Pekka Mark

5.2k total citations · 1 hit paper
11 papers, 3.8k citations indexed

About

Pekka Mark is a scholar working on Molecular Biology, Atomic and Molecular Physics, and Optics and Spectroscopy. According to data from OpenAlex, Pekka Mark has authored 11 papers receiving a total of 3.8k indexed citations (citations by other indexed papers that have themselves been cited), including 7 papers in Molecular Biology, 4 papers in Atomic and Molecular Physics, and Optics and 3 papers in Spectroscopy. Recurrent topics in Pekka Mark's work include Protein Structure and Dynamics (4 papers), Spectroscopy and Quantum Chemical Studies (3 papers) and Chemical Synthesis and Analysis (2 papers). Pekka Mark is often cited by papers focused on Protein Structure and Dynamics (4 papers), Spectroscopy and Quantum Chemical Studies (3 papers) and Chemical Synthesis and Analysis (2 papers). Pekka Mark collaborates with scholars based in Sweden, France and Germany. Pekka Mark's co-authors include Lennart Nilsson, Andreas Ruepp, Corinna Montrone, Štefan Kováč, Barbara Brauner, Hans‐Werner Mewes, Philipp Pagel, Goar Frishman, Matthias Oesterheld and Volker Stümpflen and has published in prestigious journals such as Bioinformatics, The Journal of Physical Chemistry B and The Journal of Physical Chemistry A.

In The Last Decade

Pekka Mark

11 papers receiving 3.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Structure and Dynamics of the TIP3P, SPC, and SPC/E Water Models at 298 K

2001 3.1k citations Pekka Mark, Lennart Nilsson The Journal of Physical Chemistry A profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Pekka Mark Sweden	9	1.9k	581	545	480	473	11	3.8k
Ricardo L. Mancera Australia	35	2.5k 1.3×	388 0.7×	476 0.9×	279 0.6×	473 1.0×	150	4.3k
Michel A. Cuendet Switzerland	22	2.1k 1.1×	490 0.8×	639 1.2×	315 0.7×	383 0.8×	54	4.0k
Jérôme Baudry United States	32	2.1k 1.1×	628 1.1×	551 1.0×	225 0.5×	642 1.4×	82	4.0k
Felice C. Lightstone United States	32	2.2k 1.1×	500 0.9×	661 1.2×	367 0.8×	463 1.0×	105	3.9k
Alpeshkumar K. Malde Australia	22	1.7k 0.9×	572 1.0×	600 1.1×	307 0.6×	304 0.6×	65	3.8k
E. Prabhu Raman United States	21	2.0k 1.1×	463 0.8×	697 1.3×	245 0.5×	281 0.6×	29	3.0k
Jihyun Shim United States	11	3.0k 1.6×	738 1.3×	374 0.7×	244 0.5×	537 1.1×	18	4.2k
Yujie Wu China	22	2.0k 1.0×	712 1.2×	788 1.4×	406 0.8×	1.0k 2.2×	46	4.2k
Guoming Xiong United States	5	2.9k 1.5×	888 1.5×	402 0.7×	237 0.5×	486 1.0×	7	4.1k

Countries citing papers authored by Pekka Mark

Since Specialization

Citations

This map shows the geographic impact of Pekka Mark's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Pekka Mark with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Pekka Mark more than expected).

Fields of papers citing papers by Pekka Mark

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Pekka Mark. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Pekka Mark. The network helps show where Pekka Mark may publish in the future.

Co-authorship network of co-authors of Pekka Mark

This figure shows the co-authorship network connecting the top 25 collaborators of Pekka Mark. A scholar is included among the top collaborators of Pekka Mark based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Pekka Mark. Pekka Mark is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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11 of 11 papers shown

Mark, Pekka, Qiong Zhang, Mirjam Czjzek, Harry Brumer, & Hans Ågren. (2011). Molecular dynamics simulations of a branched tetradecasaccharide substrate in the active site of a xyloglucanendo-transglycosylase. Molecular Simulation. 37(12). 1001–1013. 8 indexed citations

Mark, Pekka, Martin Baumann, Jens Eklöf, et al.. (2008). Analysis of nasturtium TmNXG1 complexes by crystallography and molecular dynamics provides detailed insight into substrate recognition by family GH16 xyloglucan endo‐transglycosylases and endo‐hydrolases. Proteins Structure Function and Bioinformatics. 75(4). 820–836. 52 indexed citations

Mark, Pekka & Lennart Nilsson. (2007). A molecular dynamics study of Cyclophilin A free and in complex with the Ala-Pro dipeptide. European Biophysics Journal. 36(3). 213–224. 9 indexed citations

Nakagawa, Setsuko, Pekka Mark, & Hans Ågren. (2007). Recipe of Polarized One-Electron Potential Optimization for Development of Polarizable Force Fields. Journal of Chemical Theory and Computation. 3(6). 1947–1959. 17 indexed citations

Mark, Pekka, et al.. (2007). Molecular dynamics simulations of conserved Hox protein hexapeptides. I. Folding behavior in water solution. Journal of Molecular Structure THEOCHEM. 810(1-3). 113–120. 3 indexed citations

Mark, Pekka, et al.. (2006). Molecular dynamics simulations of conserved Hox protein hexapeptides II. Folded structures in water solution. Journal of Molecular Structure THEOCHEM. 805(1-3). 61–70. 3 indexed citations

Pagel, Philipp, Štefan Kováč, Matthias Oesterheld, et al.. (2004). The MIPS mammalian protein–protein interaction database. Bioinformatics. 21(6). 832–834. 382 indexed citations

Mark, Pekka & Lennart Nilsson. (2002). Structure and dynamics of liquid water with different long‐range interaction truncation and temperature control methods in molecular dynamics simulations. Journal of Computational Chemistry. 23(13). 1211–1219. 133 indexed citations

Mark, Pekka & Lennart Nilsson. (2002). A Molecular Dynamics Study of Tryptophan in Water. The Journal of Physical Chemistry B. 106(36). 9440–9445. 27 indexed citations

10.

Mark, Pekka & Lennart Nilsson. (2001). Molecular Dynamics Simulations of the Ala-Pro Dipeptide in Water: Conformational Dynamics of Trans and Cis Isomers Using Different Water Models. The Journal of Physical Chemistry B. 105(33). 8028–8035. 18 indexed citations

11.

Mark, Pekka & Lennart Nilsson. (2001). Structure and Dynamics of the TIP3P, SPC, and SPC/E Water Models at 298 K. The Journal of Physical Chemistry A. 105(43). 9954–9960. 3121 indexed citations breakdown →

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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