Mohammed El-Kebir

2.1k total citations
48 papers, 869 citations indexed

About

Mohammed El-Kebir is a scholar working on Molecular Biology, Cancer Research and Genetics. According to data from OpenAlex, Mohammed El-Kebir has authored 48 papers receiving a total of 869 indexed citations (citations by other indexed papers that have themselves been cited), including 41 papers in Molecular Biology, 28 papers in Cancer Research and 13 papers in Genetics. Recurrent topics in Mohammed El-Kebir's work include Cancer Genomics and Diagnostics (27 papers), Genomics and Phylogenetic Studies (14 papers) and Genetic factors in colorectal cancer (11 papers). Mohammed El-Kebir is often cited by papers focused on Cancer Genomics and Diagnostics (27 papers), Genomics and Phylogenetic Studies (14 papers) and Genetic factors in colorectal cancer (11 papers). Mohammed El-Kebir collaborates with scholars based in United States, Netherlands and Germany. Mohammed El-Kebir's co-authors include Benjamin J. Raphael, Layla Oesper, Denise E. Kirschner, Simeone Marino, Gunnar W. Klau, Gryte Satas, Mohammad Fallahi‐Sichani, Jennifer J. Linderman, Daan P. Geerke and Alan E. Mark and has published in prestigious journals such as Nature Communications, Nature Genetics and Bioinformatics.

In The Last Decade

Mohammed El-Kebir

44 papers receiving 868 citations

Peers

Mohammed El-Kebir

GENET

PFM

Masaharu Hazawa Japan

Harsha P. Gunawardena United States

Yogesh K. Gupta United States

Jessica A. Brown United States

Eric A. Toth United States

Lorraine Everitt United States

Peter Májek Austria

Qi‐Chang Xia China

Hannes Ponstingl United Kingdom

Venkataraman Kabaleeswaran United States

Masaharu Hazawa Japan

Mohammed El-Kebir

915 ×1.7

199 ×0.5

73 ×0.4

GENET

115 ×0.8

37 ×0.3

PFM

Citations per year, relative to Mohammed El-Kebir Mohammed El-Kebir (= 1×) peers Masaharu Hazawa

Countries citing papers authored by Mohammed El-Kebir

Since Specialization

Citations

This map shows the geographic impact of Mohammed El-Kebir's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Mohammed El-Kebir with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Mohammed El-Kebir more than expected).

Fields of papers citing papers by Mohammed El-Kebir

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Mohammed El-Kebir. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Mohammed El-Kebir. The network helps show where Mohammed El-Kebir may publish in the future.

Co-authorship network of co-authors of Mohammed El-Kebir

This figure shows the co-authorship network connecting the top 25 collaborators of Mohammed El-Kebir. A scholar is included among the top collaborators of Mohammed El-Kebir based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Mohammed El-Kebir. Mohammed El-Kebir is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Schmidt, Henri, et al.. (2025). Fast tumor phylogeny regression via tree-structured dual dynamic programming. Bioinformatics. 41(Supplement_1). i170–i179.

Hart, A. A. M., et al.. (2025). Pharming: Joint Clonal Tree Reconstruction of Single-Nucleotide Variant and Copy Number Aberration Evolution from Single-Cell DNA Sequencing of Tumors. Journal of Computational Biology. 33(1). 2–18.

Reiman, Derek, et al.. (2024). Isotype-aware inference of B cell clonal lineage trees from single-cell sequencing data. Cell Genomics. 4(9). 100637–100637.

Stroet, Martin, Bertrand Caron, Marc van Dijk, et al.. (2023). OFraMP: a fragment-based tool to facilitate the parametrization of large molecules. Journal of Computer-Aided Molecular Design. 37(8). 357–371. 11 indexed citations

El-Kebir, Mohammed, et al.. (2023). Consensus Tree Under the Ancestor–Descendant Distance is NP-Hard. Journal of Computational Biology. 31(1). 58–70.

Ochoa, Idoia, et al.. (2023). Phertilizer: Growing a clonal tree from ultra-low coverage single-cell DNA sequencing of tumors. PLoS Computational Biology. 19(10). e1011544–e1011544. 8 indexed citations

Hsu, Silas, et al.. (2022). CNAViz: An interactive webtool for user-guided segmentation of tumor DNA sequencing data. PLoS Computational Biology. 18(10). e1010614–e1010614. 1 indexed citations

Zaccaria, Simone, et al.. (2022). Parsimonious Clone Tree Integration in cancer. Algorithms for Molecular Biology. 17(1). 3–3. 8 indexed citations

El-Kebir, Mohammed, et al.. (2021). Distinguishing linear and branched evolution given single-cell DNA sequencing data of tumors. Algorithms for Molecular Biology. 16(1). 14–14. 2 indexed citations

10.

Satas, Gryte, Simone Zaccaria, Mohammed El-Kebir, & Benjamin J. Raphael. (2021). DeCiFering the elusive cancer cell fraction in tumor heterogeneity and evolution. Cell Systems. 12(10). 1004–1018.e10. 14 indexed citations

11.

El-Kebir, Mohammed, et al.. (2021). Transcriptional Profiling of Porcine HCC Xenografts Provides Insights Into Tumor Cell Microenvironment Signaling. Frontiers in Genetics. 12. 657330–657330. 5 indexed citations

12.

El-Kebir, Mohammed, et al.. (2020). Sampling and summarizing transmission trees with multi-strain infections. Bioinformatics. 36(Supplement_1). i362–i370. 9 indexed citations

13.

Wu, Jiaqi & Mohammed El-Kebir. (2020). ClonArch: visualizing the spatial clonal architecture of tumors. Bioinformatics. 36(Supplement_1). i161–i168. 2 indexed citations

14.

Chia, Nicholas, et al.. (2020). PhyDOSE: Design of follow-up single-cell sequencing experiments of tumors. PLoS Computational Biology. 16(10). e1008240–e1008240. 2 indexed citations

15.

El-Kebir, Mohammed, Gryte Satas, & Benjamin J. Raphael. (2018). Inferring parsimonious migration histories for metastatic cancers. Nature Genetics. 50(5). 718–726. 2 indexed citations

16.

El-Kebir, Mohammed, Benjamin J. Raphael, Ron Shamir, et al.. (2017). Complexity and algorithms for copy-number evolution problems. Algorithms for Molecular Biology. 12(1). 13–13. 23 indexed citations

17.

El-Kebir, Mohammed, Gryte Satas, Layla Oesper, & Benjamin J. Raphael. (2016). Inferring the Mutational History of a Tumor Using Multi-state Perfect Phylogeny Mixtures. Cell Systems. 3(1). 43–53. 91 indexed citations

18.

El-Kebir, Mohammed, Bernd W. Brandt, Jaap Heringa, & Gunnar W. Klau. (2014). NatalieQ: A web server for protein-protein interaction network querying. BMC Systems Biology. 8(1). 40–40. 4 indexed citations

19.

El-Kebir, Mohammed, Martijn van der Kuip, A. Marceline van Furth, & Denise E. Kirschner. (2013). Computational modeling of tuberculous meningitis reveals an important role for tumor necrosis. Journal of Theoretical Biology. 328. 43–53. 8 indexed citations

20.

Marino, Simeone, Mohammed El-Kebir, & Denise E. Kirschner. (2011). A hybrid multi-compartment model of granuloma formation and T cell priming in Tuberculosis. Journal of Theoretical Biology. 280(1). 50–62. 67 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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