John Penders

18.2k citations

169 papers · 11.8k indexed · 7 hit papers · h-index 51

Impact in

Molecular Medicine top 0.2%
- Antibiotic Resistance in Bacteria
Applied Microbiology and Biotechnology top 0.5%

Papers in

Molecular Medicine 21
- Antibiotic Resistance in Bacteria 21
Endocrinology 13

Co-authors: Carel Thijs Ellen E. Stobberingh Piet A. van den Brandt Ischa Kummeling Foekje F. Stelma Bianca E.P. Snijders Cornelis Vink Petra Wolffs
Journals: Gut Microbes (11 papers)Scientific Reports (10 papers)PLoS ONE (8 papers)Frontiers in Microbiology (7 papers)Future Microbiology (6 papers)
Partner nations: Netherlands Germany United States

In The Last Decade

John Penders

164 papers receiving 11.5k citations

Hit Papers

7 papers align trajectories log scale

microViz: an R package for microbiome data visualization and statistics 2021 · 259 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2021 The Journal of Open Source Software
2020 Gut
2020 Gastroenterology
2016 Frontiers in Microbiology
2016 The Lancet Infectious Diseases
2006 PEDIATRICS
2006 Gut

Peers

Countries citing papers authored by John Penders

Since Specialization

Citations

This map shows the geographic impact of John Penders's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by John Penders with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites John Penders more than expected).

Fields of papers citing papers by John Penders

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by John Penders. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by John Penders. The network helps show where John Penders may publish in the future.

Co-authorship network

The 25 scholars most cited alongside John Penders, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with John Penders Line = papers co-authored together John Penders links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	A head-to-head comparison of soluble dietary fibers on microbiota composition and short-chain fatty acid production using the in vitro TIM-2 system Carbohydrate Polymers ·Yanyun Zhang, Daniel C. Schrinsky, 渡邉聡彦, Arquimedes Paixão Santana-Filho, Koen Venema, B. D. Carter, John Penders, Daisy Jonkers, Jorge Enrique Bueno O.	2025	0
2	Effects of a slowly fermentable fiber mixture against the background of a high-protein diet on insulin sensitivity and metabolic health in individuals with overweight: a randomized, placebo-controlled trial Gut Microbes ·尹利群, Yilan Du, 宗俊深川, Gianluca Galazzo, David Barnett, John Penders, 哲彦平田, 野澤俊彦, NEMANJA DRAGULJEVIC, ゆき緒本郷	2025	0
3	The individual response to antibiotics and diet — insights into gut microbial resilience and host metabolism Nature Reviews Endocrinology ·久泰佐藤, John Penders, Arjen Nauta, Erwin G. Zoetendal, Ellen E. Blaak	2024	28
4	Examination of sex-specific interactions between gut microbiota and host metabolism after 12-week combined polyphenol supplementation in individuals with overweight or obesity Gut Microbes ·Kelly M. Jardon, Gijs H. Goossens, Jasper Most, Gianluca Galazzo, Koen Venema, John Penders, Ellen E. Blaak	2024	11
5	Diet and risk of atrial fibrillation: a systematic review European Heart Journal ·Monika Gawałko, Melissa E. Middeldorp, Arnela Saljic, John Penders, Thomas Jespersen, Christine M. Albert, Gregory M. Marcus, Christopher X. Wong, Prashanthan Sanders, Dominik Linz	2024	5
6	Human milk oligosaccharides, antimicrobial drugs, and the gut microbiota of term neonates: observations from the KOALA birth cohort study Gut Microbes ·David Barnett, О. И. Гревцева, F. D. Magalhães, Fangjie Gu, Carel Thijs, Arjen Nauta, Henk A. Schols, Hauke Smidt, Ilja C.W. Arts, John Penders	2023	27
7	Fecal levels of SCFA and BCFA during capecitabine in patients with metastatic or unresectable colorectal cancer Clinical and Experimental Medicine ·Janine Ziemons, Romy Aarnoutse, D. Tomacek, C. Sloby, Naif Mansour Mathkur, Judith de Vos‐Geelen, Liselot Valkenburg‐van Iersel, Irene E.G. van Hellemond, Geert-Jan Creemers, Arnold Baars, RonaldD. Macfarlane, John Penders, Koen Venema, Marjolein L. Smidt	2023	8
8	Fecal carriage of vanB antibiotic resistance gene affects adipose tissue function under vancomycin use Gut Microbes ·久泰佐藤, Ngoc Giang Le, Merna Shenouda, Dorien Reijnders, Gijs H. Goossens, Erwin G. Zoetendal, John Penders, Ellen E. Blaak	2022	2
9	Changes in intestinal microbiota in postmenopausal oestrogen receptor-positive breast cancer patients treated with (neo)adjuvant chemotherapy npj Breast Cancer ·Romy Aarnoutse, Janine Ziemons, C. Sloby, Judith de Vos‐Geelen, Maaike de Boer, T. M Starzhina, Birgit E. P. J. Vriens, Mizuki Fukumori, Agnès J. van de Wouw, Ngoc Giang Le, Koen Venema, Sander S. Rensen, John Penders, Marjolein L. Smidt	2022	28
10	Enterobacteriaceae and Bacteroidaceae provide resistance to travel-associated intestinal colonization by multi-drug resistant Escherichia coli Gut Microbes ·Matthew Davies, Gianluca Galazzo, Jarne M. van Hattem, Maris S. Arcilla, Damian C. Melles∗, Menno D. de Jong, Constance Schultsz, Petra Wolffs, Alan McNally, Willem van Schaik, John Penders	2022	16
11	The Role of Intestinal Microbiota in Metastatic Colorectal Cancer Patients Treated With Capecitabine Clinical Colorectal Cancer ·Romy Aarnoutse, Janine Ziemons, Judith de Vos‐Geelen, Liselot Valkenburg‐van Iersel, Iván José Salas García, A. C. CRUNDWELL, Geert-Jan Creemers, Arnold Baars, 刘东滨, Ngoc Giang Le, David Barnett, Sander S. Rensen, John Penders, Marjolein L. Smidt	2021	10
12	Intestinal Microbiota in Postmenopausal Breast Cancer Patients and Controls Cancers ·Romy Aarnoutse, C. Sloby, Janine Ziemons, Judith de Vos‐Geelen, Maaike de Boer, Tatiana Emy Nishimoto Kawanami Hamamoto, Birgit E. P. J. Vriens, Yvonne van Riet, Mizuki Fukumori, Agnès J. van de Wouw, Ngoc Giang Le, Koen Venema, Sander S. Rensen, John Penders, Marjolein L. Smidt	2021	28
13	Gut microbiota, dysbiosis and atrial fibrillation. Arrhythmogenic mechanisms and potential clinical implications Cardiovascular Research ·Monika Gawałko, Thomas A. Agbaedeng, Arnela Saljic, Dominik N. Müller, Nicola Wilck, Renate B. Schnabel, John Penders, Michiel Rienstra, Isabelle C. Van Gelder, Thomas Jespersen, Ulrich Schotten, Harry J.G.M. Crijns, Jonathan M. Kalman, Prashanthan Sanders, Stanley Nattel, Dobromir Dobrev, Dominik Linz	2021	82
14	Infants’ First Solid Foods: Impact on Gut Microbiota Development in Two Intercontinental Cohorts Nutrients ·Antoine (15..-1630). Auteur du texte Rambaud, Rivaldo Giovano Totos, Sara Dizzell, Liene Bervoets, Julia Simioni, Farnoush Ghodsi, Elizabeth Gunn, Michael G. Surette, Russell J. de Souza, Monique Mommers, Eileen K. Hutton, Katherine M. Morrison, John Penders, Niels van Best, Jennifer C. Stearns	2021	56
15	microViz: an R package for microbiome data visualization and statistics The Journal of Open Source Software ·David Barnett, Ilja C.W. Arts, John Penders Hit paper breakdown →	2021	259
16	Bile acids drive the newborn’s gut microbiota maturation Nature Communications ·Niels van Best, Ulrike Rolle‐Kampczyk, Frank G. Schaap, Marijana Basic, Steven W.M. Olde Damink, André Bleich, Paul H. M. Savelkoul, Martin von Bergen�, John Penders, Mathias W. Hornef	2020	139
17	The effect of prebiotic fortified infant formulas on microbiota composition and dynamics in early life Scientific Reports ·Klaudyna Borewicz, María Suárez‐Diez, Christine Hechler, Roseriet Beijers, Carolina de Weerth, Ilja C.W. Arts, John Penders, Carel Thijs, Arjen Nauta, Cordula Lindner, Patricia Haitink, Elaine E. Vaughan, Hauke Smidt	2019	71
18	The Canmore Declaration: Statement of Principles for Planetary Health SHILAP Revista de lepidopterología ·Susan L. Prescott, Alan Logan, Glenn Albrecht, Dianne E. Campbell, Julian Crane, Ashlee Cunsolo, John W. Holloway, Anita L. Kozyrskyj, Christopher A. Lowry, John Penders, Nicole Redvers, Harald Renz, Jakob Stokholm, Cecilie Svanes, Ganesa Wegienka, (unknown)	2018	79
19	Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction Scientific Reports ·Sébastien Matamoros, Jarne M. van Hattem, Maris S. Arcilla, Niels Willemse, Damian C. Melles∗, John Penders, S-Y Kho, Ngô Thị Hoa, Martin Bootsma, Perry J.J. van Genderen, Abraham Goorhuis, Martin P. Grobusch, Nicky Molhoek, Astrid M. L. Oude Lashof, Ellen E. Stobberingh, Henri A. Verbrugh, Menno D. de Jong, Constance Schultsz	2017	205
20	Factors Influencing the Composition of the Intestinal Microbiota in Early Infancy PEDIATRICS ·John Penders, Carel Thijs, Cornelis Vink, Foekje F. Stelma, Bianca E.P. Snijders, Ischa Kummeling, Piet A. van den Brandt, Ellen E. Stobberingh Hit paper breakdown →	2006	1646

About John Penders

John Penders is a scholar working on Molecular Medicine, Endocrinology, Emergency Medical Services, Pharmacy and Infectious Diseases, having authored 169 papers that have together received 11.8k indexed citations. Recurring topics across this work include Gut microbiota and health (98 papers), Clostridium difficile and Clostridium perfringens research (24 papers), Diet and metabolism studies (22 papers), Antibiotic Resistance in Bacteria (21 papers), Asthma and respiratory diseases (20 papers), Pediatric health and respiratory diseases (15 papers), Dermatology and Skin Diseases (13 papers) and Inflammatory Bowel Disease (13 papers). The work is most often cited by research in Molecular Medicine (1.4k citations), Applied Microbiology and Biotechnology (326 citations), Gastroenterology (863 citations), Pharmacy (652 citations) and Endocrinology (583 citations). John Penders has collaborated with scholars based in Netherlands, Germany and United States. Frequent co-authors include Carel Thijs, Ellen E. Stobberingh, Piet A. van den Brandt, Ischa Kummeling, Foekje F. Stelma, Bianca E.P. Snijders, Cornelis Vink, Petra Wolffs, Paul H. M. Savelkoul and Christian J. H. von Wintersdorff. Their work appears in journals such as Gut Microbes, Scientific Reports, PLoS ONE, Frontiers in Microbiology and Future Microbiology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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