Standout Papers

Model-based Analysis of ChIP-Seq (MACS) 2006 2026 2012 2019 11.1k
  1. Model-based Analysis of ChIP-Seq (MACS) (2008)
    Yong Zhang, Tao Liu et al. Genome biology
  2. Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome (2009)
    Erez Lieberman-Aiden, Nynke L. van Berkum et al. Science
  3. A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells (2006)
    B Bernstein, Tarjei S. Mikkelsen et al. Cell
  4. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals (2009)
    Mitchell Guttman, Ido Amit et al. Nature
  5. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression (2009)
    Ahmad M. Khalil, Mitchell Guttman et al. Proceedings of the National Academy of Sciences
  6. Mapping and analysis of chromatin state dynamics in nine human cell types (2011)
    Jason Ernst, Pouya Kheradpour et al. Nature
  7. In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state (2007)
    Marius Wernig, Alexander Meissner et al. Nature
  8. Genome-scale DNA methylation maps of pluripotent and differentiated cells (2008)
    Alexander Meissner, Tarjei S. Mikkelsen et al. Nature
  9. Active genes are tri-methylated at K4 of histone H3 (2002)
    Helena Santos-Rosa, Robert Schneider et al. Nature
  10. The Mammalian Epigenome (2007)
    B Bernstein, Alexander Meissner et al. Cell
  11. Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer (2017)
    Sidharth V. Puram, Itay Tirosh et al. Cell
  12. The NIH Roadmap Epigenomics Mapping Consortium (2010)
    B Bernstein, J Stamatoyannopoulos et al. Nature Biotechnology
  13. Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse (2005)
    B Bernstein, Michael Kamal et al. Cell
  14. Dissecting direct reprogramming through integrative genomic analysis (2008)
    Tarjei S. Mikkelsen, Jacob H. Hanna et al. Nature
  15. Charting a dynamic DNA methylation landscape of the human genome (2013)
    Michael J. Ziller, Hongcang Gu et al. Nature
  16. Insulator dysfunction and oncogene activation in IDH mutant gliomas (2015)
    William Flavahan, Yotam Drier et al. Nature
  17. Charting histone modifications and the functional organization of mammalian genomes (2010)
    Alon Goren, B Bernstein et al. Nature Reviews Genetics
  18. Epigenetic plasticity and the hallmarks of cancer (2017)
    William Flavahan, Elizabeth Gaskell et al. Science
  19. Genomewide Analysis of PRC1 and PRC2 Occupancy Identifies Two Classes of Bivalent Domains (2008)
    Manching Ku, Richard P. Koche et al. PLoS Genetics
  20. Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state (2015)
    Assaf Rotem, Oren Ram et al. Nature Biotechnology
  21. Methylation of histone H3 Lys 4 in coding regions of active genes (2002)
    B Bernstein, Rachel Erlich et al. Proceedings of the National Academy of Sciences
  22. Single-Cell RNA-Seq Reveals AML Hierarchies Relevant to Disease Progression and Immunity (2019)
    Peter van Galen, Volker Hovestadt et al. Cell
  23. Epigenetic Reprogramming in Cancer (2013)
    Mario L. Suvà, Nicolò Riggi et al. Science
  24. Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing (2021)
    James K. Nuñez, Chen Jin et al. Cell

Immediate Impact

29 by Nobel laureates 106 from Science/Nature 259 standout
Sub-graph 1 of 13

Citing Papers

Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds
2017 StandoutScience
79 intermediate papers

Works of B Bernstein being referenced

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
2009 StandoutScience
Model-based Analysis of ChIP-Seq (MACS)
2008 Standout
and 20 more

Author Peers

Author Last Decade Papers Cites
B Bernstein 50583 11130 1552 7826 143 58.2k
T Gingeras 32513 8263 882 6790 129 50.0k
Richard A. Young 58343 7076 1233 7510 279 69.2k
Andrew P. Feinberg 44543 6693 1548 15391 233 61.5k
Tony Kouzarides 44255 5378 752 6470 176 53.1k
Jay Shendure 34896 8042 1036 16658 295 50.4k
Michael Wigler 34084 5927 1498 9063 217 44.8k
C. David Allis 76506 5037 1572 9541 343 86.7k
Richard A. Lempicki 36036 10828 1511 7420 125 59.5k
Da Wei Huang 27769 8510 1436 5600 67 44.3k
Aviv Regev 59947 19997 1310 6210 319 77.9k

All Works

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2026