Mostafa Ronaghi

13.7k total citations · 4 hit papers
101 papers, 8.4k citations indexed

About

Mostafa Ronaghi is a scholar working on Molecular Biology, Biomedical Engineering and Ecology. According to data from OpenAlex, Mostafa Ronaghi has authored 101 papers receiving a total of 8.4k indexed citations (citations by other indexed papers that have themselves been cited), including 73 papers in Molecular Biology, 22 papers in Biomedical Engineering and 9 papers in Ecology. Recurrent topics in Mostafa Ronaghi's work include bioluminescence and chemiluminescence research (19 papers), RNA and protein synthesis mechanisms (14 papers) and Advanced biosensing and bioanalysis techniques (13 papers). Mostafa Ronaghi is often cited by papers focused on bioluminescence and chemiluminescence research (19 papers), RNA and protein synthesis mechanisms (14 papers) and Advanced biosensing and bioanalysis techniques (13 papers). Mostafa Ronaghi collaborates with scholars based in United States, Sweden and Iran. Mostafa Ronaghi's co-authors include Pål Nyrén, Mathias Uhlén, Baback Gharizadeh, Samer Karamohamed, Bertil Pettersson, Elahe Elahi, Hossein Fakhrai-Rad, Robert W. Shafer, Joakim Lundeberg and Yumi Mitsuya and has published in prestigious journals such as Science, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

Mostafa Ronaghi

101 papers receiving 8.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

A Sequencing Method Based on Real-Time Pyrophosphate

1998 1.1k citations Mostafa Ronaghi et al. profile →
Real-Time DNA Sequencing Using Detection of Pyrophosphate Release

1996 724 citations Mostafa Ronaghi et al. profile →
High-definition spatial transcriptomics for in situ tissue profiling

2019 705 citations Sanja Vicković, Gökçen Eraslan et al. Nature Methods profile →
Pyrosequencing Sheds Light on DNA Sequencing

2001 551 citations Mostafa Ronaghi Genome Research profile →

Peers

Countries citing papers authored by Mostafa Ronaghi

Since Specialization

Citations

This map shows the geographic impact of Mostafa Ronaghi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Mostafa Ronaghi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Mostafa Ronaghi more than expected).

Fields of papers citing papers by Mostafa Ronaghi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Mostafa Ronaghi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Mostafa Ronaghi. The network helps show where Mostafa Ronaghi may publish in the future.

Co-authorship network of co-authors of Mostafa Ronaghi

This figure shows the co-authorship network connecting the top 25 collaborators of Mostafa Ronaghi. A scholar is included among the top collaborators of Mostafa Ronaghi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Mostafa Ronaghi. Mostafa Ronaghi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	High-definition spatial transcriptomics for in situ tissue profiling breakdown → 2019 ·Nature Methods ·Sanja Vicković, Gökçen Eraslan, Fredrik Salmén, Johanna Klughammer, Linnea Stenbeck, Denis Schapiro, Tarmo Äijö, Richard Bonneau, Ludvig Bergenstråhle, José Fernández Navarro, Joshua Gould, Gabriel K. Griffin, Åke Borg, Mostafa Ronaghi, Jonas Frisén, Joakim Lundeberg, Aviv Regev, Patrik L. Ståhl	705
2	Haplotype phasing of whole human genomes using bead-based barcode partitioning in a single tube 2017 ·Nature Biotechnology ·Fan Zhang, Lena Christiansen, (unknown), Dmitry Pokholok, (unknown), (unknown), (unknown), (unknown), Emily C. Welch, Erich Jaeger, (unknown), Steven Norberg, Aaron L. Halpern, (unknown), Mostafa Ronaghi, Jay Shendure, Niall Gormley, Kevin L. Gunderson, Frank J. Steemers	28
3	Sequences of 95 humanMHChaplotypes reveal extreme coding variation in genes other than highly polymorphicHLA class IandII 2017 ·Genome Research ·Paul J. Norman, Steven Norberg, Lisbeth A. Guethlein, Neda Nemat‐Gorgani, Thomas Royce, Emily E. Wroblewski, (unknown), Tobias Mann, Claudia Alicata, Jill A. Hollenbach, Weihua Chang, (unknown), Kevin L. Gunderson, Laurent Abi-Rached, Mostafa Ronaghi, Peter Parham	69
4	Contiguity-Preserving Transposition Sequencing (CPT-Seq) for Genome-Wide Haplotyping, Assembly, and Single-Cell ATAC-Seq 2017 ·Methods in molecular biology ·Lena Christiansen, Sasan Amini, Fan Zhang, Mostafa Ronaghi, Kevin L. Gunderson, Frank J. Steemers	5
5	Effective Factors on Education Policies and Academic Technology 2014 ·Rāhburdhā-yi āmūzish dar ̒ulūm-i pizishkī ·Mostafa Ronaghi, (unknown)	1
6	In vitro, long-range sequence information for de novo genome assembly via transposase contiguity 2014 ·Genome Research ·Andrew C. Adey, Jacob O. Kitzman, Joshua N. Burton, Riza M. Daza, Akash Kumar, Lena Christiansen, Mostafa Ronaghi, Sasan Amini, Kevin L. Gunderson, Frank J. Steemers, Jay Shendure	112
7	Genetic analysis and SOD1 mutation screening in Iranian amyotrophic lateral sclerosis patients 2012 ·Neurobiology of Aging ·Afagh Alavi, Shahriar Nafissi, Mohammad Rohani, Babak Zamani, Behnaz Sedighi, (unknown), Jian‐Bing Fan, Mostafa Ronaghi, Elahe Elahi	37
8	pfSNP: An integrated potentially functional SNP resource that facilitates hypotheses generation through knowledge syntheses 2010 ·Human Mutation ·Jingbo Wang, Mostafa Ronaghi, Samuel S. Chong, Caroline Lee	20
9	Deregulated Direct Targets of the Hepatitis B Virus (HBV) Protein, HBx, Identified through Chromatin Immunoprecipitation and Expression Microarray Profiling 2009 ·Journal of Biological Chemistry ·Wing‐Kin Sung, Yiwei Lu, Charlie W. H. Lee, Dongwei Zhang, Mostafa Ronaghi, Caroline Lee	38
10	Minority Human Immunodeficiency Virus Type 1 Variants in Antiretroviral-Naive Persons with Reverse Transcriptase Codon 215 Revertant Mutations 2008 ·Journal of Virology ·Yumi Mitsuya, Vici Varghese, Chunlin Wang, Tommy F. Liu, Susan Holmes, (unknown), Baback Gharizadeh, Mostafa Ronaghi, Daniel B. Klein, W. Jeffrey Fessel, Robert W. Shafer	63
11	Genome-wide Linkage Analysis of a Parkinsonian-Pyramidal Syndrome Pedigree by 500 K SNP Arrays 2008 ·The American Journal of Human Genetics ·Seyedmehdi Shojaee, Farzad Sina, Setareh Sadat Banihosseini, Mohammad Kazemi, Reza Kalhor, Gholam Ali Shahidi, Hossein Fakhrai-Rad, Mostafa Ronaghi, Elahe Elahi	171
12	A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing 2007 ·Nucleic Acids Research ·Poornima Parameswaran, Roxana Jalili, Li Tao, Shadi Shokralla, Baback Gharizadeh, Mostafa Ronaghi, Andrew Fire	271
13	Prediction of protein orientation upon immobilization on biological and nonbiological surfaces 2006 ·Proceedings of the National Academy of Sciences ·AmirAli Talasaz, Mohsen Nemat‐Gorgani, Yang Liu, Patrik L. Ståhl, R.W. Dutton, Mostafa Ronaghi, Ronald W. Davis	55
14	A New DNA Implementation of Finite State Machines 2006 ·Abbas Nowzari-Dalini, Elahe Elahi, (unknown), Mostafa Ronaghi	2
15	A Haplotype Framework for Cystic Fibrosis Mutations in Iran 2006 ·Journal of Molecular Diagnostics ·Elahe Elahi, Ahmad Khodadad, Ilya Kupershmidt, (unknown), (unknown), (unknown), Robert G. Eason, (unknown), (unknown), (unknown), Mohammad Hossein Sanati, Ronald W. Davis, Mostafa Ronaghi, Yvonne R. Thorstenson	30
16	Pyrosequencing for SNP Genotyping 2003 ·Humana Press eBooks ·Mostafa Ronaghi	53
17	Pyrosequencing?: An accurate detection platform for single nucleotide polymorphisms 2002 ·Human Mutation ·Hossein Fakhrai-Rad, Nader Pourmand, Mostafa Ronaghi	194
18	Discovery of single nucleotide polymorphisms and mutations by Pyrosequencing 2002 ·Comparative and Functional Genomics ·Mostafa Ronaghi, Elahe Elahi	17
19	Pyrosequencing Sheds Light on DNA Sequencing breakdown → 2001 ·Genome Research ·Mostafa Ronaghi	551
20	Pyrosequencing Sheds Light on DNA Sequencing 2001 ·Genome Research ·Mostafa Ronaghi	111

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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