Ilya Shlyakhter

27.5k total citations · 1 hit paper
19 papers, 1.5k citations indexed

About

Ilya Shlyakhter is a scholar working on Artificial Intelligence, Computational Theory and Mathematics and Software. According to data from OpenAlex, Ilya Shlyakhter has authored 19 papers receiving a total of 1.5k indexed citations (citations by other indexed papers that have themselves been cited), including 7 papers in Artificial Intelligence, 5 papers in Computational Theory and Mathematics and 4 papers in Software. Recurrent topics in Ilya Shlyakhter's work include Formal Methods in Verification (4 papers), Logic, programming, and type systems (3 papers) and Genomics and Phylogenetic Studies (3 papers). Ilya Shlyakhter is often cited by papers focused on Formal Methods in Verification (4 papers), Logic, programming, and type systems (3 papers) and Genomics and Phylogenetic Studies (3 papers). Ilya Shlyakhter collaborates with scholars based in United States, Gambia and United Kingdom. Ilya Shlyakhter's co-authors include Eric S. Lander, Chad Nusbaum, Iain MacCallum, David B. Jaffe, Jonathan A. Butler, Michael Kleber, Matthew K. Belmonte, Manu Sridharan, Julie Dorsey and Seth Teller and has published in prestigious journals such as Cell, Bioinformatics and Genome Research.

In The Last Decade

Ilya Shlyakhter

18 papers receiving 1.4k citations

Hit Papers

1 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

ALLPATHS: De novo assembly of whole-genome shotgun microreads

2008 547 citations Jonathan A. Butler, Iain MacCallum et al. Genome Research profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Ilya Shlyakhter United States	14	689	291	291	228	174	19	1.5k
Paul Stodghill United States	22	226 0.3×	101 0.3×	415 1.4×	178 0.8×	84 0.5×	63	1.5k
Anne Denton United States	17	210 0.3×	111 0.4×	234 0.8×	144 0.6×	192 1.1×	65	966
Laxmi Parida United States	23	979 1.4×	275 0.9×	172 0.6×	422 1.9×	129 0.7×	142	2.3k
Gabriel Valiente Spain	19	809 1.2×	307 1.1×	111 0.4×	325 1.4×	116 0.7×	76	1.5k
Robert Giegerich Germany	33	4.3k 6.3×	542 1.9×	642 2.2×	650 2.9×	327 1.9×	113	5.7k
Chuan Yi Tang Taiwan	23	596 0.9×	146 0.5×	101 0.3×	249 1.1×	52 0.3×	145	1.7k
Bernard M. E. Moret United States	28	1.8k 2.6×	1.3k 4.6×	804 2.8×	578 2.5×	223 1.3×	109	3.0k
Gregory Butler Canada	16	409 0.6×	84 0.3×	187 0.6×	276 1.2×	85 0.5×	68	1.2k
Lihua Lü China	17	760 1.1×	313 1.1×	389 1.3×	203 0.9×	174 1.0×	59	1.9k
Patrik D’haeseleer United States	30	2.4k 3.5×	222 0.8×	230 0.8×	424 1.9×	333 1.9×	43	3.5k

Countries citing papers authored by Ilya Shlyakhter

Since Specialization

Citations

This map shows the geographic impact of Ilya Shlyakhter's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ilya Shlyakhter with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ilya Shlyakhter more than expected).

Fields of papers citing papers by Ilya Shlyakhter

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ilya Shlyakhter. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ilya Shlyakhter. The network helps show where Ilya Shlyakhter may publish in the future.

Co-authorship network of co-authors of Ilya Shlyakhter

This figure shows the co-authorship network connecting the top 25 collaborators of Ilya Shlyakhter. A scholar is included among the top collaborators of Ilya Shlyakhter based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Ilya Shlyakhter. Ilya Shlyakhter is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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19 of 19 papers shown

Battistella, Enzo, et al.. (2025). insilicoSV: a flexible grammar-based framework for structural variant simulation and placement. Bioinformatics. 41(11).

Park, Daniel, Simon Ye, Irwin Jungreis, et al.. (2018). broadinstitute/viral-ngs: v1.19.2. Zenodo (CERN European Organization for Nuclear Research). 1 indexed citations

Shlyakhter, Ilya, Pardis C. Sabeti, & S. F. Schaffner. (2014). Cosi2: an efficient simulator of exact and approximate coalescent with selection. Bioinformatics. 30(23). 3427–3429. 28 indexed citations

Grossman, Sharon R., Kristian G. Andersen, Ilya Shlyakhter, et al.. (2013). Identifying Recent Adaptations in Large-Scale Genomic Data. Cell. 152(4). 703–713. 228 indexed citations

Karlsson, Elinor K., Jason B. Harris, Shervin Tabrizi, et al.. (2013). Natural Selection in a Bangladeshi Population from the Cholera-Endemic Ganges River Delta. Science Translational Medicine. 5(192). 192ra86–192ra86. 65 indexed citations

MacCallum, Iain, Dariusz Przybylski, Sante Gnerre, et al.. (2009). ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads. Genome biology. 10(10). R103–R103. 114 indexed citations

Yang, Zijiang, Ilya Shlyakhter, Franjo Ivančić, et al.. (2008). Bitwidth Reduction via Symbolic Interval Analysis for Software Model Checking. IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems. 27(8). 1513–1517. 4 indexed citations

Butler, Jonathan A., Iain MacCallum, Michael Kleber, et al.. (2008). ALLPATHS: De novo assembly of whole-genome shotgun microreads. Genome Research. 18(5). 810–820. 547 indexed citations breakdown →

Sankaranarayanan, Sriram, Franjo Ivančić, Ilya Shlyakhter, & Aarti Gupta. (2006). Static analysis in disjunctive numerical domains. 3 indexed citations

10.

Shlyakhter, Ilya. (2006). Generating effective symmetry-breaking predicates for search problems. Discrete Applied Mathematics. 155(12). 1539–1548. 23 indexed citations

11.

Ivančić, Franjo, Ilya Shlyakhter, Aarti Gupta, et al.. (2006). Model checking C programs using F-Soft. 297–308. 48 indexed citations

12.

Shlyakhter, Ilya, et al.. (2004). Debugging overconstrained declarative models using unsatisfiable cores. 94–105. 40 indexed citations

13.

Shlyakhter, Ilya, et al.. (2002). Alcoa: the Alloy constraint analyzer. 21 indexed citations

14.

Shlyakhter, Ilya. (2001). Generating effective symmetry-breaking predicates for search problems. Electronic Notes in Discrete Mathematics. 9. 19–35. 26 indexed citations

15.

Jackson, Daniel, Ilya Shlyakhter, & Manu Sridharan. (2001). A micromodularity mechanism. 15 indexed citations

16.

Shlyakhter, Ilya, et al.. (2001). Reconstructing 3D tree models from instrumented photographs. IEEE Computer Graphics and Applications. 21(1). 53–61. 165 indexed citations

17.

Jackson, Daniel, Ilya Shlyakhter, & Manu Sridharan. (2001). A micromodularity mechanism. ACM SIGSOFT Software Engineering Notes. 26(5). 62–73. 13 indexed citations

18.

Jackson, Daniel, Ilya Shlyakhter, & Manu Sridharan. (2001). A micromodularity mechanism. 62–73. 89 indexed citations

19.

Gray, George M., Ping Li, Ilya Shlyakhter, & Richard E. Wilson. (1995). An Empirical Examination of Factors Influencing Prediction of Carcinogenic Hazard across Species. Regulatory Toxicology and Pharmacology. 22(3). 283–291. 25 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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