Wataru Shinoda

9.1k total citations · 1 hit paper
162 papers, 7.4k citations indexed

About

Wataru Shinoda is a scholar working on Molecular Biology, Materials Chemistry and Atomic and Molecular Physics, and Optics. According to data from OpenAlex, Wataru Shinoda has authored 162 papers receiving a total of 7.4k indexed citations (citations by other indexed papers that have themselves been cited), including 77 papers in Molecular Biology, 49 papers in Materials Chemistry and 48 papers in Atomic and Molecular Physics, and Optics. Recurrent topics in Wataru Shinoda's work include Lipid Membrane Structure and Behavior (64 papers), Spectroscopy and Quantum Chemical Studies (34 papers) and Protein Structure and Dynamics (29 papers). Wataru Shinoda is often cited by papers focused on Lipid Membrane Structure and Behavior (64 papers), Spectroscopy and Quantum Chemical Studies (34 papers) and Protein Structure and Dynamics (29 papers). Wataru Shinoda collaborates with scholars based in Japan, United States and Switzerland. Wataru Shinoda's co-authors include Michael L. Klein, Masuhiro Mikami, Russell DeVane, Motoyuki Shiga, Susumu Okazaki, Seiji Tsuzuki, Masayoshi Watanabe, Hiroaki Saito, Teruhiko Baba and Steven O. Nielsen and has published in prestigious journals such as Science, Proceedings of the National Academy of Sciences and Journal of the American Chemical Society.

In The Last Decade

Wataru Shinoda

158 papers receiving 7.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Rapid estimation of elastic constants by molecular dynamics simulation under constant stress

2004 1.0k citations Wataru Shinoda et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Wataru Shinoda Japan	44	2.6k	2.1k	1.4k	1.4k	1.4k	162	7.4k
Joachim Dzubiella Germany	44	1.7k 0.6×	2.9k 1.4×	767 0.5×	1.5k 1.0×	2.1k 1.5×	174	8.1k
Aatto Laaksonen Sweden	48	2.2k 0.8×	2.6k 1.2×	788 0.6×	3.0k 2.1×	1.7k 1.2×	296	9.8k
Olivier Diat France	49	1.2k 0.4×	2.7k 1.3×	2.2k 1.5×	676 0.5×	1.5k 1.1×	186	8.1k
Nico F. A. van der Vegt Germany	56	2.6k 1.0×	3.8k 1.8×	972 0.7×	2.1k 1.4×	2.4k 1.7×	189	9.8k
Eugene Mamontov United States	48	1.5k 0.6×	4.7k 2.2×	2.0k 1.4×	1.8k 1.3×	1.4k 1.0×	290	9.1k
Zhen‐Gang Wang United States	51	1.8k 0.7×	3.0k 1.4×	1.6k 1.1×	850 0.6×	1.5k 1.1×	210	8.1k
Akira Nakayama Japan	40	1.8k 0.7×	2.9k 1.4×	1.2k 0.8×	951 0.7×	1.4k 1.0×	181	7.3k
Erdoḡan Gülari United States	49	1.8k 0.7×	3.5k 1.6×	969 0.7×	609 0.4×	1.5k 1.1×	195	7.6k
Yun Liu United States	50	1.8k 0.7×	5.3k 2.5×	1.3k 0.9×	669 0.5×	1.5k 1.1×	272	10.5k
Petr Král United States	53	1.4k 0.5×	5.1k 2.4×	2.1k 1.5×	1.8k 1.2×	2.8k 2.0×	191	10.8k

Countries citing papers authored by Wataru Shinoda

Since Specialization

Citations

This map shows the geographic impact of Wataru Shinoda's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Wataru Shinoda with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Wataru Shinoda more than expected).

Fields of papers citing papers by Wataru Shinoda

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Wataru Shinoda. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Wataru Shinoda. The network helps show where Wataru Shinoda may publish in the future.

Co-authorship network of co-authors of Wataru Shinoda

This figure shows the co-authorship network connecting the top 25 collaborators of Wataru Shinoda. A scholar is included among the top collaborators of Wataru Shinoda based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Wataru Shinoda. Wataru Shinoda is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Shinoda, Wataru, et al.. (2025). Asymmetry and heterogeneity in the plasma membrane. Biophysical Journal. 125(2). 387–395.

Philippi, Frederik, Keisuke Shigenobu, Wataru Shinoda, et al.. (2025). Discrepant lithium transference numbers due to heterogeneous speciation. Physical Chemistry Chemical Physics. 27(28). 15185–15195.

Maeki, Masatoshi, Niko Kimura, Kazuki Shimizu, et al.. (2024). Understanding the effects of ethanol on the liposome bilayer structure using microfluidic-based time-resolved small-angle X-ray scattering and molecular dynamics simulations. Nanoscale Advances. 6(8). 2166–2176. 16 indexed citations

Ishikawa, Toru, Keisuke Shigenobu, Seiji Tsuzuki, et al.. (2024). Linear ether-based highly concentrated electrolytes for Li–sulfur batteries. Faraday Discussions. 253(0). 385–406. 4 indexed citations

Philippi, Frederik, Keisuke Shigenobu, Oriele Palumbo, et al.. (2024). Evolving better solvate electrolytes for lithium secondary batteries. Chemical Science. 15(19). 7342–7358. 7 indexed citations

Miki, Koji, Huiying Mu, Takashi Osawa, et al.. (2024). Light-controllable cell-membrane disturbance for intracellular delivery. Journal of Materials Chemistry B. 12(17). 4138–4147. 1 indexed citations

Umegawa, Yuichi, Hiroshi Tsuchikawa, Wataru Shinoda, & Michio Murata. (2024). NMR and molecular simulation studies on the structure elucidation of the amphotericin B ion channel using ¹³C and ¹⁹F labelling. Organic & Biomolecular Chemistry. 23(6). 1233–1252. 1 indexed citations

Umegawa, Yuichi, Wataru Shinoda, & Michio Murata. (2023). Elucidation of Ion Channel Structure and Mechanism of Action of Amphotericin B, an Antifungal Agent. KAGAKU TO SEIBUTSU. 61(9). 419–431. 1 indexed citations

Yasui, Takao, Masaki Hirano, Keiko Shinjo, et al.. (2023). Mutation detection of urinary cell-free DNA via catch-and-release isolation on nanowires for liquid biopsy. Biosensors and Bioelectronics. 234. 115318–115318. 10 indexed citations

10.

Umegawa, Yuichi, Tomoya Yamamoto, Mayank Dixit, et al.. (2022). Amphotericin B assembles into seven-molecule ion channels: An NMR and molecular dynamics study. Science Advances. 8(24). eabo2658–eabo2658. 40 indexed citations

11.

Yadav, Hari O. S., et al.. (2022). Adsorption characteristics of peptides on ω-functionalized self-assembled monolayers: a molecular dynamics study. Physical Chemistry Chemical Physics. 24(24). 14805–14815. 5 indexed citations

12.

Fujimoto, Kazushi, Wataru Shinoda, Tetsuya Ishikawa, et al.. (2021). All-atom molecular dynamics study of hepatitis B virus containing pregenome RNA in solution. The Journal of Chemical Physics. 155(14). 145101–145101. 6 indexed citations

13.

Zoni, Valeria, Rasha Khaddaj, Ivan Lukmantara, et al.. (2021). Seipin accumulates and traps diacylglycerols and triglycerides in its ring-like structure. Proceedings of the National Academy of Sciences. 118(10). 73 indexed citations

14.

Seo, Sangjae, Michio Murata, & Wataru Shinoda. (2020). Pivotal Role of Interdigitation in Interleaflet Interactions: Implications from Molecular Dynamics Simulations. The Journal of Physical Chemistry Letters. 11(13). 5171–5176. 19 indexed citations

15.

Tsuchikawa, Hiroshi, et al.. (2020). Conformation and Orientation of Branched Acyl Chains Responsible for the Physical Stability of Diphytanoylphosphatidylcholine. Biochemistry. 59(40). 3929–3938. 5 indexed citations

16.

Yadav, Hari O. S., et al.. (2020). Effect of the Packing Density on the Surface Hydrophobicity of ω-Functionalized (−CF₃, −CH₃, −OCH₃, and −OH) Self-Assembled Monolayers: A Molecular Dynamics Study. The Journal of Physical Chemistry C. 124(26). 14237–14244. 12 indexed citations

17.

Tsuchikawa, Hiroshi, Jin Cui, Yuichi Umegawa, et al.. (2019). Average Conformation of Branched Chain Lipid PGP-Me That Accounts for the Thermal Stability and High-Salinity Resistance of Archaeal Membranes. Biochemistry. 58(37). 3869–3879. 8 indexed citations

18.

Hirai, T., et al.. (2019). Hydrogen Permeation in Hydrated Perfluorosulfonic Acid Polymer Membranes: Effect of Polymer Crystallinity and Equivalent Weight. The Journal of Physical Chemistry C. 123(33). 20628–20638. 41 indexed citations

19.

Yamamoto, Tomoya, Yuichi Umegawa, Hiroshi Tsuchikawa, et al.. (2019). The Amphotericin B–Ergosterol Complex Spans a Lipid Bilayer as a Single-Length Assembly. Biochemistry. 58(51). 5188–5196. 24 indexed citations

20.

Yadav, Hari O. S., et al.. (2019). Effects of Packing Density and Chain Length on the Surface Hydrophobicity of Thin Films Composed of Perfluoroalkyl Acrylate Chains: A Molecular Dynamics Study. Langmuir. 35(44). 14316–14323. 16 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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