Haotian Cui

1.7k total citations · 4 hit papers
9 papers, 537 citations indexed

About

Haotian Cui is a scholar working on Molecular Biology, Biophysics and Cancer Research. According to data from OpenAlex, Haotian Cui has authored 9 papers receiving a total of 537 indexed citations (citations by other indexed papers that have themselves been cited), including 8 papers in Molecular Biology, 4 papers in Biophysics and 2 papers in Cancer Research. Recurrent topics in Haotian Cui's work include Single-cell and spatial transcriptomics (5 papers), Cell Image Analysis Techniques (4 papers) and Cancer Genomics and Diagnostics (2 papers). Haotian Cui is often cited by papers focused on Single-cell and spatial transcriptomics (5 papers), Cell Image Analysis Techniques (4 papers) and Cancer Genomics and Diagnostics (2 papers). Haotian Cui collaborates with scholars based in Canada, United States and Germany. Haotian Cui's co-authors include Bo Wang, Hassaan Maan, Xiaoming Wang, Kuan Pang, Nan Duan, Fabian J. Theis, Karin Hrovatin, Bowen Li, Shufen Xu and Rick Xing Ze Lu and has published in prestigious journals such as Nature, Nature Communications and Nature Reviews Genetics.

In The Last Decade

Haotian Cui

8 papers receiving 524 citations

Hit Papers

4 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

scGPT: toward building a foundation model for single-cell multi-omics using generative AI

2024 349 citations Haotian Cui, Xiaoming Wang et al. Nature Methods profile →
AGILE platform: a deep learning powered approach to accelerate LNP development for mRNA delivery

2024 91 citations Yue Xu, Shihao Ma et al. Nature Communications profile →
Transformers in single-cell omics: a review and new perspectives

2024 52 citations Karin Hrovatin, Haotian Cui et al. Nature Methods profile →
Towards multimodal foundation models in molecular cell biology

2025 22 citations Haotian Cui, Maria Brbić et al. Nature profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Haotian Cui Canada	5	400	82	59	43	37	9	537
Hassaan Maan Canada	7	314 0.8×	75 0.9×	52 0.9×	41 1.0×	33 0.9×	9	480
Kuan Pang Australia	4	273 0.7×	69 0.8×	46 0.8×	40 0.9×	22 0.6×	7	395
Bin Duan China	11	534 1.3×	42 0.5×	52 0.9×	40 0.9×	29 0.8×	19	631
Yungang Xu China	14	477 1.2×	37 0.5×	128 2.2×	48 1.1×	27 0.7×	29	638
Aditya Pratapa United States	6	476 1.2×	89 1.1×	30 0.5×	23 0.5×	34 0.9×	17	548
Mohsen Naghipourfar United States	3	360 0.9×	125 1.5×	62 1.1×	22 0.5×	16 0.4×	4	412
Shengquan Chen China	12	489 1.2×	74 0.9×	89 1.5×	46 1.1×	18 0.5×	49	578
Inbal Maayan Israel	6	224 0.6×	222 2.7×	31 0.5×	61 1.4×	62 1.7×	6	456
Hratch Baghdassarian United States	8	372 0.9×	54 0.7×	17 0.3×	11 0.3×	59 1.6×	13	452
Wanwen Zeng China	15	635 1.6×	55 0.7×	86 1.5×	39 0.9×	9 0.2×	24	712

Countries citing papers authored by Haotian Cui

Since Specialization

Citations

This map shows the geographic impact of Haotian Cui's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Haotian Cui with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Haotian Cui more than expected).

Fields of papers citing papers by Haotian Cui

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Haotian Cui. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Haotian Cui. The network helps show where Haotian Cui may publish in the future.

Co-authorship network of co-authors of Haotian Cui

This figure shows the co-authorship network connecting the top 25 collaborators of Haotian Cui. A scholar is included among the top collaborators of Haotian Cui based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Haotian Cui. Haotian Cui is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

9 of 9 papers shown

1.

Li, Gen, et al.. (2025). Harnessing artificial intelligence to advance CRISPR-based genome editing technologies. Nature Reviews Genetics. 27(3). 212–230.

2.

Ding, Sheng, Jin Li, Rui Luo, et al.. (2025). scGPT: end-to-end protocol for fine-tuned retinal cell type annotation. Nature Protocols. 21(3). 873–893. 1 indexed citations

3.

Cui, Haotian, Maria Brbić, Julio Sáez-Rodríguez, et al.. (2025). Towards multimodal foundation models in molecular cell biology. Nature. 640(8059). 623–633. 22 indexed citations breakdown →

4.

Hrovatin, Karin, et al.. (2024). Transformers in single-cell omics: a review and new perspectives. Nature Methods. 21(8). 1430–1443. 52 indexed citations breakdown →

5.

Cui, Haotian, Xiaoming Wang, Hassaan Maan, et al.. (2024). scGPT: toward building a foundation model for single-cell multi-omics using generative AI. Nature Methods. 21(8). 1470–1480. 349 indexed citations breakdown →

6.

Xu, Yue, Shihao Ma, Haotian Cui, et al.. (2024). AGILE platform: a deep learning powered approach to accelerate LNP development for mRNA delivery. Nature Communications. 15(1). 6305–6305. 91 indexed citations breakdown →

7.

Cui, Haotian, Hassaan Maan, Maria Vladoiu, et al.. (2024). DeepVelo: deep learning extends RNA velocity to multi-lineage systems with cell-specific kinetics. Genome biology. 25(1). 27–27. 19 indexed citations

8.

Cui, Haotian, Kimberly Perez, Andressa Dias Costa, et al.. (2024). Abstract A029: Evaluating and interpreting scGPT: A foundation model for single-cell biology in real-world cancer clinical trial data. Cancer Research. 84(17_Supplement_2). A029–A029. 1 indexed citations

9.

Cui, Haotian, et al.. (2019). Analysis of the complete genome sequence of a marine-derived strain Streptomyces sp. S063 CGMCC 14582 reveals its biosynthetic potential to produce novel anti-complement agents and peptides. PeerJ. 7. e6122–e6122. 2 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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