 21 indexed citations

8.

Marks, Patrick, et al.. (2013). Chiral cationic polyamines for chiral microcapsules and siRNA delivery. Bioorganic & Medicinal Chemistry Letters. 23(21). 5919–5922. 3 indexed citations

9.

Mako, Teresa L., et al.. (2012). Fluorescent detection of polycyclic aromatic hydrocarbons in ternary cyclodextrin complexes. Supramolecular chemistry. 24(10). 743–747. 22 indexed citations

10.

Marks, Patrick & Mindy Levine. (2012). Synthesis of a Near-Infrared Emitting Squaraine Dye in an Undergraduate Organic Laboratory. Journal of Chemical Education. 89(9). 1186–1189. 12 indexed citations

11.

Korlach, Jonas, Patrick Marks, Ronald L. Cicero, et al.. (2008). Selective aluminum passivation for targeted immobilization of single DNA polymerase molecules in zero-mode waveguide nanostructures. Proceedings of the National Academy of Sciences. 105(4). 1176–1181. 157 indexed citations

12.

Heng, J.B., Aleksei Aksimentiev, Chuen Ho, et al.. (2005). The Electromechanics of DNA in a Synthetic Nanopore. Biophysical Journal. 90(3). 1098–1106. 156 indexed citations

13.

Heng, J.B., Aleksei Aksimentiev, Chuen Ho, et al.. (2005). Stretching DNA Using the Electric Field in a Synthetic Nanopore. Nano Letters. 5(10). 1883–1888. 140 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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