Jonathan Fine

2.8k total citations · 1 hit paper
56 papers, 1.4k citations indexed

About

Jonathan Fine is a scholar working on Molecular Biology, Computational Theory and Mathematics and Spectroscopy. According to data from OpenAlex, Jonathan Fine has authored 56 papers receiving a total of 1.4k indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Molecular Biology, 16 papers in Computational Theory and Mathematics and 8 papers in Spectroscopy. Recurrent topics in Jonathan Fine's work include Computational Drug Discovery Methods (15 papers), Analytical Chemistry and Chromatography (5 papers) and Protein Structure and Dynamics (3 papers). Jonathan Fine is often cited by papers focused on Computational Drug Discovery Methods (15 papers), Analytical Chemistry and Chromatography (5 papers) and Protein Structure and Dynamics (3 papers). Jonathan Fine collaborates with scholars based in United States, United Kingdom and India. Jonathan Fine's co-authors include Gaurav Chopra, Lan Kong, Melinda Carter, Lisa A. Weissfeld, John A. Kellum, Derek C. Angus, Gina D’Angelo, Sachin Yende, Robert D. Welch and Krupal P. Jethava and has published in prestigious journals such as Nature, Angewandte Chemie International Edition and The Journal of Chemical Physics.

In The Last Decade

Jonathan Fine

51 papers receiving 1.4k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Neurotoxic reactive astrocytes induce cell death via saturated lipids

2021 361 citations Kevin A. Guttenplan, Maya K. Weigel et al. Nature profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Jonathan Fine United States	16	321	262	223	147	115	56	1.4k
Hua Chen United States	31	580 1.8×	306 1.2×	88 0.4×	186 1.3×	186 1.6×	189	3.1k
Di Xiao China	23	508 1.6×	242 0.9×	66 0.3×	103 0.7×	87 0.8×	75	1.9k
Huiguo Liu China	23	473 1.5×	306 1.2×	54 0.2×	423 2.9×	112 1.0×	102	3.6k
QuanQiu Wang United States	14	332 1.0×	96 0.4×	89 0.4×	101 0.7×	42 0.4×	20	1.4k
Steven M. Butler United States	22	420 1.3×	213 0.8×	90 0.4×	496 3.4×	44 0.4×	46	3.1k
Lachlan MacGregor Australia	30	344 1.1×	1.0k 4.0×	136 0.6×	628 4.3×	77 0.7×	51	3.8k
Yongnan Li China	21	404 1.3×	126 0.5×	64 0.3×	162 1.1×	60 0.5×	108	1.5k
Raymond Pratt United States	24	382 1.2×	113 0.4×	474 2.1×	416 2.8×	17 0.1×	65	2.8k
Norbert Benda Germany	21	179 0.6×	302 1.2×	39 0.2×	157 1.1×	21 0.2×	83	1.9k

Countries citing papers authored by Jonathan Fine

Since Specialization

Citations

This map shows the geographic impact of Jonathan Fine's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jonathan Fine with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jonathan Fine more than expected).

Fields of papers citing papers by Jonathan Fine

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jonathan Fine. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jonathan Fine. The network helps show where Jonathan Fine may publish in the future.

Co-authorship network of co-authors of Jonathan Fine

This figure shows the co-authorship network connecting the top 25 collaborators of Jonathan Fine. A scholar is included among the top collaborators of Jonathan Fine based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jonathan Fine. Jonathan Fine is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

1.

Fine, Jonathan, et al.. (2025). Paddy: an evolutionary optimization algorithm for chemical systems and spaces. Digital Discovery. 4(5). 1352–1371. 1 indexed citations

2.

Wijewardhane, Prageeth R., Katelyn Smith, Jonathan Fine, et al.. (2025). Recurrent Neural Networks Predict Future Peptide Aggregation for Drug Development. Molecular Pharmaceutics. 22(11). 6552–6560.

3.

Wang, Jun, Jonathan Fine, Erik L. Regalado, et al.. (2025). Purification of Pharmaceuticals via Retention Time Prediction: Leveraging Graph Isomorphism Networks, Limited Data, and Transfer Learning. Journal of Separation Science. 48(6). e70178–e70178. 1 indexed citations

4.

Fine, Jonathan, et al.. (2024). Machine learning models and performance dependency on 2D chemical descriptor space for retention time prediction of pharmaceuticals. Journal of Chromatography A. 1730. 465109–465109. 6 indexed citations

5.

Fine, Jonathan, Leonardo R. Allain, Joerg Schlingemann, et al.. (2023). Nitrosamine acceptable intakes should consider variation in molecular weight: The implication of stoichiometric DNA damage. Regulatory Toxicology and Pharmacology. 145. 105505–105505. 12 indexed citations

6.

Fine, Jonathan, Prageeth R. Wijewardhane, Katelyn Smith, et al.. (2023). Learning Relationships Between Chemical and Physical Stability for Peptide Drug Development. Pharmaceutical Research. 40(3). 701–710. 3 indexed citations

7.

Prakash, Priya, Kanchan Bisht, Kaushik Sharma, et al.. (2023). Amyloid β Induces Lipid Droplet‐Mediated Microglial Dysfunction in Alzheimer’s Disease. Alzheimer s & Dementia. 19(S13). 2 indexed citations

8.

Falls, Zackary, Jonathan Fine, Gaurav Chopra, & Ram Samudrala. (2022). Accurate Prediction of Inhibitor Binding to HIV-1 Protease Using CANDOCK. Frontiers in Chemistry. 9. 775513–775513. 2 indexed citations

9.

Guttenplan, Kevin A., Maya K. Weigel, Priya Prakash, et al.. (2021). Neurotoxic reactive astrocytes induce cell death via saturated lipids. Nature. 599(7883). 102–107. 361 indexed citations breakdown →

10.

Jethava, Krupal P., et al.. (2020). Accelerated Reactivity Mechanism and Interpretable Machine Learning Model of N -Sulfonylimines toward Fast Multicomponent Reactions. Organic Letters. 22(21). 8480–8486. 21 indexed citations

11.

Fine, Jonathan, Ana Casañal, Gaurav Chopra, et al.. (2020). A 2‐Tyr‐1‐carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase. Angewandte Chemie. 132(39). 17109–17114. 1 indexed citations

12.

Fine, Jonathan, Ana Casañal, Gaurav Chopra, et al.. (2020). A 2‐Tyr‐1‐carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase. Angewandte Chemie International Edition. 59(39). 16961–16966. 11 indexed citations

13.

Fine, Jonathan, et al.. (2020). Spectral deep learning for prediction and prospective validation of functional groups. Chemical Science. 11(18). 4618–4630. 90 indexed citations

14.

Fine, Jonathan & Gaurav Chopra. (2019). Lemon: a framework for rapidly mining structural information from the Protein Data Bank. Bioinformatics. 35(20). 4165–4167. 2 indexed citations

15.

Fine, Jonathan & Gaurav Chopra. (2018). CANDOCK: Conformational Entropy Driven Analytics for Class-Specific Proteome-Wide Docking. Biophysical Journal. 114(3). 57a–57a. 2 indexed citations

16.

Fine, Jonathan, et al.. (2015). Effectiveness of Repeated Courses of Pulmonary Rehabilitation on Functional Exercise Capacity in Patients With COPD. Journal of Cardiopulmonary Rehabilitation and Prevention. 35(4). 272–277. 4 indexed citations

17.

Fine, Jonathan, et al.. (2011). Implementation of therapeutic hypothermia after cardiac arrest--a telephone survey of Connecticut hospitals.. PubMed. 75(4). 203–6. 2 indexed citations

18.

Hirano, Kathleen, Vadim V. Shmanai, Beth N. Marbois, et al.. (2010). Isotope-reinforced polyunsaturated fatty acids protect yeast cells from oxidative stress. Free Radical Biology and Medicine. 50(1). 130–138. 62 indexed citations

19.

Yende, Sachin, Gina D’Angelo, John A. Kellum, et al.. (2008). Inflammatory Markers at Hospital Discharge Predict Subsequent Mortality after Pneumonia and Sepsis. American Journal of Respiratory and Critical Care Medicine. 177(11). 1242–1247. 317 indexed citations

20.

Fine, Jonathan. (1967). Glycosuria of pregnancy.. BMJ. 1(5534). 205–210. 9 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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