Andrew J. Bordner

1.3k citations

39 papers · 921 indexed · h-index 20

Co-authors: Ruben Abagyan Hans D. Mittelmann Gary Huber Ryu Sasaki Andrey Gorin Claudio N. Cavasotto Maoqing Dong Laurence J. Miller
Topics: Protein Structure and Dynamics (13 papers)RNA and protein synthesis mechanisms (8 papers)Enzyme Structure and Function (8 papers)
Cited by: Molecular Biology Geometry and Topology Computational Theory and Mathematics
Journals: Proceedings of the National Academy of Sciences Bioinformatics Gastroenterology
Partner nations: United States Japan United Kingdom

In The Last Decade

Andrew J. Bordner

38 papers receiving 902 citations

Peers

Replace Kazuhiko Fukui with:

Kazuhiko Fukui Japan

J. R. Quine United States

Fabrizio Pucci Belgium

O. Schedletzky Germany

Piotr Sułkowski Poland

Jesús Salas Spain

René P. Sperb Switzerland

R. Heinrich Germany

Alexey K. Mazur France

Andrew J. Bordner relative to Kazuhiko Fukui Japan Kazuhiko Fukui's profile →

Citations per field

00.5×1.5×

Kazuhiko Fukui · 1×

×1.2 691/590

MB

×0.8 155/204

MC

×1.2 126/101

CTM

×1.1 101/88

AMPO

×0.6 94/149

IMMUN

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Countries citing papers authored by Andrew J. Bordner

Since Specialization

Citations

This map shows the geographic impact of Andrew J. Bordner's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Andrew J. Bordner with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Andrew J. Bordner more than expected).

Fields of papers citing papers by Andrew J. Bordner

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Andrew J. Bordner. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Andrew J. Bordner. The network helps show where Andrew J. Bordner may publish in the future.

Co-authorship network of co-authors of Andrew J. Bordner

This figure shows the co-authorship network connecting the top 25 collaborators of Andrew J. Bordner. A scholar is included among the top collaborators of Andrew J. Bordner based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Andrew J. Bordner. Andrew J. Bordner is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	A New Formulation of Protein Evolutionary Models that Account for Structural Constraints 2013 ·Molecular Biology and Evolution ·Andrew J. Bordner,Hans D. Mittelmann	20
2	Assessing the Accuracy of SAPT(DFT) Interaction Energies by Comparison with Experimentally Derived Noble Gas Potentials and Molecular Crystal Lattice Energies 2012 ·ChemPhysChem ·Andrew J. Bordner	16
3	Glutamine residues in Q-loops of multidrug resistance protein MRP1 contribute to ATP binding via interaction with metal cofactor 2011 ·Biochimica et Biophysica Acta (BBA) - Biomembranes ·Runying Yang,Yue-xian Hou,(unknown),Kanagaraj Palaniyandi,(unknown),Andrew J. Bordner,(unknown)	12
4	Efficient molecular mechanics simulations of the folding, orientation, and assembly of peptides in lipid bilayers using an implicit atomic solvation model 2011 ·Journal of Computer-Aided Molecular Design ·Andrew J. Bordner,Barry Zorman,Ruben Abagyan	4
5	Force Fields for Homology Modeling 2011 ·Methods in molecular biology ·Andrew J. Bordner	7
6	Refinement of the pharmacophore of an agonist ligand of the secretin receptor using conformationally constrained cyclic hexapeptides 2010 ·Peptides ·Maoqing Dong,Pooja Narang,Delia I. Pinon,Andrew J. Bordner,Laurence J. Miller	4
7	Prediction of the binding affinities of peptides to class II MHC using a regularized thermodynamic model 2010 ·BMC Bioinformatics ·Andrew J. Bordner,Hans D. Mittelmann	29
8	Towards Universal Structure-Based Prediction of Class II MHC Epitopes for Diverse Allotypes 2010 ·PLoS ONE ·Andrew J. Bordner	21
9	Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein design 2010 ·BMC Bioinformatics ·Andrew J. Bordner	5
10	Elucidation of the active conformation of the amino terminus of receptor-bound secretin using intramolecular disulfide bond constraints 2010 ·Bioorganic & Medicinal Chemistry Letters ·Maoqing Dong,Delia I. Pinon,Andrew J. Bordner,Laurence J. Miller	6
11	MultiRTA: A simple yet reliable method for predicting peptide binding affinities for multiple class II MHC allotypes 2010 ·BMC Bioinformatics ·Andrew J. Bordner,Hans D. Mittelmann	36
12	Functional Importance of a Structurally Distinct Homodimeric Complex of the Family B G Protein-Coupled Secretin Receptor 2009 ·Molecular Pharmacology ·Fan Gao,Kaleeckal G. Harikumar,Maoqing Dong,Polo C.‐H. Lam,Patrick M. Sexton,Arthur Christopoulos,Andrew J. Bordner,Ruben Abagyan,Laurence J. Miller	42
13	Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces 2008 ·BMC Bioinformatics ·Andrew J. Bordner,Andrey Gorin	23
14	Protein docking using surface matching and supervised machine learning 2007 ·Proteins Structure Function and Bioinformatics ·Andrew J. Bordner,Andrey Gorin	22
15	Ab initio prediction of peptide‐MHC binding geometry for diverse class I MHC allotypes 2006 ·Proteins Structure Function and Bioinformatics ·Andrew J. Bordner,Ruben Abagyan	66
16	REVCOM: a robust Bayesian method for evolutionary rate estimation 2005 ·Computer applications in the biosciences ·Andrew J. Bordner,Ruben Abagyan	9
17	Statistical analysis and prediction of protein–protein interfaces 2005 ·Proteins Structure Function and Bioinformatics ·Andrew J. Bordner,Ruben Abagyan	126
18	Large‐scale prediction of protein geometry and stability changes for arbitrary single point mutations 2004 ·Proteins Structure Function and Bioinformatics ·Andrew J. Bordner,Ruben Abagyan	88
19	Boundary element solution of the linear Poisson–Boltzmann equation and a multipole method for the rapid calculation of forces on macromolecules in solution 2003 ·Journal of Computational Chemistry ·Andrew J. Bordner,Gary Huber	61
20	Phase space reduction and vortex statistics: An anyon quantization ambiguity 1994 ·Physical review. D. Particles, fields, gravitation, and cosmology/Physical review. D. Particles and fields ·Theodore J. Allen,Andrew J. Bordner,(unknown)	1

About Andrew J. Bordner

Andrew J. Bordner is a scholar working on Geometry and Topology, Algebra and Number Theory and Statistical and Nonlinear Physics, having authored 39 papers that have together received 921 indexed citations. Recurring topics across this work include Protein Structure and Dynamics (13 papers), RNA and protein synthesis mechanisms (8 papers) and Enzyme Structure and Function (8 papers). The work is most often cited by research in Molecular Biology (691 citations), Geometry and Topology (74 citations) and Computational Theory and Mathematics (126 citations). Andrew J. Bordner has collaborated with scholars based in United States, Japan and United Kingdom. Frequent co-authors include Ruben Abagyan, Hans D. Mittelmann, Gary Huber, Ryu Sasaki, Andrey Gorin, Claudio N. Cavasotto, Maoqing Dong, Laurence J. Miller, E. Corrigan and Jerez A. Te. Their work appears in journals such as Proceedings of the National Academy of Sciences, Bioinformatics and Gastroenterology.

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