Xibing He

3.1k total citations · 2 hit papers
61 papers, 2.3k citations indexed

About

Xibing He is a scholar working on Molecular Biology, Computational Theory and Mathematics and Materials Chemistry. According to data from OpenAlex, Xibing He has authored 61 papers receiving a total of 2.3k indexed citations (citations by other indexed papers that have themselves been cited), including 37 papers in Molecular Biology, 23 papers in Computational Theory and Mathematics and 18 papers in Materials Chemistry. Recurrent topics in Xibing He's work include Protein Structure and Dynamics (23 papers), Computational Drug Discovery Methods (23 papers) and Spectroscopy and Quantum Chemical Studies (10 papers). Xibing He is often cited by papers focused on Protein Structure and Dynamics (23 papers), Computational Drug Discovery Methods (23 papers) and Spectroscopy and Quantum Chemical Studies (10 papers). Xibing He collaborates with scholars based in United States, China and United Kingdom. Xibing He's co-authors include Alexander D. MacKerell, Junmei Wang, Wenbo Yu, Kenno Vanommeslaeghe, Viet Hoang Man, Tai‐Sung Lee, Wei Yang, Beihong Ji, Xiang‐Qun Xie and Michael L. Klein and has published in prestigious journals such as The Journal of Chemical Physics, SHILAP Revista de lepidopterología and The Journal of Physical Chemistry B.

In The Last Decade

Xibing He

59 papers receiving 2.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Extension of the CHARMM general force field to sulfonyl‐containing compounds and its utility in biomolecular simulations

2012 716 citations Wenbo Yu, Xibing He et al. Journal of Computational Chemistry profile →
A fast and high-quality charge model for the next generation general AMBER force field

2020 406 citations Xibing He, Viet Hoang Man et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Xibing He United States	21	1.3k	458	415	320	293	61	2.3k
Pramod C. Nair Australia	19	1.2k 0.9×	312 0.7×	319 0.8×	192 0.6×	434 1.5×	47	2.6k
Martin Stroet Australia	11	1.1k 0.8×	505 1.1×	265 0.6×	291 0.9×	530 1.8×	18	2.6k
E. Prabhu Raman United States	21	2.0k 1.6×	463 1.0×	697 1.7×	281 0.9×	360 1.2×	29	3.0k
Alexandra Choutko Switzerland	7	1.3k 1.0×	459 1.0×	210 0.5×	268 0.8×	291 1.0×	11	2.3k
Joshua Buckner United States	4	2.1k 1.6×	253 0.6×	300 0.7×	237 0.7×	266 0.9×	5	2.9k
Moritz Winger Australia	11	1.3k 1.0×	431 0.9×	203 0.5×	300 0.9×	356 1.2×	12	2.4k
Nathan Schmid Switzerland	11	1.6k 1.3×	581 1.3×	253 0.6×	447 1.4×	331 1.1×	13	2.8k
Andreas P. Eichenberger Switzerland	11	1.6k 1.3×	627 1.4×	247 0.6×	451 1.4×	327 1.1×	18	2.8k
Brian J. Bennion United States	17	1.5k 1.2×	679 1.5×	178 0.4×	374 1.2×	199 0.7×	30	2.5k
Callum J. Dickson United Kingdom	17	1.6k 1.2×	274 0.6×	382 0.9×	296 0.9×	213 0.7×	24	2.1k

Countries citing papers authored by Xibing He

Since Specialization

Citations

This map shows the geographic impact of Xibing He's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Xibing He with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Xibing He more than expected).

Fields of papers citing papers by Xibing He

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Xibing He. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Xibing He. The network helps show where Xibing He may publish in the future.

Co-authorship network of co-authors of Xibing He

This figure shows the co-authorship network connecting the top 25 collaborators of Xibing He. A scholar is included among the top collaborators of Xibing He based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Xibing He. Xibing He is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

He, Xibing, et al.. (2024). Geometry Optimization Algorithms in Conjunction with the Machine Learning Potential ANI-2x Facilitate the Structure-Based Virtual Screening and Binding Mode Prediction. Biomolecules. 14(6). 648–648.

Man, Viet Hoang, Xibing He, Phuong H. Nguyen, et al.. (2023). Unpolarized laser method for infrared spectrum calculation of amide I C O bonds in proteins using molecular dynamics simulation. Computers in Biology and Medicine. 159. 106902–106902. 4 indexed citations

Ji, Beihong, et al.. (2023). Predicting anti-SARS-CoV-2 activities of chemical compounds using machine learning models. SHILAP Revista de lepidopterología. 1(2). 100029–100029. 2 indexed citations

He, Xibing, et al.. (2021). In silico binding profile characterization of SARS-CoV-2 spike protein and its mutants bound to human ACE2 receptor. Briefings in Bioinformatics. 22(6). 22 indexed citations

He, Xibing, Brandon Walker, Viet Hoang Man, Pengyu Ren, & Junmei Wang. (2021). Recent progress in general force fields of small molecules. Current Opinion in Structural Biology. 72. 187–193. 28 indexed citations

Ji, Beihong, Xibing He, Jingchen Zhai, et al.. (2021). Incorporating structural similarity into a scoring function to enhance the prediction of binding affinities. Journal of Cheminformatics. 13(1). 11–11. 4 indexed citations

Wu, Nan, et al.. (2019). Insight of Captagon Abuse by Chemogenomics Knowledgebase-guided Systems Pharmacology Target Mapping Analyses. Scientific Reports. 9(1). 2268–2268. 20 indexed citations

Ji, Beihong, Shuhan Liu, Ying Xue, et al.. (2019). Prediction of Drug–Drug Interactions Between Opioids and Overdosed Benzodiazepines Using Physiologically Based Pharmacokinetic (PBPK) Modeling and Simulation. Drugs in R&D. 19(3). 297–305. 13 indexed citations

Ge, Haixia, Yuemin Bian, Xibing He, Xiang‐Qun Xie, & Junmei Wang. (2019). Significantly different effects of tetrahydroberberrubine enantiomers on dopamine D1/D2 receptors revealed by experimental study and integrated in silico simulation. Journal of Computer-Aided Molecular Design. 33(4). 447–459. 4 indexed citations

10.

He, Xibing, Viet Hoang Man, Beihong Ji, Xiang‐Qun Xie, & Junmei Wang. (2018). Calculate protein–ligand binding affinities with the extended linear interaction energy method: application on the Cathepsin S set in the D3R Grand Challenge 3. Journal of Computer-Aided Molecular Design. 33(1). 105–117. 29 indexed citations

11.

Aytenfisu, Asaminew H., et al.. (2017). Drude polarizable force field for aliphatic ketones and aldehydes, and their associated acyclic carbohydrates. Journal of Computer-Aided Molecular Design. 31(4). 349–363. 17 indexed citations

12.

Yu, Wenbo, Xibing He, Kenno Vanommeslaeghe, & Alexander D. MacKerell. (2012). Extension of the CHARMM general force field to sulfonyl‐containing compounds and its utility in biomolecular simulations. Journal of Computational Chemistry. 33(31). 2451–2468. 716 indexed citations breakdown →

13.

He, Xibing, Wataru Shinoda, Russell DeVane, Kelly Anderson, & Michael L. Klein. (2010). Paramaterization of a coarse-grained model for linear alkylbenzene sulfonate surfactants and molecular dynamics studies of their self-assembly in aqueous solution. Chemical Physics Letters. 487(1-3). 71–76. 22 indexed citations

14.

He, Xibing. (2009). Chemical Ingredient Studies on the Soft Coral Sinularia robusta macfadyen. Tianran chanwu yanjiu yu kaifa. 1 indexed citations

15.

He, Xibing. (2008). Preparation of Protein Molecularly Imprinted Composite Membrane by Sol-gel Coating Method and Its Permeation Mechanism. Gaodeng xuexiao huaxue xuebao. 4 indexed citations

16.

He, Xibing. (2008). Applied research on SiO_2 deposited by PECVD. 1 indexed citations

17.

He, Xibing. (2003). AFM and XPS Analysises for Organic-on-inorganic Photoelectric Detectors. Journal of Optoelectronics·laser.

18.

He, Xibing, et al.. (2002). A New Glycoside, Cervicoside, from the Soft Coral Sinularia Cervicornis Tix-Dur. Gaodeng xuexiao huaxue xuebao. 23(8). 1536–1538. 2 indexed citations

19.

He, Xibing, et al.. (1996). [Electroanalytical characteristics of ofloxacin in micellar solution].. PubMed. 31(9). 695–9. 1 indexed citations

20.

He, Xibing, S. Swaminathan, B. M. Craven, & R. K. McMullan. (1988). Thermal vibrations and electrostatic properties of parabanic acid at 123 and 298 K. Acta Crystallographica Section B Structural Science. 44(3). 271–281. 9 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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