Muhammad Ali

7.3k citations

49 papers · 863 indexed · h-index 15

Impact in

Biological Psychiatry
Complementary and alternative medicine top 5%
- Medicinal Plants and Neuroprotection

Papers in

Biological Psychiatry 2
Ophthalmology 7
- Intraocular Surgery and Lenses 3
- Glaucoma and retinal disorders 3

Co-authors: Azhar Rasul Aroona Razzaq Nimra Aziz Muhammad Saif Ur Rahman Ghulam Hussain Haseeb AnwarWei WeiXiaomeng Li
Journals: Scientific Reports (3 papers)Investigative Ophthalmology & Visual Science (3 papers)PLoS ONE (3 papers)Acta Neuropathologica Communications (2 papers)Human Molecular Genetics (2 papers)
Partner nations: United States Pakistan Luxembourg

In The Last Decade

Muhammad Ali

46 papers receiving 850 citations

Peers

Countries citing papers authored by Muhammad Ali

Since Specialization

Citations

This map shows the geographic impact of Muhammad Ali's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Muhammad Ali with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Muhammad Ali more than expected).

Fields of papers citing papers by Muhammad Ali

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Muhammad Ali. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Muhammad Ali. The network helps show where Muhammad Ali may publish in the future.

Co-authors

The 25 scholars most cited alongside Muhammad Ali, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Muhammad Ali Line = papers co-authored together Muhammad Ali links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Patient stratification by genetic risk in Alzheimer’s disease is only effective in the presence of phenotypic heterogeneity PLoS ONE ·Jack Euesden, Muhammad Ali, Chloe Robins, Praveen Surendran, Padhraig Gormley, (unknown), David Pulford, A. M. Chotchaev	2025	0
2	Temporal transcriptomic changes in the THY-Tau22 mouse model of tauopathy display cell type- and sex-specific differences Acta Neuropathologica Communications ·Muhammad Ali, Pierre Garcia, Terrence T. Kato, G. Garvanska, Joel W. Duensing, Tony Heurtaux, Kamil Grzyb, Rashi Halder, Alexander Skupin, Luc Buée, David Blum, Manuel Buttini, Enrico Glaab	2025	1
3	Single cell transcriptome analysis of the THY-Tau22 mouse model of Alzheimer’s disease reveals sex-dependent dysregulations Cell Death Discovery ·Muhammad Ali, Pierre Garcia, Terrence T. Kato, G. Garvanska, Joel W. Duensing, Tony Heurtaux, Kamil Grzyb, Rashi Halder, Djalil Coowar, Daniele Estrela Ferreira, Luc Buée, David Blum, Manuel Buttini, Enrico Glaab	2024	7
4	Cell-free RNA signatures predict Alzheimer’s disease iScience ·Tiantian Sun, Aleksandra Beric, Muhammad Ali, Juan-Antonio Morente, Lisa Sommers, María Victoria Fernández, Joanne Norton, Jen Gentsch, Kristy Bergmann, John Budde, Joel S. Perlmutter, John C. Morris, Carlos Cruchaga, Juan A. Botía, Laura Ibáñez	2023	3
5	Fuchs Dystrophy and Cataract: Diagnosis, Evaluation and Treatment Ophthalmology and Therapy ·Muhammad Ali, Ngọc Lê, Divya Srikumaran	2023	14
6	Harmonization of CSF and imaging biomarkers in Alzheimer's disease: Need and practical applications for genetics studies and preclinical classification Neurobiology of Disease ·Jigyasha Timsina, Muhammad Ali, Daoke Liu, Lihua Wang, Daniel Western, Yun Ju Sung, Carlos Cruchaga	2023	7
7	Multi‐cohort cerebrospinal fluid proteomics identifies robust molecular signatures for asymptomatic and symptomatic Alzheimer’s disease Alzheimer s & Dementia ·Muhammad Ali, Jigyasha Timsina, Lihua Wang, Daoke Liu, Daniel Western, Yun Ju Sung, Carlos Cruchaga	2023	1
8	Single-Cell Transcriptional Profiling and Gene Regulatory Network Modeling in Tg2576 Mice Reveal Gender-Dependent Molecular Features Preceding Alzheimer-Like Pathologies Molecular Neurobiology ·Muhammad Ali, Barbara Padberg Sgier, Tony Heurtaux, Pierre Garcia, V. Spagnuolo, Kamil Grzyb, Rashi Halder, Alexander Skupin, Manuel Buttini, Enrico Glaab	2022	12
9	Computational Methods to Identify Cell-Fate Determinants, Identity Transcription Factors, and Niche-Induced Signaling Pathways for Stem Cell Research Methods in molecular biology ·Muhammad Ali, Akash P. Mustari, Antonio del Sol	2022	2
10	A computer-guided design tool to increase the efficiency of cellular conversions Nature Communications ·Sascha Jung, Evan Appleton, Muhammad Ali, George M. Church, Antonio del Sol	2021	23
11	Characterization of DNA Methylomic Signatures in Induced Pluripotent Stem Cells During Neuronal Differentiation Frontiers in Cell and Developmental Biology ·Milan S Manoj, Ehsan Pishva, Muhammad Ali, Talitha L. Kerrigan, Aaron R. Jeffries, Joe Burrage, Enrico Glaab, Elizabeth Lipscomb, Agus Edi Sukarton, Nicholas D. Allen, Katie Lunnon	2021	7
12	Metabolome profiling of the developing murine lens Experimental Eye Research ·Shahid Y. Khan, Muhammad Ali, Sheikh Riazuddin	2020	2
13	Synapse alterations precede neuronal damage and storage pathology in a human cerebral organoid model of CLN3-juvenile neuronal ceroid lipofuscinosis Acta Neuropathologica Communications ·Gemma Gomez‐Giro, Jonathan Arias, Javier Jarazo, Dagmar Zeuschner, Muhammad Ali, MarcFiszman, Silvia Bolognin, Rashi Halder, Christian Jäger, Andika Yuda Pratama, Peter M. van Hasselt, Holm Zaehres, Antonio del Sol, Herman van der Putten, Hans R. Schöler, Jens C. Schwamborn	2019	39
14	Identification of novel transcripts and peptides in developing murine lens Scientific Reports ·Shahid Y. Khan, Muhammad Ali, Firoz Kabir, Ruiqiang Chen, Chan Hyun Na, Wendy Lee, Nader Pourmand, Sean F. Hackett, Saima Riazuddin	2018	4
15	Comparative transcriptome analysis of hESC- and iPSC-derived corneal endothelial cells Experimental Eye Research ·Muhammad Ali, Shahid Y. Khan, Firoz Kabir, John D. Gottsch, Sheikh Riazuddin	2018	10
16	Genetic characterization and disease mechanism of retinitis pigmentosa; current scenario 3 Biotech ·Muhammad Ali, Muhammad Saif Ur Rahman, Jiang Cao, Ping Yuan	2017	59
17	Mutation in LIM2 Is Responsible for Autosomal Recessive Congenital Cataracts PLoS ONE ·Nathan H. Leroy, Shahid Y. Khan, Muhammad Ali, Haiba Kaul, Firoz Kabir, Sochea Pok, Paul Baumeister, K. Imai, Arif O. Khan, Charles Croze, Muhammad Asif Naeem, Margault Sacré, Shaheen N. Khan, Tayyab Husnaın, Sheikh Riazuddin, Javed Akram, Allen O. Eghrari	2016	20
18	Deletion at the GCNT2 Locus Causes Autosomal Recessive Congenital Cataracts PLoS ONE ·Nathan H. Leroy, Shahid Y. Khan, Muhammad Ali, Muhammad Daud, Firoz Kabir, Sochea Pok, Paul Baumeister, Hira Iqbal, Arif O. Khan, Charles Croze, Muhammad Asif Naeem, Idrees Ahmad Nasir, Shaheen N. Khan, Tayyab Husnaın, Sheikh Riazuddin, Javed Akram, Allen O. Eghrari	2016	8
19	Serum haematological and biochemical indices of oxidative stress and their relationship with DNA damage and homocysteine in Pakistani type II diabetic patients. PubMed ·Shazia Anwer Bukhari, Sadia Javed, Muhammad Ali, Huerter Christopher, Amanda W Pearson	2015	4
20	Studies on the expression and processing of human proinsulin derivatives encoded by different DNA constructs Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics ·Farheen Aslam, J. Herkendell, Hina Zain, Muhammad Shahid Nadeem, Muhammad Ali, Naeem Rashid, Muhammad Akhtar	2013	8

About Muhammad Ali

Muhammad Ali is a scholar working on Biological Psychiatry, Ophthalmology, Neurology, Molecular Biology and Endocrinology, having authored 49 papers that have together received 863 indexed citations. Recurring topics across this work include Connexins and lens biology (8 papers), Corneal surgery and disorders (6 papers), Corneal Surgery and Treatments (6 papers), Alzheimer's disease research and treatments (6 papers), Bioinformatics and Genomic Networks (5 papers), Single-cell and spatial transcriptomics (3 papers), Intraocular Surgery and Lenses (3 papers) and Glaucoma and retinal disorders (3 papers). The work is most often cited by research in Biological Psychiatry (27 citations), Complementary and alternative medicine (87 citations), Ophthalmology (92 citations), Pharmacology (59 citations) and Molecular Biology (465 citations). Muhammad Ali has collaborated with scholars based in United States, Pakistan and Luxembourg. Frequent co-authors include Azhar Rasul, Aroona Razzaq, Nimra Aziz, Muhammad Saif Ur Rahman, Ghulam Hussain, Haseeb Anwar, Wei Wei, Xiaomeng Li, Jiang Li and Shahid Y. Khan. Their work appears in journals such as Scientific Reports, Investigative Ophthalmology & Visual Science, PLoS ONE, Acta Neuropathologica Communications and Human Molecular Genetics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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