Eftychios A. Pnevmatikakis

6.7k total citations · 4 hit papers
39 papers, 3.1k citations indexed

About

Eftychios A. Pnevmatikakis is a scholar working on Cognitive Neuroscience, Cellular and Molecular Neuroscience and Biophysics. According to data from OpenAlex, Eftychios A. Pnevmatikakis has authored 39 papers receiving a total of 3.1k indexed citations (citations by other indexed papers that have themselves been cited), including 25 papers in Cognitive Neuroscience, 14 papers in Cellular and Molecular Neuroscience and 9 papers in Biophysics. Recurrent topics in Eftychios A. Pnevmatikakis's work include Neural dynamics and brain function (23 papers), Neuroscience and Neuropharmacology Research (9 papers) and Advanced Fluorescence Microscopy Techniques (9 papers). Eftychios A. Pnevmatikakis is often cited by papers focused on Neural dynamics and brain function (23 papers), Neuroscience and Neuropharmacology Research (9 papers) and Advanced Fluorescence Microscopy Techniques (9 papers). Eftychios A. Pnevmatikakis collaborates with scholars based in United States, France and United Kingdom. Eftychios A. Pnevmatikakis's co-authors include Andrea Giovannucci, Liam Paninski, Johannes Friedrich, Josh Merel, Pengcheng Zhou, Weijian Yang, Darcy S. Peterka, Randy M. Bruno, Farzaneh Najafi and Thomas M. Jessell and has published in prestigious journals such as Cell, Nature Communications and Neuron.

In The Last Decade

Eftychios A. Pnevmatikakis

38 papers receiving 3.0k citations

Hit Papers

4 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data

2016 608 citations Eftychios A. Pnevmatikakis, Daniel Soudry et al. Neuron profile →
NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data

2017 518 citations Eftychios A. Pnevmatikakis, Andrea Giovannucci profile →
CaImAn an open source tool for scalable calcium imaging data analysis

2019 461 citations Andrea Giovannucci, Johannes Friedrich et al. eLife profile →
Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data

2018 417 citations Pengcheng Zhou, Shanna L. Resendez et al. eLife profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Eftychios A. Pnevmatikakis United States	22	1.7k	1.6k	691	444	260	39	3.1k
Aaron Kerlin United States	10	1.4k 0.8×	1.6k 1.0×	653 0.9×	619 1.4×	145 0.6×	12	2.7k
Pengcheng Zhou China	22	1.3k 0.8×	1.2k 0.8×	327 0.5×	431 1.0×	119 0.5×	60	2.9k
Jason N. D. Kerr Germany	23	2.1k 1.2×	2.6k 1.6×	858 1.2×	941 2.1×	146 0.6×	38	4.0k
Benjamin F. Grewe Switzerland	22	1.5k 0.9×	1.8k 1.1×	636 0.9×	504 1.1×	91 0.3×	38	3.2k
Forrest Collman United States	10	1.1k 0.6×	1.1k 0.7×	498 0.7×	398 0.9×	108 0.4×	14	2.0k
Randy M. Bruno United States	31	3.7k 2.2×	3.4k 2.1×	641 0.9×	530 1.2×	192 0.7×	49	4.9k
Hod Dana United States	14	846 0.5×	1.7k 1.1×	790 1.1×	961 2.2×	129 0.5×	28	3.0k
Samuel Andrew Hires United States	17	1.6k 0.9×	2.8k 1.7×	781 1.1×	1.9k 4.2×	238 0.9×	25	4.7k
Wei-Chung Allen Lee United States	21	1.1k 0.6×	1.6k 1.0×	624 0.9×	753 1.7×	107 0.4×	48	3.3k
Mark L. Andermann United States	37	3.5k 2.0×	2.7k 1.7×	413 0.6×	1.0k 2.3×	353 1.4×	61	6.3k

Countries citing papers authored by Eftychios A. Pnevmatikakis

Since Specialization

Citations

This map shows the geographic impact of Eftychios A. Pnevmatikakis's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Eftychios A. Pnevmatikakis with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Eftychios A. Pnevmatikakis more than expected).

Fields of papers citing papers by Eftychios A. Pnevmatikakis

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Eftychios A. Pnevmatikakis. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Eftychios A. Pnevmatikakis. The network helps show where Eftychios A. Pnevmatikakis may publish in the future.

Co-authorship network of co-authors of Eftychios A. Pnevmatikakis

This figure shows the co-authorship network connecting the top 25 collaborators of Eftychios A. Pnevmatikakis. A scholar is included among the top collaborators of Eftychios A. Pnevmatikakis based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Eftychios A. Pnevmatikakis. Eftychios A. Pnevmatikakis is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Nikitchenko, Maxim, Chaichontat Sriworarat, Eftychios A. Pnevmatikakis, et al.. (2025). A software platform for real-time and adaptive neuroscience experiments. Nature Communications. 16(1). 9909–9909.

Friedrich, Johannes, et al.. (2023). FIOLA: an accelerated pipeline for fluorescence imaging online analysis. Nature Methods. 20(9). 1417–1425. 5 indexed citations

Friedrich, Johannes, et al.. (2021). VolPy: Automated and scalable analysis pipelines for voltage imaging datasets. PLoS Computational Biology. 17(4). e1008806–e1008806. 24 indexed citations

Friedrich, Johannes, Andrea Giovannucci, & Eftychios A. Pnevmatikakis. (2021). Online analysis of microendoscopic 1-photon calcium imaging data streams. PLoS Computational Biology. 17(1). e1008565–e1008565. 22 indexed citations

Taxidis, Jiannis, et al.. (2020). Differential Emergence and Stability of Sensory and Temporal Representations in Context-Specific Hippocampal Sequences. Neuron. 108(5). 984–998.e9. 57 indexed citations

Giovannucci, Andrea, Johannes Friedrich, Pat Gunn, et al.. (2019). CaImAn an open source tool for scalable calcium imaging data analysis. eLife. 8. 461 indexed citations breakdown →

Pnevmatikakis, Eftychios A.. (2019). Analysis pipelines for calcium imaging data. Current Opinion in Neurobiology. 55. 15–21. 54 indexed citations

Najafi, Farzaneh, Gamaleldin F. Elsayed, Eftychios A. Pnevmatikakis, et al.. (2019). Excitatory and Inhibitory Subnetworks Are Equally Selective during Decision-Making and Emerge Simultaneously during Learning. Neuron. 105(1). 165–179.e8. 65 indexed citations

Zhou, Pengcheng, Shanna L. Resendez, Jose Rodríguez-Romaguera, et al.. (2018). Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data. eLife. 7. 417 indexed citations breakdown →

10.

Giovannucci, Andrea, Johannes Friedrich, Anne K. Churchland, et al.. (2017). OnACID: Online Analysis of Calcium Imaging Data in Real Time. Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory). 30. 2381–2391. 4 indexed citations

11.

Picardo, Michel A., Josh Merel, Kalman A. Katlowitz, et al.. (2016). Population-Level Representation of a Temporal Sequence Underlying Song Production in the Zebra Finch. Neuron. 90(4). 866–876. 78 indexed citations

12.

Pnevmatikakis, Eftychios A., Daniel Soudry, Yuanjun Gao, et al.. (2016). Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data. Neuron. 89(2). 285–299. 608 indexed citations breakdown →

13.

Machado, Timothy A., Eftychios A. Pnevmatikakis, Liam Paninski, Thomas M. Jessell, & Andrew Miri. (2015). Primacy of Flexor Locomotor Pattern Revealed by Ancestral Reversion of Motor Neuron Identity. Cell. 162(2). 338–350. 53 indexed citations

14.

Michailidis, Ioannis E., Wei Kevin Zhang, Bochao Lin, et al.. (2014). Age-Related Homeostatic Midchannel Proteolysis of Neuronal L-type Voltage-Gated Ca2+ Channels. Neuron. 82(5). 1045–1057. 23 indexed citations

15.

Ramirez, Alejandro, Eftychios A. Pnevmatikakis, Josh Merel, et al.. (2014). Spatiotemporal receptive fields of barrel cortex revealed by reverse correlation of synaptic input. Nature Neuroscience. 17(6). 866–875. 54 indexed citations

16.

Pnevmatikakis, Eftychios A. & Liam Paninski. (2013). Sparse nonnegative deconvolution for compressive calcium imaging: algorithms and phase transitions. Neural Information Processing Systems. 26. 1250–1258. 24 indexed citations

17.

Pfau, David, Eftychios A. Pnevmatikakis, & Liam Paninski. (2013). Robust learning of low-dimensional dynamics from large neural ensembles. Neural Information Processing Systems. 26. 2391–2399. 27 indexed citations

18.

Pnevmatikakis, Eftychios A. & Liam Paninski. (2012). Fast interior-point inference in high-dimensional sparse, penalized state-space models. International Conference on Artificial Intelligence and Statistics. 895–904. 4 indexed citations

19.

Lazar, Aurel A., Eftychios A. Pnevmatikakis, & Yiyin Zhou. (2010). Encoding natural scenes with neural circuits with random thresholds. Vision Research. 50(22). 2200–2212. 20 indexed citations

20.

Lazar, Aurel A. & Eftychios A. Pnevmatikakis. (2008). A video Time Encoding Machine. 717–720. 6 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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