Jonathan M. Rothberg

28.1k citations

37 papers · 8.9k indexed · 4 hit papers · h-index 24

Impact in

Molecular Biology top 1%
- Bioinformatics and Genomic Networks
- Fungal and yeast genetics research
- Microbial Metabolic Engineering and Bioproduction
- Genomics and Phylogenetic Studies
- Protein Structure and Dynamics
- RNA and protein synthesis mechanisms
Endocrinology top 1%

Papers in

Aging 1
Molecular Biology 26
- Advanced biosensing and bioanalysis techniques 5
- Ubiquitin and proteasome pathways 5
- Genomics and Phylogenetic Studies 4
- Molecular Biology Techniques and Applications 3

Co-authors: John H. Leamon Meijia Yang Ying Li Traci A. Mansfield Loïc Giot Ted Kalbfleisch Daniel Lockshon Stanley Fields
Journals: Electrophoresis (3 papers)Nature Biotechnology (3 papers)Proceedings of the National Academy of Sciences (3 papers)Blood (2 papers)Nature (2 papers)
Partner nations: United States Germany Switzerland

In The Last Decade

Jonathan M. Rothberg

36 papers receiving 8.6k citations

Hit Papers

align trajectories log scale

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology 2011 · 539 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2011 PLoS ONE
2009 Proceedings of the National Academy of Sciences
2006 Nature
2000 Nature

Peers

Countries citing papers authored by Jonathan M. Rothberg

Since Specialization

Citations

This map shows the geographic impact of Jonathan M. Rothberg's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jonathan M. Rothberg with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jonathan M. Rothberg more than expected).

Fields of papers citing papers by Jonathan M. Rothberg

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jonathan M. Rothberg. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jonathan M. Rothberg. The network helps show where Jonathan M. Rothberg may publish in the future.

Co-authors

The 25 scholars most cited alongside Jonathan M. Rothberg, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Jonathan M. Rothberg Line = papers co-authored together Jonathan M. Rothberg links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	P1.05-017 The Prognostic Impact of EGFR, KRAS and TP53 Somatic Mutations in Curatively Resected Early-Stage Lung Adenocarcinomas Journal of Thoracic Oncology ·Bonnie Gould Rothberg, Rahul Das, Laura Jackson, Heather Lazowski, Yalai Bai, Daniel O’Neill, Sophia Roberts, Jonathan M. Rothberg, Roy S. Herbst, Anthony Kim, Daniel J. Boffa, David L. Rimm, Frank C. Detterbeck, L.T. Tanoue	2017	1
2	Impaired Mitochondrial Dynamics And Mitophagy In Neuronal Models Of Tuberous Sclerosis Complex Cell Reports ·Darius Ebrahimi‐Fakhari, Afshin Saffari, Lara Wahlster, Alessia DiNardo, Daria Turner, Tommy L. Lewis, Christopher Conrad, Jonathan M. Rothberg, Jonathan O. Lipton, Stefan Kölker, Georg F. Hoffmann, Min‐Joon Han, Franck Polleux, Mustafa Şahin	2016	19
3	Semiconductor Sequencing for Life Journal of Biomolecular Techniques JBT ·Jonathan M. Rothberg, Jason W. Myers	2011	2
4	Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology PLoS ONE ·Alexander Mellmann, Dag Harmsen, Craig Cummings, Emily B. Zentz, Shana R. Leopold, Alain Rico, Karola Prior, Rafael Szczepanowski, Yongmei Ji, Wenlan Zhang, Stephen F. McLaughlin, John Henkhaus, Benjamin Leopold, Martina Bielaszewska, Rita Prager, Pius Brzoska, Richard Moore, Simone M Guenther, Jonathan M. Rothberg, Helge Karch Hit paper breakdown →	2011	539
5	Low-Abundance Drug-Resistant Viral Variants in Chronically HIV-Infected, Antiretroviral Treatment–Naive Patients Significantly Impact Treatment Outcomes The Journal of Infectious Diseases ·Birgitte B. Simen, Jan Fredrik Simons, Katherine Huppler Hullsiek, Richard M. Novak, Rodger D. MacArthur, John D. Baxter, Chunli Huang, Christine K Lubeski, Gregory S. Turenchalk, Michael Braverman, Brian Desany, Jonathan M. Rothberg, Michael D. Miller, Michael J. Kozal	2009	318
6	The development and impact of 454 sequencing Nature Biotechnology ·Jonathan M. Rothberg, John H. Leamon	2008	345
7	Cramming More Sequencing Reactions onto Microreactor Chips ChemInform ·John H. Leamon, Jonathan M. Rothberg	2007	0
8	Overview: methods and applications for droplet compartmentalization of biology Nature Methods ·John H. Leamon, Darren R. Link, Michael D. Miller, Jonathan M. Rothberg	2006	56
9	Analysis of one million base pairs of Neanderthal DNA Nature ·Richard E. Green, Johannes Krause, Susan E. Ptak, Adrian W. Briggs, M. T. Ronan, Jan Fredrik Simons, Lei Du, Michael D. Miller, Jonathan M. Rothberg, Maja Paunović, Svante Pääbo Hit paper breakdown →	2006	445
10	Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing BMC Genomics ·Robert Pinard, Alex de Winter, Gary J. Sarkis, Mark Gerstein, Karrie Tartaro, Ramona Plant, Michael D. Miller, Jonathan M. Rothberg, John H. Leamon	2006	249
11	Detection of Oncogenic Mutations in the EGFR Gene in Lung Adenocarcinoma with Differential Sensitivity to EGFR Tyrosine Kinase Inhibitors Cold Spring Harbor Symposia on Quantitative Biology ·Reji Koshy Thomas, Heidi Greulich, Youki Yuza, Janice Lee, Torstein Tengs, William W. Feng, Tao‐Hsing Chen, Elizabeth Nickerson, J Simons, Michael D. Miller, Jonathan M. Rothberg, William R. Sellers, Matthew Meyerson	2005	27
12	A quantitative genomic expression analysis platform for multiplexed in vitro prediction of drug action The Pharmacogenomics Journal ·Erik C. Gunther, David J. Stone, Jonathan M. Rothberg, Robert Gerwien	2005	14
13	Gaining confidence in high-throughput protein interaction networks Nature Biotechnology ·Joel S. Bader, Amitabha Chaudhuri, Jonathan M. Rothberg, John Chant	2003	339
14	The characterization of PPARα ligand drug action in an in vivo model by comprehensive differential gene expression profiling Functional & Integrative Genomics ·Bonnie E. Gould Rothberg, Scott S. Sundseth, Vincent A. DiPippo, Peter J. Brown, Deborah A. Winegar, William K. Gottshalk, Suresh Shenoy, Jonathan M. Rothberg	2001	14
15	PDGF-D, a new protease-activated growth factor Nature Cell Biology ·William J. LaRochelle, Michael Jeffers, William F. McDonald, Rajeev A. Chillakuru, Neill A. Giese, Nathalie A. Lokker, Carol M. Sullivan, Ferenc Boldog, Meijia Yang, Corine Vernet, Catherine E Burgess, Elma R. Fernandes, Lisa L. Deegler, Beth Rittman, Juliette Shimkets, Richard A. Shimkets, Jonathan M. Rothberg, Henri S. Lichenstein	2001	300
16	A transmission imaging spectrograph and microfabricated channel system for DNA analysis Electrophoresis ·John Simpson, Marie C. Ruiz‐Martinez, Greg T. Mulhern, Jan Berka, Darin R. Latimer, J. Ball, Jonathan M. Rothberg, Greg T. Went	2000	31
17	Differential transport of DNA by a rectified Brownian motion device Electrophoresis ·Richard W. Hammond, Joel S. Bader, Steven A. Henck, Michael W. Deem, Gregory A. McDermott, J.M. Bustillo, Jonathan M. Rothberg	2000	34
18	A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae Nature ·Peter Uetz, Loïc Giot, Gerard Cagney, Traci A. Mansfield, Richard Judson, James Knight, Daniel Lockshon, Vaibhav A. Narayan, Maithreyan Srinivasan, Pascale Pochart, Alia Qureshi-Emili, Ying Li, Bailey Godwin, Diana Conover, Ted Kalbfleisch, Govindan Vijayadamodar, Meijia Yang, Mark Johnston, Stanley Fields, Jonathan M. Rothberg Hit paper breakdown →	2000	3577
19	Modularity of the slit protein Journal of Molecular Biology ·Jonathan M. Rothberg, Spyros Artavanis-Tsakonas	1992	65
20	slit: An EGF-homologous locus of D. melanogaster involved in the development of the embryonic central nervous system Cell ·Jonathan M. Rothberg, David A. Hartley, Zenta Walther, Spyros Artavanis‐Tsakonas	1988	238

About Jonathan M. Rothberg

Jonathan M. Rothberg is a scholar working on Aging, Molecular Biology, Bioengineering, Biomedical Engineering and Statistical and Nonlinear Physics, having authored 37 papers that have together received 8.9k indexed citations. Recurring topics across this work include Advanced biosensing and bioanalysis techniques (5 papers), Ubiquitin and proteasome pathways (5 papers), Genomics and Phylogenetic Studies (4 papers), Microfluidic and Capillary Electrophoresis Applications (4 papers), Innovative Microfluidic and Catalytic Techniques Innovation (3 papers), Biosensors and Analytical Detection (3 papers), Molecular Biology Techniques and Applications (3 papers) and stochastic dynamics and bifurcation (3 papers). The work is most often cited by research in Molecular Biology (5.9k citations), Endocrinology (304 citations), Virology (258 citations), Cell Biology (865 citations) and Developmental Neuroscience (178 citations). Jonathan M. Rothberg has collaborated with scholars based in United States, Germany and Switzerland. Frequent co-authors include John H. Leamon, Meijia Yang, Ying Li, Traci A. Mansfield, Loïc Giot, Ted Kalbfleisch, Daniel Lockshon, Stanley Fields, Peter Uetz and Gerard Cagney. Their work appears in journals such as Electrophoresis, Nature Biotechnology, Proceedings of the National Academy of Sciences, Blood and Nature.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact