Spencer Shorte

13.8k total citations · 2 hit papers
86 papers, 5.8k citations indexed

About

Spencer Shorte is a scholar working on Molecular Biology, Biophysics and Cellular and Molecular Neuroscience. According to data from OpenAlex, Spencer Shorte has authored 86 papers receiving a total of 5.8k indexed citations (citations by other indexed papers that have themselves been cited), including 47 papers in Molecular Biology, 29 papers in Biophysics and 15 papers in Cellular and Molecular Neuroscience. Recurrent topics in Spencer Shorte's work include Advanced Fluorescence Microscopy Techniques (24 papers), Cell Image Analysis Techniques (15 papers) and bioluminescence and chemiluminescence research (10 papers). Spencer Shorte is often cited by papers focused on Advanced Fluorescence Microscopy Techniques (24 papers), Cell Image Analysis Techniques (15 papers) and bioluminescence and chemiluminescence research (10 papers). Spencer Shorte collaborates with scholars based in France, United States and Germany. Spencer Shorte's co-authors include Jean-Yves Tinévez, Sebastian Y. Bednarek, Nick Perry, Emmanuel Laplantine, Kevin W. Eliceiri, Gregory D. Reynolds, Johannes Schindelin, Friedrich Frischknecht, Sabine Thiberge and Robert Ménard and has published in prestigious journals such as Cell, Proceedings of the National Academy of Sciences and Journal of Biological Chemistry.

In The Last Decade

Spencer Shorte

86 papers receiving 5.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

TrackMate: An open and extensible platform for single-particle tracking

2016 2.1k citations Jean-Yves Tinévez, Spencer Shorte et al. profile →
Screening out irrelevant cell-based models of disease

2016 374 citations Nathalie Aulner, Spencer Shorte et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Spencer Shorte France	30	2.4k	1.0k	814	804	798	86	5.8k
Paul Walther Germany	47	3.6k 1.5×	896 0.9×	1.1k 1.3×	1.3k 1.6×	264 0.3×	256	9.9k
Jean‐Christophe Olivo‐Marín France	53	4.2k 1.8×	393 0.4×	1.4k 1.7×	1.0k 1.3×	2.2k 2.8×	224	10.7k
Carlos Óscar S. Sorzano Spain	42	3.4k 1.4×	287 0.3×	390 0.5×	384 0.5×	441 0.6×	250	7.8k
John M. Murray United States	51	3.3k 1.4×	532 0.5×	751 0.9×	312 0.4×	288 0.4×	197	7.8k
Lucy Collinson United Kingdom	47	3.0k 1.3×	312 0.3×	2.1k 2.6×	320 0.4×	571 0.7×	128	6.8k
Alasdair W. McDowall United States	32	3.4k 1.4×	373 0.4×	718 0.9×	470 0.6×	348 0.4×	55	7.0k
John H. Connor United States	40	2.6k 1.1×	387 0.4×	418 0.5×	1.1k 1.3×	163 0.2×	144	5.7k
Henning Stahlberg Switzerland	56	7.5k 3.2×	364 0.4×	920 1.1×	696 0.9×	268 0.3×	220	12.3k
Avi Mayo Israel	40	2.8k 1.2×	236 0.2×	589 0.7×	486 0.6×	232 0.3×	90	5.9k
Mark J. Miller United States	52	3.2k 1.3×	471 0.5×	441 0.5×	733 0.9×	622 0.8×	138	11.2k

Countries citing papers authored by Spencer Shorte

Since Specialization

Citations

This map shows the geographic impact of Spencer Shorte's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Spencer Shorte with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Spencer Shorte more than expected).

Fields of papers citing papers by Spencer Shorte

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Spencer Shorte. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Spencer Shorte. The network helps show where Spencer Shorte may publish in the future.

Co-authorship network of co-authors of Spencer Shorte

This figure shows the co-authorship network connecting the top 25 collaborators of Spencer Shorte. A scholar is included among the top collaborators of Spencer Shorte based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Spencer Shorte. Spencer Shorte is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Danckaert, Anne, et al.. (2023). MuscleJ2: a rebuilding of MuscleJ with new features for high-content analysis of skeletal muscle immunofluorescence slides. Skeletal Muscle. 13(1). 14–14. 7 indexed citations

Krentzel, Daniel, Spencer Shorte, & Christophe Zimmer. (2023). Deep learning in image-based phenotypic drug discovery. Trends in Cell Biology. 33(7). 538–554. 38 indexed citations

Herbert, Sébastien, Léo Valon, Nicolas Dray, et al.. (2021). LocalZProjector and DeProj: a toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images. BMC Biology. 19(1). 136–136. 25 indexed citations

Tinévez, Jean-Yves, Ellen T. Arena, Mark Anderson, et al.. (2019). Shigella-mediated oxygen depletion is essential for intestinal mucosa colonization. Nature Microbiology. 4(11). 2001–2009. 24 indexed citations

Charles‐Orszag, Arthur, Feng‐Ching Tsai, Daria Bonazzi, et al.. (2018). Adhesion to nanofibers drives cell membrane remodeling through one-dimensional wetting. Nature Communications. 9(1). 4450–4450. 19 indexed citations

Verdonk, Franck, Pascal Roux, Patricia Flamant, et al.. (2016). Phenotypic clustering: a novel method for microglial morphology analysis. Journal of Neuroinflammation. 13(1). 153–153. 94 indexed citations

Mellouk, Nora, Allon Weiner, Nathalie Aulner, et al.. (2014). Shigella Subverts the Host Recycling Compartment to Rupture Its Vacuole. Cell Host & Microbe. 16(4). 517–530. 81 indexed citations

Sorusch, Nasrin, Iman Sahly, Spencer Shorte, et al.. (2013). The giant spectrin βV couples the molecular motors to phototransduction and Usher syndrome type I proteins along their trafficking route. Human Molecular Genetics. 22(18). 3773–3788. 33 indexed citations

Tinévez, Jean-Yves, Pascal Roux, Emmanuelle Perret, et al.. (2012). A Quantitative Method for Measuring Phototoxicity of a Live Cell Imaging Microscope. Methods in enzymology on CD-ROM/Methods in enzymology. 506. 291–309. 56 indexed citations

10.

Morales, Miguel A., Olivier Renaud, Wolfgang Faigle, Spencer Shorte, & Gérald F. Späth. (2007). Over-expression of Leishmania major MAP kinases reveals stage-specific induction of phosphotransferase activity. International Journal for Parasitology. 37(11). 1187–1199. 45 indexed citations

11.

Mota, Luı́s Jaime, et al.. (2007). The SPI-2 type III secretion system restricts motility of Salmonella-containing vacuoles. Cellular Microbiology. 9(10). 2517–2529. 60 indexed citations

12.

Thiberge, Sabine, Samantha Blazquez, Patricia Baldacci, et al.. (2007). In vivo imaging of malaria parasites in the murine liver. Nature Protocols. 2(7). 1811–1818. 70 indexed citations

13.

Amino, Rogério, Sabine Thiberge, Samantha Blazquez, et al.. (2007). Imaging malaria sporozoites in the dermis of the mammalian host. Nature Protocols. 2(7). 1705–1712. 62 indexed citations

14.

Frischknecht, Friedrich, Olivier Renaud, & Spencer Shorte. (2006). Imaging today's infectious animalcules. Current Opinion in Microbiology. 9(3). 297–306. 21 indexed citations

15.

Arhel, Nathalie J., Auguste Genovesio, Kyeong-Ae Kim, et al.. (2006). Quantitative four-dimensional tracking of cytoplasmic and nuclear HIV-1 complexes. Nature Methods. 3(10). 817–824. 225 indexed citations

16.

Amino, Rogério, Sabine Thiberge, Béatrice Martin, et al.. (2006). Quantitative imaging of Plasmodium transmission from mosquito to mammal. Nature Medicine. 12(2). 220–224. 421 indexed citations

17.

Balabanian, Karl, Julie Harriague, Bernard Lagane, et al.. (2004). CXCR4-Tropic HIV-1 Envelope Glycoprotein Functions as a Viral Chemokine in Unstimulated Primary CD4+ T Lymphocytes. The Journal of Immunology. 173(12). 7150–7160. 74 indexed citations

18.

Shorte, Spencer, Gilles M. Leclerc, Rafael Vázquez-Martı́nez, et al.. (2002). PRL Gene Expression in Individual Living Mammotropes Displays Distinct Functional Pulses That Oscillate in a Noncircadian Temporal Pattern. Endocrinology. 143(3). 1126–1133. 23 indexed citations

19.

David‐Watine, Brigitte, Spencer Shorte, Sergio Fucile, et al.. (1999). Functional integrity of green fluorescent protein conjugated glycine receptor channels. Neuropharmacology. 38(6). 785–792. 20 indexed citations

20.

Shorte, Spencer, Graham L. Collingridge, Andrew D. Randall, Joseph Chappell, & J.G. Schofield. (1991). Ammonium ions mobilize calcium from an internal pool which is insensitive to TRH and ionomycin in bovine anterior pituitary cells. Cell Calcium. 12(4). 301–312. 31 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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