Edward M. Marcotte

39.3k total citations · 9 hit papers
236 papers, 23.6k citations indexed

About

Edward M. Marcotte is a scholar working on Molecular Biology, Spectroscopy and Genetics. According to data from OpenAlex, Edward M. Marcotte has authored 236 papers receiving a total of 23.6k indexed citations (citations by other indexed papers that have themselves been cited), including 203 papers in Molecular Biology, 38 papers in Spectroscopy and 37 papers in Genetics. Recurrent topics in Edward M. Marcotte's work include Bioinformatics and Genomic Networks (67 papers), RNA and protein synthesis mechanisms (40 papers) and Advanced Proteomics Techniques and Applications (33 papers). Edward M. Marcotte is often cited by papers focused on Bioinformatics and Genomic Networks (67 papers), RNA and protein synthesis mechanisms (40 papers) and Advanced Proteomics Techniques and Applications (33 papers). Edward M. Marcotte collaborates with scholars based in United States, South Korea and Canada. Edward M. Marcotte's co-authors include Christine Vogel, David Eisenberg, Todd O. Yeates, Insuk Lee, Matteo Pellegrini, Michael J. Thompson, Arun Ramani, Luiz O. F. Penalva, Raquel de Sousa Abreu and Shailesh V. Date and has published in prestigious journals such as Nature, Science and Cell.

In The Last Decade

Edward M. Marcotte

229 papers receiving 23.0k citations

Hit Papers

Insights into the regulation of protein abu... 1999 2026 2008 2017 2012 1999 1999 2009 2006 500 1000 1.5k 2.0k 2.5k
What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

  1. Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
    2012 2.9k citations Edward M. Marcotte et al. profile →
  2. Detecting Protein Function and Protein-Protein Interactions from Genome Sequences
    1999 1.3k citations Edward M. Marcotte, David Eisenberg et al. Science profile →
  3. Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
    1999 1.2k citations Edward M. Marcotte, David Eisenberg et al. Proceedings of the National Academy of Sciences profile →
  4. Global signatures of protein and mRNA expression levels
    2009 964 citations Edward M. Marcotte et al. profile →
  5. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
    2006 910 citations Edward M. Marcotte et al. profile →
  6. A combined algorithm for genome-wide prediction of protein function
    1999 706 citations Edward M. Marcotte, David Eisenberg et al. profile →
  7. Protein function in the post-genomic era
    2000 536 citations David Eisenberg, Edward M. Marcotte et al. profile →
  8. A Probabilistic Functional Network of Yeast Genes
    2004 503 citations Edward M. Marcotte et al. Science profile →
  9. Prioritizing candidate disease genes by network-based boosting of genome-wide association data
    2011 498 citations Edward M. Marcotte et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Edward M. Marcotte United States 71 18.8k 3.2k 1.9k 1.7k 1.3k 236 23.6k
S.K. Burley United States 86 23.1k 1.2× 3.3k 1.0× 1.4k 0.7× 1.6k 0.9× 1.6k 1.2× 333 33.0k
Andrew Emili Canada 66 16.3k 0.9× 2.2k 0.7× 2.1k 1.1× 1.1k 0.6× 1.6k 1.2× 257 21.9k
Burkhard Rost United States 79 24.1k 1.3× 3.0k 0.9× 1.1k 0.6× 1.7k 1.0× 1.3k 1.0× 280 28.9k
Rolf Apweiler United Kingdom 48 19.0k 1.0× 2.8k 0.9× 2.8k 1.4× 3.8k 2.2× 1.2k 0.9× 167 25.7k
Luís Serrano Spain 76 19.6k 1.0× 2.6k 0.8× 1.4k 0.7× 788 0.5× 2.5k 1.9× 314 23.5k
Stanley Fields United States 76 27.8k 1.5× 3.2k 1.0× 1.4k 0.7× 2.9k 1.7× 3.9k 2.9× 186 33.5k
Paul D. Thomas United States 39 13.7k 0.7× 3.4k 1.0× 947 0.5× 1.9k 1.1× 1.3k 1.0× 74 21.0k
Steven E. Brenner United States 49 19.2k 1.0× 2.7k 0.8× 699 0.4× 2.6k 1.5× 874 0.7× 141 23.7k
Gert Vriend Netherlands 63 15.3k 0.8× 1.8k 0.5× 994 0.5× 1.1k 0.7× 1.0k 0.8× 192 21.0k
A. Keith Dunker United States 75 22.6k 1.2× 1.9k 0.6× 2.0k 1.0× 1.6k 0.9× 2.8k 2.1× 163 26.8k

Countries citing papers authored by Edward M. Marcotte

Since Specialization
Citations

This map shows the geographic impact of Edward M. Marcotte's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Edward M. Marcotte with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Edward M. Marcotte more than expected).

Fields of papers citing papers by Edward M. Marcotte

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Edward M. Marcotte. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Edward M. Marcotte. The network helps show where Edward M. Marcotte may publish in the future.

Co-authorship network of co-authors of Edward M. Marcotte

This figure shows the co-authorship network connecting the top 25 collaborators of Edward M. Marcotte. A scholar is included among the top collaborators of Edward M. Marcotte based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Edward M. Marcotte. Edward M. Marcotte is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Wilke, Claus O., et al.. (2024). Mining patents with large language models elucidates the chemical function landscape. Digital Discovery. 3(6). 1150–1159. 4 indexed citations
2.
McCafferty, Caitlyn L, Babak Nami, Corbin Black, et al.. (2023). Integrated modeling of the Nexin-dynein regulatory complex reveals its regulatory mechanism. Nature Communications. 14(1). 5741–5741. 21 indexed citations
3.
June, Viviana, Dongqing Xu, Ophelia Papoulas, et al.. (2023). Protein nonadditive expression and solubility contribute to heterosis in Arabidopsis hybrids and allotetraploids. Frontiers in Plant Science. 14. 1252564–1252564.
4.
McCafferty, Caitlyn L, et al.. (2023). Does AlphaFold2 model proteins’ intracellular conformations? An experimental test using cross-linking mass spectrometry of endogenous ciliary proteins. Communications Biology. 6(1). 421–421. 21 indexed citations
5.
McCafferty, Caitlyn L, Pierre C. Havugimana, Ophelia Papoulas, et al.. (2022). The protein organization of a red blood cell. Cell Reports. 40(3). 111103–111103. 40 indexed citations
6.
Lee, Chanjae, Ophelia Papoulas, José Alvarado, et al.. (2021). Twinfilin1 controls lamellipodial protrusive activity and actin turnover during vertebrate gastrulation. Journal of Cell Science. 134(14). 8 indexed citations
7.
Zhang, Le, James P. Mapes, Jagannath Swaminathan, et al.. (2021). Photoredox-Catalyzed Decarboxylative C -Terminal Differentiation for Bulk- and Single-Molecule Proteomics. ACS Chemical Biology. 16(11). 2595–2603. 13 indexed citations
8.
Laurent, Jon M., et al.. (2020). Systematic Humanization of the Yeast Cytoskeleton Discerns Functionally Replaceable from Divergent Human Genes. Genetics. 215(4). 1153–1169. 16 indexed citations
9.
Liebeskind, Benjamin J., Richard W. Aldrich, & Edward M. Marcotte. (2019). Ancestral reconstruction of protein interaction networks. PLoS Computational Biology. 15(10). e1007396–e1007396. 9 indexed citations
10.
Boulgakov, Alexander A., Andrew D. Ellington, & Edward M. Marcotte. (2019). Bringing Microscopy-By-Sequencing into View. Trends in biotechnology. 38(2). 154–162. 7 indexed citations
11.
Tu, Fan, Jakub Sedzinski, Yun Ma, Edward M. Marcotte, & John B. Wallingford. (2018). Protein localization screening in vivo reveals novel regulators of multiciliated cell development and function. Journal of Cell Science. 131(3). 25 indexed citations
12.
Young, Jonathan H. & Edward M. Marcotte. (2017). Predictability of Genetic Interactions from Functional Gene Modules. G3 Genes Genomes Genetics. 7(2). 617–624. 8 indexed citations
13.
Drew, Kevin, Christian L. Müller, Richard Bonneau, & Edward M. Marcotte. (2017). Identifying direct contacts between protein complex subunits from their conditional dependence in proteomics datasets. PLoS Computational Biology. 13(10). e1005625–e1005625. 18 indexed citations
14.
Kachroo, Aashiq H., Jon M. Laurent, Christopher M. Yellman, et al.. (2015). Systematic humanization of yeast genes reveals conserved functions and genetic modularity. Science. 348(6237). 921–925. 287 indexed citations
15.
Rod, Naja Hulvej, Yvette Bordelon, Alexander Thompson, Edward M. Marcotte, & Beate Ritz. (2012). Major life events and development of major depression in Parkinson's disease patients. European Journal of Neurology. 20(4). 663–670. 24 indexed citations
16.
Huse, Holly, Taejoon Kwon, James E. A. Zlosnik, et al.. (2010). Parallel Evolution in Pseudomonas aeruginosa over 39,000 Generations In Vivo. mBio. 1(4). 99 indexed citations
17.
McGary, Kriston L., Tae Joo Park, John O. Woods, et al.. (2010). Systematic discovery of nonobvious human disease models through orthologous phenotypes. Proceedings of the National Academy of Sciences. 107(14). 6544–6549. 203 indexed citations
18.
Narayanaswamy, Rammohan, Matthew Levy, Mark Tsechansky, et al.. (2009). Widespread reorganization of metabolic enzymes into reversible assemblies upon nutrient starvation. Proceedings of the National Academy of Sciences. 106(25). 10147–10152. 303 indexed citations
19.
Kim, Wankyu, Chase Krumpelman, & Edward M. Marcotte. (2008). Inferring mouse gene functions from genomic-scale data using a combined functional network/classification strategy. Genome biology. 9(S1). S5–S5. 60 indexed citations
20.
Marcotte, Edward M., Ioannis Xénarios, Alexander M. van der Bliek, & David Eisenberg. (2000). Localizing proteins in the cell from their phylogenetic profiles. Proceedings of the National Academy of Sciences. 97(22). 12115–12120. 174 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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