Sean D. Mooney

14.2k total citations · 2 hit papers
140 papers, 6.0k citations indexed

About

Sean D. Mooney is a scholar working on Molecular Biology, Genetics and Artificial Intelligence. According to data from OpenAlex, Sean D. Mooney has authored 140 papers receiving a total of 6.0k indexed citations (citations by other indexed papers that have themselves been cited), including 80 papers in Molecular Biology, 38 papers in Genetics and 15 papers in Artificial Intelligence. Recurrent topics in Sean D. Mooney's work include Genomics and Rare Diseases (23 papers), RNA and protein synthesis mechanisms (19 papers) and Bioinformatics and Genomic Networks (15 papers). Sean D. Mooney is often cited by papers focused on Genomics and Rare Diseases (23 papers), RNA and protein synthesis mechanisms (19 papers) and Bioinformatics and Genomic Networks (15 papers). Sean D. Mooney collaborates with scholars based in United States, United Kingdom and Italy. Sean D. Mooney's co-authors include Predrag Radivojac, Matthew Mort, D.N. Cooper, Biao Li, Vidhya G. Krishnan, Diane M. Korngiebel, Fuxiao Xin, Simon Melov, Lilia M. Iakoucheva and Vikas Pejaver and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

Sean D. Mooney

134 papers receiving 5.9k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Automated inference of molecular mechanisms of disease from amino acid substitutions

2009 623 citations Biao Li, Vidhya G. Krishnan et al. Bioinformatics profile →
Inferring the molecular and phenotypic impact of amino acid variants with MutPred2

2020 426 citations Vikas Pejaver, Jorge Urresti et al. Nature Communications profile →

Peers

Countries citing papers authored by Sean D. Mooney

Since Specialization

Citations

This map shows the geographic impact of Sean D. Mooney's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Sean D. Mooney with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Sean D. Mooney more than expected).

Fields of papers citing papers by Sean D. Mooney

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Sean D. Mooney. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Sean D. Mooney. The network helps show where Sean D. Mooney may publish in the future.

Co-authorship network of co-authors of Sean D. Mooney

This figure shows the co-authorship network connecting the top 25 collaborators of Sean D. Mooney. A scholar is included among the top collaborators of Sean D. Mooney based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Sean D. Mooney. Sean D. Mooney is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Automated survey collection with LLM-based conversational agents 2025 ·JAMIA Open ·(unknown), (unknown), Sean D. Mooney	0
2	The Automatic Context Measurement Tool (ACMT) to Compile Participant-Specific Built and Social Environment Measures for Health Research: Development and Usability Study 2024 ·JMIR Formative Research ·(unknown), (unknown), (unknown), Brian E. Saelens, Sean D. Mooney, Stephen J. Mooney	0
3	Establishing a Validation Infrastructure for Imaging-Based Artificial Intelligence Algorithms Before Clinical Implementation 2024 ·Journal of the American College of Radiology ·(unknown), Kathryn P. Lowry, Nathan Cross, William Hsu, (unknown), Sean D. Mooney, Christoph I. Lee	7
4	Proteomic Analysis of Huntington’s Disease Medium Spiny Neurons Identifies Alterations in Lipid Droplets 2023 ·Molecular & Cellular Proteomics ·Kizito‐Tshitoko Tshilenge, (unknown), Joanna Bons, Akos A. Gerencser, Nathan Basisty, Sicheng Song, Jacob Rose, (unknown), Swati Naphade, (unknown), (unknown), (unknown), (unknown), Anja Holtz, Claudio Hetz, Sean D. Mooney, Birgit Schilling, Lisa Ellerby	18
5	Forecasting Future Asthma Hospital Encounters of Patients With Asthma in an Academic Health Care System: Predictive Model Development and Secondary Analysis Study 2021 ·Journal of Medical Internet Research ·Yao Tong, (unknown), Adam Wilcox, Sean D. Mooney, Giana H. Davidson, Pradeep Suri, Gang Luo	19
6	Unbiased identification of novel transcription factors in striatal compartmentation and striosome maturation 2021 ·eLife ·(unknown), Sicheng Song, Kizito‐Tshitoko Tshilenge, (unknown), Justyna Mleczko, (unknown), (unknown), Jaroslav Bendl, Pasha Apontes, John F. Fullard, Jordi Creus‐Muncunill, Azadeh Reyahi, Ali Moussavi Nik, Peter Carlsson, Panos Roussos, Sean D. Mooney, Lisa Ellerby, Michelle E. Ehrlich	11
7	Inferring the molecular and phenotypic impact of amino acid variants with MutPred2 breakdown → 2020 ·Nature Communications ·Vikas Pejaver, Jorge Urresti, Jose Lugo-Martinez, Kymberleigh A. Pagel, Guan Ning Lin, Hyun‐Jun Nam, Matthew Mort, D.N. Cooper, Jonathan Sebat, Lilia M. Iakoucheva, Sean D. Mooney, Predrag Radivojac	426
8	Leaf: an open-source, model-agnostic, data-driven web application for cohort discovery and translational biomedical research 2019 ·Journal of the American Medical Informatics Association ·(unknown), (unknown), (unknown), (unknown), (unknown), Elizabeth Zampino, Robert Harrington, (unknown), Kari A. Stephens, Adam Wilcox, Peter Tarczy‐Hornoch, Sean D. Mooney	32
9	Automated retrieval, preprocessing, and visualization of gridded hydrometeorology data products for spatial-temporal exploratory analysis and intercomparison 2019 ·Environmental Modelling & Software ·Jimmy Phuong, Christina Bandaragoda, Erkan İstanbulluoğlu, (unknown), (unknown), (unknown), Sean D. Mooney	8
10	New Drosophila Long-Term Memory Genes Revealed by Assessing Computational Function Prediction Methods 2018 ·G3 Genes Genomes Genetics ·Balint Z Kacsoh, S.K. Barton, Yuxiang Jiang, Naihui Zhou, Sean D. Mooney, Iddo Friedberg, Predrag Radivojac, Casey S. Greene, Giovanni Bosco	13
11	The accuracy of passive phone sensors in predicting daily mood 2018 ·Depression and Anxiety ·Abhishek Pratap, David C. Atkins, Brenna N. Renn, Michael Tanana, Sean D. Mooney, Joaquin A. Anguera, Patricia A. Areán	78
12	Using Mobile Apps to Assess and Treat Depression in Hispanic and Latino Populations: Fully Remote Randomized Clinical Trial 2018 ·Journal of Medical Internet Research ·Abhishek Pratap, Brenna N. Renn, (unknown), Sean D. Mooney, Adam Gazzaley, Patricia A. Areán, Joaquin A. Anguera	79
13	Smartphone-based passive assessment of mobility in depression: Challenges and opportunities 2018 ·Mental health and physical activity ·Brenna N. Renn, Abhishek Pratap, David C. Atkins, Sean D. Mooney, Patricia A. Areán	21
14	Biological and functional relevance of CASP predictions 2017 ·Proteins Structure Function and Bioinformatics ·Tianyun Liu, (unknown), Wen Torng, Aleix Lafita, Christian Bock, Matthew Mort, D.N. Cooper, Spencer Bliven, Guido Capitani, Sean D. Mooney, Russ B. Altman	8
15	Automating Construction of Machine Learning Models With Clinical Big Data: Proposal Rationale and Methods 2017 ·JMIR Research Protocols ·Gang Luo, Bryan L. Stone, Michael D. Johnson, Peter Tarczy‐Hornoch, Adam Wilcox, Sean D. Mooney, Xiaoming Sheng, Peter J. Haug, Flory L. Nkoy	34
16	Automated inference of molecular mechanisms of disease from amino acid substitutions breakdown → 2009 ·Bioinformatics ·Biao Li, Vidhya G. Krishnan, Matthew Mort, Fuxiao Xin, (unknown), D.N. Cooper, Sean D. Mooney, Predrag Radivojac	623
17	An integrated approach to inferring gene–disease associations in humans 2008 ·Proteins Structure Function and Bioinformatics ·Predrag Radivojac, Kang Peng, Wyatt T. Clark, (unknown), Amrita Mohan, Sean M. Boyle, Sean D. Mooney	132
18	Python for Scientific Gateways Development 2007 ·Randy Heiland, (unknown), Ariel Balter, Sean D. Mooney, (unknown), (unknown), Keith Jackson, Joseph A. Insley	2
19	MutDB: update on development of tools for the biochemical analysis of genetic variation 2007 ·Publisher ·Arti Singh, (unknown), (unknown), (unknown), Maricel G. Kann, Predrag Radivojac, Randy Heiland, Sean D. Mooney	2
20	MutDB services: interactive structural analysis of mutation data 2005 ·Publisher ·(unknown), (unknown), Randy Heiland, Sean D. Mooney	2

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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