Damien J. Downes

3.0k citations

38 papers · 1.3k indexed · h-index 20

Co-authors: Jim R. Hughes A. Marieke Oudelaar Douglas R. Higgs Jelena Telenius Ron Schweßinger James Davies Matthew Gosden Lars L. P. Hanssen
Topics: Genomics and Chromatin Dynamics (24 papers)RNA Research and Splicing (14 papers)RNA and protein synthesis mechanisms (10 papers)
Cited by: Molecular Biology Cancer Research Plant Science
Journals: Nature Nucleic Acids Research Nature Communications
Partner nations: United Kingdom United States Germany

In The Last Decade

Damien J. Downes

38 papers receiving 1.3k citations

Peers

Countries citing papers authored by Damien J. Downes

Since Specialization

Citations

This map shows the geographic impact of Damien J. Downes's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Damien J. Downes with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Damien J. Downes more than expected).

Fields of papers citing papers by Damien J. Downes

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Damien J. Downes. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Damien J. Downes. The network helps show where Damien J. Downes may publish in the future.

Co-authorship network of co-authors of Damien J. Downes

This figure shows the co-authorship network connecting the top 25 collaborators of Damien J. Downes. A scholar is included among the top collaborators of Damien J. Downes based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Damien J. Downes. Damien J. Downes is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Determining chromatin architecture with Micro Capture-C 2023 ·Nature Protocols ·(unknown),(unknown),Nicholas Denny,Damien J. Downes,James Davies	25
2	LanceOtron: a deep learning peak caller for genome sequencing experiments 2022 ·Bioinformatics ·(unknown),Martin J. Sergeant,Christopher B. Cole,Damien J. Downes,Jim R. Hughes,Stephen Taylor	23
3	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development 2022 ·Nature Communications ·Dominic D. G. Owens,Giorgio Anselmi,A. Marieke Oudelaar,Damien J. Downes,(unknown),Joe Harman,Ron Schweßinger,(unknown),Lucas Greder,Sara De Ornellas,Danuta M. Jeziorska,Jelena Telenius,Jim R. Hughes,Marella de Bruijn	18
4	Assessment of Multiway Interactions with Tri-C 2022 ·Methods in molecular biology ·A. Marieke Oudelaar,Damien J. Downes,Jim R. Hughes	4
5	The chromatin remodeller ATRX facilitates diverse nuclear processes, in a stochastic manner, in both heterochromatin and euchromatin 2022 ·Nature Communications ·(unknown),Damien J. Downes,Caroline Scott,(unknown),Jelena Telenius,Emmanouela Repapi,Ron Schweßinger,Matthew Gosden,Jill M. Brown,Stephen Taylor,Pak Leng Cheong,Jim R. Hughes,Douglas R. Higgs,Richard J. Gibbons	29
6	Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture 2022 ·Nature Protocols ·Damien J. Downes,(unknown),Magdalena A. Karpińska,Taras Velychko,Kévin Rue-Albrecht,David Sims,Thomas A. Milne,James Davies,A. Marieke Oudelaar,Jim R. Hughes	25
7	Highly efficient CRISPR-Cas9-mediated editing identifies novel mechanosensitive microRNA-140 targets in primary human articular chondrocytes 2022 ·Osteoarthritis and Cartilage ·(unknown),(unknown),Christine Seidl,Damien J. Downes,David A. Young,(unknown),Linyi Zhu,Tonia L. Vincent	11
8	Duplication and Functional Divergence of Branched-Chain Amino Acid Biosynthesis Genes in Aspergillus nidulans 2021 ·mBio ·(unknown),Damien J. Downes,(unknown),(unknown),Richard B. Todd	11
9	Enhancers predominantly regulate gene expression during differentiation via transcription initiation 2021 ·Molecular Cell ·(unknown),Ron Schweßinger,Takayuki Nojima,Jelena Telenius,Robert A. Beagrie,Damien J. Downes,A. Marieke Oudelaar,(unknown),Bryony Graham,M. A. Bender,Nicholas Proudfoot,Douglas R. Higgs,Jim R. Hughes	29
10	Multi Locus View: an extensible web-based tool for the analysis of genomic data. 2021 ·Communications Biology ·Martin J. Sergeant,Jim R. Hughes,(unknown),Gerton Lunter,Damien J. Downes,Stephen Taylor	4
11	Defining genome architecture at base-pair resolution 2021 ·Nature ·Hua Peng,Mohsin Badat,Lars L. P. Hanssen,(unknown),Nicholas T. Crump,Damien J. Downes,Danuta M. Jeziorska,A. Marieke Oudelaar,Ron Schweßinger,Stephen Taylor,Thomas A. Milne,Jim R. Hughes,Douglas R. Higgs,James Davies	103
12	Absolute Quantification of Transcription Factors Reveals Principles of Gene Regulation in Erythropoiesis 2020 ·Molecular Cell ·Mark A. Gillespie,Carmen G. Palii,Daniel Sánchez‐Taltavull,Paul Shannon,William J.R. Longabaugh,Damien J. Downes,(unknown),Herbert M. Espinoza,Jim R. Hughes,Nathan D. Price,Theodore J. Perkins,Jeffrey A. Ranish,Marjorie Brand	82
13	DeepC: predicting 3D genome folding using megabase-scale transfer learning 2020 ·Nature Methods ·Ron Schweßinger,Matthew Gosden,Damien J. Downes,Richard C. Brown,A. Marieke Oudelaar,Jelena Telenius,Yee Whye Teh,Gerton Lunter,Jim R. Hughes	111
14	DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation 2019 ·Nature Communications ·Laura Godfrey,Nicholas T. Crump,Ross Thorne,I‐Jun Lau,Emmanouela Repapi,(unknown),(unknown),Joe Harman,Jelena Telenius,A. Marieke Oudelaar,Damien J. Downes,Paresh Vyas,Jim R. Hughes,Thomas A. Milne	93
15	Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains 2018 ·Nature Genetics ·A. Marieke Oudelaar,James Davies,Lars L. P. Hanssen,Jelena Telenius,Ron Schweßinger,Yu Liu,Jill M. Brown,Damien J. Downes,Andrea M. Chiariello,Simona Bianco,Mario Nicodemi,Veronica J. Buckle,Job Dekker,Douglas R. Higgs,Jim R. Hughes	134
16	High-Throughput Genotyping of CRISPR/Cas Edited Cells in 96-Well Plates 2018 ·Methods and Protocols ·Lea Nußbaum,Jelena Telenius,(unknown),(unknown),Maria Suciu,Damien J. Downes,Jim R. Hughes	3
17	Tissue-specific CTCF–cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo 2017 ·Nature Cell Biology ·Lars L. P. Hanssen,Mira Kassouf,A. Marieke Oudelaar,Daniel Biggs,Chris Preece,Damien J. Downes,Matthew Gosden,Jacqueline A. Sharpe,Jacqueline A. Sloane-Stanley,Jim R. Hughes,Benjamin Davies,Douglas R. Higgs	150
18	Robust detection of chromosomal interactions from small numbers of cells using low-input Capture-C 2017 ·Nucleic Acids Research ·A. Marieke Oudelaar,James Davies,Damien J. Downes,Douglas R. Higgs,Jim R. Hughes	19
19	Spatial differentiation of gene expression in Aspergillus niger colony grown for sugar beet pulp utilization 2015 ·Scientific Reports ·Isabelle Benoit,Miaomiao Zhou,(unknown),Damien J. Downes,Richard B. Todd,Wendy Kloezen,Harm Post,Albert J. R. Heck,Maarten Altelaar,Ronald P. de Vries	16
20	Dual DNA binding and coactivator functions of A spergillus nidulans TamA , a Z n( II )2 Cys 6 transcription factor 2014 ·Molecular Microbiology ·Damien J. Downes,Meryl A. Davis,Koon Ho Wong,(unknown),Michael J. Hynes,Richard B. Todd	16

About Damien J. Downes

Damien J. Downes is a scholar working on Business and International Management, Molecular Biology and Plant Science, having authored 38 papers that have together received 1.3k indexed citations. Recurring topics across this work include Genomics and Chromatin Dynamics (24 papers), RNA Research and Splicing (14 papers) and RNA and protein synthesis mechanisms (10 papers). The work is most often cited by research in Molecular Biology (1.1k citations), Cancer Research (112 citations) and Plant Science (253 citations). Damien J. Downes has collaborated with scholars based in United Kingdom, United States and Germany. Frequent co-authors include Jim R. Hughes, A. Marieke Oudelaar, Douglas R. Higgs, Jelena Telenius, Ron Schweßinger, James Davies, Matthew Gosden, Lars L. P. Hanssen, Richard B. Todd and Thomas A. Milne. Their work appears in journals such as Nature, Nucleic Acids Research and Nature Communications.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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