Jörg Hackermüller

14.1k citations

60 papers · 4.0k indexed · 2 hit papers · h-index 26

Impact in

Cancer Research top 1%
- MicroRNA in disease regulation
- Cancer-related molecular mechanisms research
Molecular Biology top 2%
- RNA and protein synthesis mechanisms
- RNA modifications and cancer
- Genomics and Phylogenetic Studies
- RNA Research and Splicing
- Circular RNAs in diseases

Papers in ⓘ

Cancer Research 16
- Cancer-related molecular mechanisms research 12
Molecular Biology 44
- RNA Research and Splicing 15
- RNA and protein synthesis mechanisms 14
- RNA modifications and cancer 10
- Genomics and Phylogenetic Studies 9
- Bioinformatics and Genomic Networks 7
- Circular RNAs in diseases 5

Co-authors: Peter F. Stadler (19 shared papers)Steve Hoffmann (5 shared papers)Jörg Vogel (2 shared papers)Cynthia M. Sharma (2 shared papers)Kristin Reiche (17 shared papers)Sven Findeiß (3 shared papers)Alexandra Sittka (1 shared paper)Richard Reinhardt (1 shared paper)
Journals: Bioinformatics (4 papers)Nature Communications (3 papers)Regulatory Toxicology and Pharmacology (3 papers)Archives of Toxicology (3 papers)Journal of Experimental Zoology Part B Molecular and Developmental Evolution (2 papers)
Partner nations: Germany United States Austria

In The Last Decade

Jörg Hackermüller

57 papers receiving 4.0k citations

Hit Papers

align trajectories log scale

The primary transcriptome of the major human pathogen Helicobacter pylori 2010 · 912 citations

Peers

Countries citing papers authored by Jörg Hackermüller

Since Specialization

Citations

This map shows the geographic impact of Jörg Hackermüller's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jörg Hackermüller with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jörg Hackermüller more than expected).

Fields of papers citing papers by Jörg Hackermüller

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jörg Hackermüller. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jörg Hackermüller. The network helps show where Jörg Hackermüller may publish in the future.

Co-authors

The 25 scholars most cited alongside Jörg Hackermüller, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Jörg Hackermüller Line = papers co-authored together Jörg Hackermüller links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 60 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	The primary transcriptome of the major human pathogen Helicobacter pylori Nature ·Cynthia M. Sharma, Steve Hoffmann, Fabien Darfeuille, Jérémy Reignier, Sven Findeiß, Alexandra Sittka, Sandrine Chabas, Kristin Reiche, Jörg Hackermüller, Richard Reinhardt, Peter F. Stadler, Jörg Vogel Hit paper breakdown →	2010	912
2	Interleukin-6–dependent survival of multiple myeloma cells involves the Stat3-mediated induction of microRNA-21 through a highly conserved enhancer Blood ·Dennis Löffler, Katja Brocke-Heidrich, Gabriele Pfeifer, Claudia Stocsits, Jörg Hackermüller, A. Kretzschmar, Renate Burger, Martin Gramatzki, Conny Blumert, Kay Bauer, Helena Cvijic, A. Kerstin Ullmann, Peter F. Stadler, Friedemann Horn Hit paper breakdown →	2007	524
3	Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures PLoS Computational Biology ·Steve Hoffmann, Christian Otto, Stefan Kurtz, Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller	2009	389
4	Thermodynamics of RNA–RNA binding Bioinformatics ·Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan Wolf, Peter F. Stadler, Ivo L. Hofacker	2006	271
5	A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection Genome biology ·Steve Hoffmann, Christian Otto, Gero Doose, Andrea Tanzer, David Langenberger, Sabina Christ, Manfred Kunz, Lesca M. Holdt, Daniel Teupser, Jörg Hackermüller, Peter F. Stadler	2014	209
6	MiR-130a, miR-203 and miR-205 jointly repress key oncogenic pathways and are downregulated in prostate carcinoma Oncogene ·Kerstin Boll, Kristin Reiche, Katharina Kasack, Nora Mörbt, A. Kretzschmar, Janina M. Tomm, Gerald W. Verhaegh, Jack A. Schalken, Martin von Bergen�, Friedemann Horn, Jörg Hackermüller	2012	180
7	Prospects and challenges of multi-omics data integration in toxicology Archives of Toxicology ·Sebastian Canzler, Jana Schor, Wibke Busch, Kristin Schubert, Ulrike Rolle‐Kampczyk, Hervé Seitz, Hennicke Kamp, Martin von Bergen�, Roland Buesen, Jörg Hackermüller	2020	177
8	Evolution of Vault RNAs Molecular Biology and Evolution ·Peter F. Stadler, Julian J.‐L. Chen, Jörg Hackermüller, Steve Hoffmann, Friedemann Horn, Philipp Khaitovich, A. K. Kretzschmar, Axel Mosig, Sonja J. Prohaska, Xiaodong Qi, Katharina Schütt, Katharina Ullmann	2009	124
9	mRNA Openers and Closers: Modulating AU‐Rich Element‐Controlled mRNA Stability by a Molecular Switch in mRNA Secondary Structure ChemBioChem ·Nicole Meisner‐Kober, Jörg Hackermüller, Volker Uhl, András Aszódi, Markus Jaritz, Manfred Auer	2004	109
10	multiGSEA: a GSEA-based pathway enrichment analysis for multi-omics data BMC Bioinformatics ·Sebastian Canzler, Jörg Hackermüller	2020	103
11	The challenge of the application of 'omics technologies in chemicals risk assessment: Background and outlook Regulatory Toxicology and Pharmacology ·Ursula G. Sauer, Lize Deferme, Laura Gribaldo, Jörg Hackermüller, Tewes Tralau, B. van Ravenzwaay, Carole L. Yauk, Alan Poole, Weida Tong, Timothy W. Gant	2017	89
12	Detection of small RNAs in Pseudomonas aeruginosa by RNomics and structure-based bioinformatic tools Microbiology ·Elisabeth Sonnleitner, Theresa Sorger‐Domenigg, M Madej, Sven Findeiß, Jörg Hackermüller, Alexander Hüttenhofer, Peter F. Stadler, Udo Bläsi, Isabella Moll	2008	78
13	CD31, EDNRB and TSPAN7 are promising prognostic markers in clear‐cell renal cell carcinoma revealed by genome‐wide expression analyses of primary tumors and metastases International Journal of Cancer ·Daniela Wuttig, Stefan Zastrow, S. Füssel, Marieta Toma, Matthias Meinhardt, Kristin Kalman, Kerstin Junker, Jimsgene Sanjmyatav, Kerstin Boll, Jörg Hackermüller, Axel Rolle, Marc‐Oliver Grimm, Manfred P. Wirth	2011	74
14	Dissecting the genetics of the human transcriptome identifies novel trait-relatedtrans-eQTLs and corroborates the regulatory relevance of non-protein coding loci Human Molecular Genetics ·Holger Kirsten, Hoor Al-Hasani, Lesca M. Holdt, Arnd Gross, Frank Beutner, Knut Krohn, Katrin Horn, Peter Ahnert, Ralph Burkhardt, Kristin Reiche, Jörg Hackermüller, Markus Löffler, Daniel Teupser, Joachim Thiery, Markus Scholz	2015	69
15	RNAs everywhere: genome‐wide annotation of structured RNAs Journal of Experimental Zoology Part B Molecular and Developmental Evolution ·Rolf Backofen, Stephan Wolf, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L. Hofacker, Kristin Missal, Axel Mosig, Sonja J. Prohaska, Dominic Rose, Peter F. Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will	2006	64
16	Roquin targets mRNAs in a 3′-UTR-specific manner by different modes of regulation Nature Communications ·Katharina Essig, Nina Kronbeck, Joao C. Guimaraes, Claudia Lohs, Andreas Schlundt, Anne Hoffmann, Gesine Behrens, Sven Brenner, Joanna Kowalska, Cristina López-Rodrı́guez, Jacek Jemielity, Helmut Holtmann, Kristin Reiche, Jörg Hackermüller, Michael Sattler, Mihaela Zavolan, Vigo Heissmeyer	2018	41
17	Computational RNomics of Drosophilids BMC Genomics ·Dominic Rose, Jörg Hackermüller, Stefan Washietl, Kristin Reiche, Jana Hertel, Sven Findeiß, Peter F. Stadler, Sonja J. Prohaska	2007	39
18	The effect of RNA secondary structures on RNA-ligand binding and the modifier RNA mechanism: a quantitative model Gene ·Jörg Hackermüller, Nicole Meisner‐Kober, Manfred Auer, Markus Jaritz, Peter F. Stadler	2005	39
19	Long Non-Coding RNAs Differentially Expressed between Normal versus Primary Breast Tumor Tissues Disclose Converse Changes to Breast Cancer-Related Protein-Coding Genes PLoS ONE ·Kristin Reiche, Katharina Kasack, S Schreiber, Torben Lüders, Eldri U. Due, Bjørn Naume, Margit Riis, Vessela N. Kristensen, Friedemann Horn, Anne‐Lise Børresen‐Dale, Jörg Hackermüller, Lars O. Baumbusch	2014	35
20	Cell cycle, oncogenic and tumor suppressor pathways regulate numerous long and macro non-protein-coding RNAs Genome biology ·Jörg Hackermüller, Kristin Reiche, Christian Otto, Nadine Hösler, Conny Blumert, Katja Brocke-Heidrich, Levin Böhlig, Anne Nitsche, Katharina Kasack, Peter Ahnert, Wolfgang Krupp, Kurt Engeland, Peter F. Stadler, Friedemann Horn	2014	35

About Jörg Hackermüller

Jörg Hackermüller is a scholar working on Cancer Research, Molecular Biology, Pollution, Health, Toxicology and Mutagenesis and Small Animals, having authored 60 papers that have together received 4.0k indexed citations. Recurring topics across this work include RNA Research and Splicing (15 papers), RNA and protein synthesis mechanisms (14 papers), Cancer-related molecular mechanisms research (12 papers), RNA modifications and cancer (10 papers), Genomics and Phylogenetic Studies (9 papers), Bioinformatics and Genomic Networks (7 papers), Computational Drug Discovery Methods (6 papers) and Circular RNAs in diseases (5 papers). The work is most often cited by research in Cancer Research (1.2k citations), Molecular Biology (3.0k citations), Endocrinology (117 citations), Genetics (572 citations) and Ecology (478 citations). Jörg Hackermüller has collaborated with scholars based in Germany, United States and Austria. Frequent co-authors include Peter F. Stadler, Steve Hoffmann, Jörg Vogel, Cynthia M. Sharma, Kristin Reiche, Sven Findeiß, Alexandra Sittka, Richard Reinhardt, Sandrine Chabas and Fabien Darfeuille. Their work appears in journals such as Bioinformatics, Nature Communications, Regulatory Toxicology and Pharmacology, Archives of Toxicology and Journal of Experimental Zoology Part B Molecular and Developmental Evolution.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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