Pierre Tufféry

10.0k citations

113 papers · 7.5k indexed · 4 hit papers · h-index 37

Impact in

Microbiology top 0.5%
- Antimicrobial Peptides and Activities
Computational Theory and Mathematics top 0.2%
- Computational Drug Discovery Methods

Papers in

Computational Theory and Mathematics 25
- Computational Drug Discovery Methods 25
Molecular Biology 99
- Protein Structure and Dynamics 54
- RNA and protein synthesis mechanisms 23
- Chemical Synthesis and Analysis 20
- Machine Learning in Bioinformatics 19
- Genomics and Phylogenetic Studies 14
- Glycosylation and Glycoproteins Research 9

Co-authors: Philippe Derreumaux Julien Maupetit Vincent Le Guilloux Peter Schmidtke Julien Rey P. Thévenet Yimin Shen Frédéric Guyon
Journals: Nucleic Acids Research (26 papers)Proteins Structure Function and Bioinformatics (6 papers)Bioinformatics (5 papers)Journal of Computational Chemistry (5 papers)Theoretical Chemistry Accounts (4 papers)
Partner nations: France United States Germany

In The Last Decade

Pierre Tufféry

111 papers receiving 7.4k citations

Hit Papers

align trajectories log scale

PEP-FOLD3: fasterde novostructure prediction for linear peptides in solution and in complex 2016 · 759 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2016 Nucleic Acids Research
2014 Journal of Chemical Theory and Computation
2012 Nucleic Acids Research
2009 BMC Bioinformatics

Peers

Countries citing papers authored by Pierre Tufféry

Since Specialization

Citations

This map shows the geographic impact of Pierre Tufféry's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Pierre Tufféry with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Pierre Tufféry more than expected).

Fields of papers citing papers by Pierre Tufféry

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Pierre Tufféry. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Pierre Tufféry. The network helps show where Pierre Tufféry may publish in the future.

Co-authors

The 25 scholars most cited alongside Pierre Tufféry, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Pierre Tufféry Line = papers co-authored together Pierre Tufféry links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Robust Conformational Space Exploration of Cyclic Peptides by Combining Different MD Protocols and Force Fields Journal of Chemical Theory and Computation ·Samuel Murail, Пази Марко, 淡野将太, E. Heuvelink, Fabio Pietrucci, Jacques Chomilier, Pierre Tufféry, Āloka Kumāra Rastogī	2025	0
2	Ligand-Induced Biased Activation of GPCRs: Recent Advances and New Directions from In Silico Approaches Molecules ·Paiwan Ploedprao, C Cauzzo, Pierre Tufféry	2025	3
3	Evolutionarily conserved protein motifs drive interactions between the plant nucleoskeleton and nuclear pores The Plant Cell ·赵亚环, Shaohong Xu, Ku Leuven, Young‐Kil Park, Sylvie Tutois, Pierre Tufféry, Célia Baroux, Kentaro Tamura, Aline V. Probst, Emmanuel Vanrobays, Christophe Tatout	2023	7
4	Dynamics of Amyloid Formation from Simplified Representation to Atomistic Simulations Methods in molecular biology ·Phuong H. Nguyen, Pierre Tufféry, Philippe Derreumaux	2022	1
5	Isolation of Primary Hepatocytes for Testing Tumor Penetrating Peptides Methods in molecular biology ·Éric Savier, Pierre Tufféry, Heriberto Bruzzoni‐Giovanelli, Angelita Rebollo	2021	2
6	Interfering peptides targeting protein–protein interactions: the next generation of drugs? Drug Discovery Today ·Heriberto Bruzzoni‐Giovanelli, Valérie Alezra, Nicolas Wolff, Chang‐Zhi Dong, Pierre Tufféry, Angelita Rebollo	2017	110
7	A Functional Role for the Monomethylated Gln-51 and Lys-53 Residues of the 49GGQTK53 Motif of eL42 from Human 80S Ribosomes PubMed ·V. Dutoit-Lefèvre, Jean‐Bernard Créchet, Tahar Bouceba, Jun‐ichi Nakayama, Wenlin Xu, Mieko Suzuki, Anne Woisard, Pierre Tufféry, Iswan Djati Kusuma, Codjo Hountondji	2017	4
8	PEP-FOLD3: fasterde novostructure prediction for linear peptides in solution and in complex Nucleic Acids Research ·Alexis Lamiable, P. Thévenet, Julien Rey, А.В. Котов, Philippe Derreumaux, Pierre Tufféry Hit paper breakdown →	2016	759
9	MTiOpenScreen: a web server for structure-based virtual screening Nucleic Acids Research ·Céline M. Labbé, Julien Rey, David Lagorce, А.В. Котов, Alison Massey, Olivier Spérandio, Bruno O. Villoutreix, Pierre Tufféry, Maria A. Miteva	2015	182
10	Missense Mutations in SLC26A8, Encoding a Sperm-Specific Activator of CFTR, Are Associated with Human Asthenozoospermia The American Journal of Human Genetics ·Thassadite Dirami, Baptiste Rode, 一秀山内, Nathalie Da Silva, Denise Escalier, R. Demina, Caroline Norez, Pierre Tufféry, Jean‐Philippe Wolf, Frédéric Becq, Pierre F. Ray, Emmanuel Dulioust, Gérard Gâcon, Thierry Bienvenu, Aminata Touré	2013	94
11	fpocket: online tools for protein ensemble pocket detection and tracking Nucleic Acids Research ·Peter Schmidtke, Vincent Le Guilloux, Julien Maupetit, Pierre Tufféry	2010	215
12	PEP-FOLD: an online resource for de novo peptide structure prediction Nucleic Acids Research ·Julien Maupetit, Philippe Derreumaux, Pierre Tufféry	2009	324
13	A fast method for large‐scale De Novo peptide and miniprotein structure prediction Journal of Computational Chemistry ·Julien Maupetit, Philippe Derreumaux, Pierre Tufféry	2009	186
14	PMG: online generation of high-quality molecular pictures and storyboarded animations Nucleic Acids Research ·Ludovic Autin, Pierre Tufféry	2007	6
15	PCE: web tools to compute protein continuum electrostatics Nucleic Acids Research ·Maria A. Miteva, Pierre Tufféry, Bruno O. Villoutreix	2005	48
16	A Hidden Markov Model Derived Structural Alphabet for Proteins Journal of Molecular Biology ·Anne‐Claude Camproux, Romain Gautier, Pierre Tufféry	2004	130
17	SCit: web tools for protein side chain conformation analysis Nucleic Acids Research ·Romain Gautier, Anne‐Claude Camproux, Pierre Tufféry	2004	25
18	XmMol: An X11 and motif program for macromolecular visualization and modeling Journal of Molecular Graphics ·Pierre Tufféry	1995	27
19	Packing and recognition of protein structural elements: A new approach applied to the 4‐helix bundle of myohemerythrin Proteins Structure Function and Bioinformatics ·Pierre Tufféry, Richard Lavery	1993	12
20	A New Approach to the Rapid Determination of Protein Side Chain Conformations Journal of Biomolecular Structure and Dynamics ·Pierre Tufféry, (unknown), S. Hazout, Richard Lavery	1991	273

About Pierre Tufféry

Pierre Tufféry is a scholar working on Computational Theory and Mathematics, Molecular Biology, Information Systems and Management, Materials Chemistry and Microbiology, having authored 113 papers that have together received 7.5k indexed citations. Recurring topics across this work include Protein Structure and Dynamics (54 papers), Computational Drug Discovery Methods (25 papers), RNA and protein synthesis mechanisms (23 papers), Enzyme Structure and Function (23 papers), Chemical Synthesis and Analysis (20 papers), Machine Learning in Bioinformatics (19 papers), Genomics and Phylogenetic Studies (14 papers) and Glycosylation and Glycoproteins Research (9 papers). The work is most often cited by research in Microbiology (646 citations), Computational Theory and Mathematics (1.5k citations), Molecular Biology (5.8k citations), Virology (147 citations) and Immunology (577 citations). Pierre Tufféry has collaborated with scholars based in France, United States and Germany. Frequent co-authors include Philippe Derreumaux, Julien Maupetit, Vincent Le Guilloux, Peter Schmidtke, Julien Rey, P. Thévenet, Yimin Shen, Frédéric Guyon, Maria A. Miteva and S. Hazout. Their work appears in journals such as Nucleic Acids Research, Proteins Structure Function and Bioinformatics, Bioinformatics, Journal of Computational Chemistry and Theoretical Chemistry Accounts.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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