Jacques van Helden

11.6k total citations · 2 hit papers
92 papers, 6.4k citations indexed

About

Jacques van Helden is a scholar working on Molecular Biology, Plant Science and Genetics. According to data from OpenAlex, Jacques van Helden has authored 92 papers receiving a total of 6.4k indexed citations (citations by other indexed papers that have themselves been cited), including 75 papers in Molecular Biology, 9 papers in Plant Science and 7 papers in Genetics. Recurrent topics in Jacques van Helden's work include Genomics and Chromatin Dynamics (33 papers), Genomics and Phylogenetic Studies (26 papers) and RNA and protein synthesis mechanisms (22 papers). Jacques van Helden is often cited by papers focused on Genomics and Chromatin Dynamics (33 papers), Genomics and Phylogenetic Studies (26 papers) and RNA and protein synthesis mechanisms (22 papers). Jacques van Helden collaborates with scholars based in Belgium, France and Mexico. Jacques van Helden's co-authors include Sylvain Brohée, Julio Collado‐Vides, Bruno André, Morgane Thomas‐Chollier, Matthieu Defrance, Gipsi Lima‐Mendez, Denis Thieffry, Olivier Sand, Ariane Toussaint and Raphaël Leplae and has published in prestigious journals such as Nucleic Acids Research, Nature Genetics and Bioinformatics.

In The Last Decade

Jacques van Helden

91 papers receiving 6.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Evaluation of clustering algorithms for protein-protein interaction networks

2006 610 citations Sylvain Brohée, Jacques van Helden BMC Bioinformatics profile →
Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies 1 1Edited by G. von Heijne

1998 554 citations Jacques van Helden, Julio Collado‐Vides et al. profile →

Peers

Countries citing papers authored by Jacques van Helden

Since Specialization

Citations

This map shows the geographic impact of Jacques van Helden's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jacques van Helden with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jacques van Helden more than expected).

Fields of papers citing papers by Jacques van Helden

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jacques van Helden. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jacques van Helden. The network helps show where Jacques van Helden may publish in the future.

Co-authorship network of co-authors of Jacques van Helden

This figure shows the co-authorship network connecting the top 25 collaborators of Jacques van Helden. A scholar is included among the top collaborators of Jacques van Helden based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jacques van Helden. Jacques van Helden is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	FAIR+E pathogen data for surveillance and research: lessons from COVID-19 2023 ·Frontiers in Public Health ·Aitana Neves, Isabel Cuesta, Erik Hjerde, Terje Klemetsen, David Salgado, Jacques van Helden, Nadim Rahman, Nazeefa Fatima, Nestoras Karathanasis, Paweł Zmora, (unknown), Sushma Nagaraja Grellscheid, Zahra Waheed, Niklas Blomberg	1
2	RSAT 2022: regulatory sequence analysis tools 2022 ·Nucleic Acids Research ·Walter Santana-Garcia, Jaime A. Castro-Mondragón, (unknown), Nga Thi Thuy Nguyen, (unknown), (unknown), (unknown), Denis Thieffry, Pierre Vincens, Bruno Contreras‐Moreira, Jacques van Helden, Morgane Thomas‐Chollier, Alejandra Medina-Rivera	45
3	Comment of a critical review about the origins of SARS-CoV-2 2021 ·Zenodo (CERN European Organization for Nuclear Research) ·François Graner, Virginie Courtier‐Orgogozo, Étienne Decroly, Colin D. Butler, Richard H. Ebright, (unknown), Bernd Kaina, Monali C. Rahalkar, José Halloy, Rahul A. Bahulikar, Günter Theißen, Milton Leitenberg, Sergé Morand, Hideki Kakeya, Jean‐Michel Claverie, Jacques van Helden	1
4	Ten Simples Rules on How to Organise a Bioinformatics Hackathon 2021 ·EMBnet journal ·Susanne Hollmann, Babette Regierer, Teresa K. Attwood, Andreas Gisel, Jacques van Helden, Grégoire Rossier, Paul Kersey, Eija Roine, Gert Vriend, Erik Bongcam‐Rudloff	1
5	Tracing the origins of SARS-COV-2 in coronavirus phylogenies: a review 2021 ·Environmental Chemistry Letters ·Erwan Sallard, José Halloy, Didier Casañe, Étienne Decroly, Jacques van Helden	36
6	Tuning promoter boundaries improves regulatory motif discovery in nonmodel plants: the peach example 2020 ·PLANT PHYSIOLOGY ·(unknown), Jaime A. Castro-Mondragón, (unknown), Jacques van Helden, Bruno Contreras‐Moreira, Yolanda Gogorcena Aoiz	22
7	Redefining fundamental concepts of transcription initiation in bacteria 2020 ·Nature Reviews Genetics ·(unknown), Stephen Busby, Joseph T. Wade, Jacques van Helden, Adam P. Arkin, Gary D. Stormo, Karen Eilbeck, Bernhard Ø. Palsson, James E. Galagan, Julio Collado‐Vides	93
8	In vitro screening of a FDA approved chemical library reveals potential inhibitors of SARS-CoV-2 replication 2020 ·Scientific Reports ·Franck Touret, Magali Gilles, Karine Barral, Antoine Nougaırède, Jacques van Helden, Étienne Decroly, Xavier de Lamballerie, Bruno Coutard	261
9	Sub-microscopic Plasmodium falciparum infections in matched peripheral, placental and umbilical cord blood samples from asymptomatic Congolese women at delivery 2019 ·Acta Tropica ·(unknown), Félix Koukouikila-Koussounda, Francine Ntoumi, (unknown), (unknown), Christevy Vouvoungui, Jacques van Helden, (unknown)	9
10	Sequanix: a dynamic graphical interface for Snakemake workflows 2018 ·Bioinformatics ·(unknown), Rachel Legendre, (unknown), Christiane Bouchier, Jacques van Helden, Sean Kennedy, Thomas Cokelaer	10
11	RSAT 2018: regulatory sequence analysis tools 20th anniversary 2018 ·Nucleic Acids Research ·Nga Thi Thuy Nguyen, Bruno Contreras‐Moreira, Jaime A. Castro-Mondragón, Walter Santana-Garcia, Raúl Ossio, Carla Daniela Robles‐Espinoza, Mathieu Bahin, Samuel Collombet, Pierre Vincens, Denis Thieffry, Jacques van Helden, Alejandra Medina-Rivera, Morgane Thomas‐Chollier	122
12	Coordinated response of the Desulfovibrio desulfuricans 27774 transcriptome to nitrate, nitrite and nitric oxide 2017 ·Scientific Reports ·Ian T. Cadby, Matthew Faulkner, Jeanne Chèneby, (unknown), Jacques van Helden, Alain Dolla, (unknown)	21
13	RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections 2017 ·Nucleic Acids Research ·Jaime A. Castro-Mondragón, Sébastien Jaeger, Denis Thieffry, Morgane Thomas‐Chollier, Jacques van Helden	70
14	RSAT 2015: Regulatory Sequence Analysis Tools 2015 ·Nucleic Acids Research ·Alejandra Medina-Rivera, Matthieu Defrance, Olivier Sand, Carl Herrmann, Jaime A. Castro-Mondragón, Jérémy Delerce, Sébastien Jaeger, Christophe Blanchet, Pierre Vincens, Christophe Caron, D. Staines, Bruno Contreras‐Moreira, (unknown), (unknown), Céline Hernandez, Denis Thieffry, Morgane Thomas‐Chollier, Jacques van Helden	191
15	Bacterial Molecular Networks: Methods and Protocols, 804 2012 ·Dépôt institutionnel de l'Université libre de Bruxelles (Université Libre de Bruxelles) ·Jacques van Helden, Ariane Toussaint, Denis Thieffry	18
16	The powerful law of the power law and other myths in network biology 2009 ·Molecular BioSystems ·Gipsi Lima‐Mendez, Jacques van Helden	136
17	Evaluation of clustering algorithms for protein-protein interaction networks breakdown → 2006 ·BMC Bioinformatics ·Sylvain Brohée, Jacques van Helden	610
18	Metrics for comparing regulatory sequences on the basis of pattern counts 2004 ·HAL (Le Centre pour la Communication Scientifique Directe) ·Jacques van Helden	50
19	Graph-Based Analysis of Metabolic Networks 2002 ·PubMed ·Jacques van Helden, Lorenz Wernisch, David Gilbert, Shoshana J. Wodak	38
20	The iroquois complex controls the somatotopy of Drosophila notum mechanosensory projectionss 1998 ·Development ·(unknown), Jacques van Helden, Christine Dambly‐Chaudière, Alain Ghysen	34

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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