Anatoly M. Ruvinsky

667 total citations
25 papers, 516 citations indexed

About

Anatoly M. Ruvinsky is a scholar working on Molecular Biology, Materials Chemistry and Computational Theory and Mathematics. According to data from OpenAlex, Anatoly M. Ruvinsky has authored 25 papers receiving a total of 516 indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 11 papers in Materials Chemistry and 8 papers in Computational Theory and Mathematics. Recurrent topics in Anatoly M. Ruvinsky's work include Protein Structure and Dynamics (17 papers), Enzyme Structure and Function (10 papers) and Computational Drug Discovery Methods (8 papers). Anatoly M. Ruvinsky is often cited by papers focused on Protein Structure and Dynamics (17 papers), Enzyme Structure and Function (10 papers) and Computational Drug Discovery Methods (8 papers). Anatoly M. Ruvinsky collaborates with scholars based in United States, Belarus and United Kingdom. Anatoly M. Ruvinsky's co-authors include Ilya A. Vakser, Alexander V. Tuzikov, Tatsiana Kirys, Yu. E. Lozovik, Mario Rivera, S. Roy Kimura, Angelo D. Favia, Woody Sherman, Scott Lovell and Ritesh Kumar and has published in prestigious journals such as Journal of the American Chemical Society, The Journal of Chemical Physics and Bioinformatics.

In The Last Decade

Anatoly M. Ruvinsky

24 papers receiving 503 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Anatoly M. Ruvinsky United States 13 389 178 132 60 59 25 516
Martin Nervall Sweden 11 469 1.2× 161 0.9× 87 0.7× 6 0.1× 78 1.3× 11 687
Sheldon Dennis United States 9 543 1.4× 245 1.4× 161 1.2× 7 0.1× 31 0.5× 12 707
Ramón Garduño‐Juárez Mexico 13 363 0.9× 78 0.4× 73 0.6× 10 0.2× 26 0.4× 48 571
Uddhavesh Sonavane India 14 404 1.0× 144 0.8× 76 0.6× 8 0.1× 12 0.2× 62 636
Marco Scarsi Switzerland 10 475 1.2× 237 1.3× 83 0.6× 21 0.3× 78 1.3× 11 599
Tavner J. Delcamp United States 17 611 1.6× 49 0.3× 185 1.4× 15 0.3× 11 0.2× 29 814
Billy J. Williams‐Noonan Australia 11 272 0.7× 152 0.9× 65 0.5× 8 0.1× 26 0.4× 15 464
Shahila Mehboob United States 13 347 0.9× 91 0.5× 172 1.3× 9 0.1× 16 0.3× 25 651
Marine E. Bozdaganyan Russia 14 361 0.9× 164 0.9× 151 1.1× 4 0.1× 46 0.8× 27 595
Anna S. Kamenik Austria 16 437 1.1× 87 0.5× 105 0.8× 11 0.2× 51 0.9× 36 677

Countries citing papers authored by Anatoly M. Ruvinsky

Since Specialization
Citations

This map shows the geographic impact of Anatoly M. Ruvinsky's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Anatoly M. Ruvinsky with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Anatoly M. Ruvinsky more than expected).

Fields of papers citing papers by Anatoly M. Ruvinsky

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Anatoly M. Ruvinsky. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Anatoly M. Ruvinsky. The network helps show where Anatoly M. Ruvinsky may publish in the future.

Co-authorship network of co-authors of Anatoly M. Ruvinsky

This figure shows the co-authorship network connecting the top 25 collaborators of Anatoly M. Ruvinsky. A scholar is included among the top collaborators of Anatoly M. Ruvinsky based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Anatoly M. Ruvinsky. Anatoly M. Ruvinsky is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Leffler, Abba E., Evelyne M. Houang, Andrew T. Placzek, et al.. (2025). Exploiting Solvent Exposed Salt-Bridge Interactions for the Discovery of Potent Inhibitors of SOS1 Using Free-Energy Perturbation Simulations. ACS Medicinal Chemistry Letters. 16(3). 444–453. 1 indexed citations
3.
McKinney, David C., Gregory S. Basarab, Alexis Cocozaki, et al.. (2015). Structural Insights Lead to a Negamycin Analogue with Improved Antimicrobial Activity against Gram-Negative Pathogens. ACS Medicinal Chemistry Letters. 6(8). 930–935. 10 indexed citations
4.
Kirys, Tatsiana, Anatoly M. Ruvinsky, Deepak Singla, et al.. (2015). Simulated unbound structures for benchmarking of protein docking in the Dockground resource. BMC Bioinformatics. 16(1). 243–243. 10 indexed citations
5.
Ruvinsky, Anatoly M., Ilya A. Vakser, & Mario Rivera. (2014). Local packing modulates diversity of iron pathways and cooperative behavior in eukaryotic and prokaryotic ferritins. The Journal of Chemical Physics. 140(11). 115104–115104. 11 indexed citations
6.
Kirys, Tatsiana, Anatoly M. Ruvinsky, Alexander V. Tuzikov, & Ilya A. Vakser. (2012). Correlation analysis of the side-chains conformational distribution in bound and unbound proteins. BMC Bioinformatics. 13(1). 236–236. 6 indexed citations
7.
Ruvinsky, Anatoly M., Tatsiana Kirys, Alexander V. Tuzikov, & Ilya A. Vakser. (2012). STRUCTURE FLUCTUATIONS AND CONFORMATIONAL CHANGES IN PROTEIN BINDING. Journal of Bioinformatics and Computational Biology. 10(2). 1241002–1241002. 33 indexed citations
8.
Kirys, Tatsiana, Anatoly M. Ruvinsky, Alexander V. Tuzikov, & Ilya A. Vakser. (2012). Rotamer libraries and probabilities of transition between rotamers for the side chains in protein–protein binding. Proteins Structure Function and Bioinformatics. 80(8). 2089–2098. 20 indexed citations
9.
Ruvinsky, Anatoly M., Tatsiana Kirys, Alexander V. Tuzikov, & Ilya A. Vakser. (2011). Side-Chain Conformational Changes upon Protein–Protein Association. Journal of Molecular Biology. 408(2). 356–365. 29 indexed citations
10.
Ruvinsky, Anatoly M. & Ilya A. Vakser. (2010). Sequence composition and environment effects on residue fluctuations in protein structures. The Journal of Chemical Physics. 133(15). 155101–155101. 26 indexed citations
11.
Ruvinsky, Anatoly M. & Ilya A. Vakser. (2009). The ruggedness of protein–protein energy landscape and the cutoff for 1/r n potentials. Bioinformatics. 25(9). 1132–1136. 3 indexed citations
12.
Ruvinsky, Anatoly M. & Ilya A. Vakser. (2008). Chasing Funnels on Protein-Protein Energy Landscapes at Different Resolutions. Biophysical Journal. 95(5). 2150–2159. 12 indexed citations
13.
Ruvinsky, Anatoly M.. (2007). Role of binding entropy in the refinement of protein–ligand docking predictions: Analysis based on the use of 11 scoring functions. Journal of Computational Chemistry. 28(8). 1364–1372. 46 indexed citations
14.
Ruvinsky, Anatoly M. & Ilya A. Vakser. (2007). Interaction cutoff effect on ruggedness of protein–protein energy landscape. Proteins Structure Function and Bioinformatics. 70(4). 1498–1505. 15 indexed citations
15.
Ruvinsky, Anatoly M.. (2007). Calculations of protein-ligand binding entropy of relative and overall molecular motions. Journal of Computer-Aided Molecular Design. 21(7). 361–370. 15 indexed citations
16.
Ruvinsky, Anatoly M., et al.. (2005). New and fast statistical‐thermodynamic method for computation of protein‐ligand binding entropy substantially improves docking accuracy. Journal of Computational Chemistry. 26(11). 1089–1095. 37 indexed citations
17.
Ruvinsky, Anatoly M., et al.. (2005). The key role of atom types, reference states, and interaction cutoff radii in the knowledge‐based method: New variational approach. Proteins Structure Function and Bioinformatics. 58(4). 845–851. 13 indexed citations
18.
Ruvinsky, Anatoly M., et al.. (2005). Novel statistical‐thermodynamic methods to predict protein‐ligand binding positions using probability distribution functions. Proteins Structure Function and Bioinformatics. 62(1). 202–208. 17 indexed citations
19.
Ruvinsky, Anatoly M., et al.. (2004). Novel knowledge-based potentials for ligand docking: variational approach to the old problem. Biophysical Chemistry. 115(2-3). 255–261. 1 indexed citations
20.
Lozovik, Yu. E. & Anatoly M. Ruvinsky. (1997). Magnetoexcitons in coupled quantum wells. Physics Letters A. 227(3-4). 271–284. 44 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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