Barbara Treutlein

13.4k citations

73 papers · 7.4k indexed · 9 hit papers · h-index 39

Molecular Biology top 1%
Biomedical Engineering top 5%
Cancer Research top 2%
Pulmonary and Respiratory Medicine top 5%
Surgery top 5%

Co-authors: J. Gray Camp Stephen R. Quake Norma Neff Gary L. Mantalas Angela Ruohao Wu Douglas Brownfield Sabina Kanton Tobias Gerber
Topics: Single-cell and spatial transcriptomics (39 papers)Pluripotent Stem Cells Research (19 papers)CRISPR and Genetic Engineering (11 papers)
Cited by: Developmental Neuroscience Molecular Biology Biophysics
Journals: Nature Science Cell
Partner nations: Germany Switzerland United States

In The Last Decade

Barbara Treutlein

70 papers receiving 7.4k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq

2014 934 citations Barbara Treutlein, Norma Neff et al. Nature profile →
Human cerebral organoids recapitulate gene expression programs of fetal neocortex development

2015 767 citations J. Gray Camp, Marta Florio et al. Proceedings of the National Academy of Sciences profile →
Quantitative assessment of single-cell RNA-sequencing methods

2013 535 citations Norma Neff, Barbara Treutlein et al. profile →
Lineage-negative progenitors mobilize to regenerate lung epithelium after major injury

2014 455 citations Barbara Treutlein et al. Nature profile →
Organoid single-cell genomic atlas uncovers human-specific features of brain development

2019 445 citations Sabina Kanton, Zhisong He et al. Nature profile →
Multilineage communication regulates human liver bud development from pluripotency

2017 424 citations J. Gray Camp, Keisuke Sekine et al. Nature profile →
A nomenclature consensus for nervous system organoids and assembloids

2022 171 citations Sergiu P. Pașca, Paola Arlotta et al. Nature profile →
Inferring and perturbing cell fate regulomes in human brain organoids

2022 145 citations Jonas Simon Fleck, Sophie Jansen et al. Nature profile →
Single-cell brain organoid screening identifies developmental defects in autism

2023 122 citations Chong Li, Jonas Simon Fleck et al. Nature profile →

Peers

Countries citing papers authored by Barbara Treutlein

Since Specialization

Citations

This map shows the geographic impact of Barbara Treutlein's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Barbara Treutlein with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Barbara Treutlein more than expected).

Fields of papers citing papers by Barbara Treutlein

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Barbara Treutlein. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Barbara Treutlein. The network helps show where Barbara Treutlein may publish in the future.

Co-authorship network of co-authors of Barbara Treutlein

This figure shows the co-authorship network connecting the top 25 collaborators of Barbara Treutlein. A scholar is included among the top collaborators of Barbara Treutlein based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Barbara Treutlein. Barbara Treutlein is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Morphodynamics of human early brain organoid development 2025 ·Nature ·Akanksha Jain,(unknown),Fátima Sanchís-Calleja,(unknown),Zhisong He,(unknown),Fides Zenk,Antonius Chrisnandy,(unknown),(unknown),Ryoko Okamoto,Małgorzata Santel,Makiko Seimiya,René Holtackers,(unknown),Sophie Jansen,Matthias P. Lütolf,J. Gray Camp,Barbara Treutlein	8
2	Macro-scale, scaffold-assisted model of the human bone marrow endosteal niche using hiPSC-vascularized osteoblastic organoids 2025 ·Cell stem cell ·Qing Li,Marina Nikolova,Gangyu Zhang,Igor Červenka,(unknown),Dominik Bürri,(unknown),(unknown),(unknown),Juerg Schwaller,Barbara Treutlein,Iván Martín,Andrés García‐García	0
3	Cell atlas of the regenerating human liver after portal vein embolization 2024 ·Nature Communications ·Agnieska Brazovskaja,Tomás Gomes,René Holtackers,Philipp Wahle,Christiane Körner,Zhisong He,(unknown),(unknown),(unknown),Małgorzata Santel,Makiko Seimiya,Timm Denecke,Michael Dannemann,Mario Brosch,Jochen Hampe,Daniel Seehofer,Georg Damm,J. Gray Camp,Barbara Treutlein	5
4	Single-cell brain organoid screening identifies developmental defects in autismbreakdown → 2023 ·Nature ·Chong Li,Jonas Simon Fleck,(unknown),Thomas R. Burkard,(unknown),Marlene Stuempflen,Angela Maria Peer,Ábel Vértesy,Jamie B. Littleboy,Christopher Esk,Ulrich Elling,Gregor Kasprian,Nina S. Corsini,Barbara Treutlein,Juergen A. Knoblich	122
5	Multi-modal spatiotemporal phenotyping of human retinal organoid development 2023 ·Zenodo (CERN European Organization for Nuclear Research) ·Philipp Wahle,Giovanna Brancati,(unknown),Zhisong He,Lucas Pelkmans,Barbara Treutlein,J. Gray Camp	1
6	Metformin rescues migratory deficits of cells derived from patients with periventricular heterotopia 2023 ·EMBO Molecular Medicine ·(unknown),(unknown),Marina Snapyan,(unknown),Francesco Di Matteo,Stephen P. Robertson,Barbara Treutlein,Martin Parent,Silvia Cappello,Armen Saghatelyan	1
7	Characterization of RNA content in individual phase-separated coacervate microdroplets 2022 ·Nature Communications ·Damian Wollny,Benjamin Vernot,Jie Wang,Maria Hondele,(unknown),Franziska Aron,(unknown),Zhisong He,Anthony A. Hyman,Karsten Weis,J. Gray Camp,T.‐Y. Dora Tang,Barbara Treutlein	20
8	A nomenclature consensus for nervous system organoids and assembloidsbreakdown → 2022 ·Nature ·Sergiu P. Pașca,Paola Arlotta,Helen S. Bateup,J. Gray Camp,Silvia Cappello,Fred H. Gage,Juergen A. Knoblich,Arnold R. Kriegstein,Madeline A. Lancaster,Guo‐li Ming,Alysson R. Muotri,In‐Hyun Park,Orly Reiner,Hongjun Song,Lorenz Studer,Sally Temple,Giuseppe Testa,Barbara Treutlein,Flora M. Vaccarino	171
9	Inferring and perturbing cell fate regulomes in human brain organoidsbreakdown → 2022 ·Nature ·Jonas Simon Fleck,Sophie Jansen,Damian Wollny,Fides Zenk,Makiko Seimiya,Akanksha Jain,Ryoko Okamoto,Małgorzata Santel,Zhisong He,J. Gray Camp,Barbara Treutlein	145
10	High-throughput muscle fiber typing from RNA sequencing data 2022 ·Skeletal Muscle ·Nikolay Oskolkov,Małgorzata Santel,Hemang Parikh,(unknown),(unknown),Eri Miyamoto‐Mikami,Kristoffer Ström,(unknown),Dmytro Kryvokhyzha,Mikko Lehtovirta,Hiroyuki Kobayashi,Ryo Kakigi,Hisashi Naıto,Karl‐Fredrik Eriksson,Björn Nystedt,Noriyuki Fuku,Barbara Treutlein,Svante Pääbo,Ola Hansson	6
11	Engineering of fully humanized and vascularized 3D bone marrow niches sustaining undifferentiated human cord blood hematopoietic stem and progenitor cells 2021 ·Journal of Tissue Engineering ·Gordian Born,Marina Nikolova,Arnaud Scherberich,Barbara Treutlein,Andrés García‐García,Iván Martín	13
12	Single-cell-resolution transcriptome map of human, chimpanzee, bonobo, and macaque brains 2020 ·Genome Research ·Ekaterina E. Khrameeva,Ilia Kurochkin,Dingding Han,Patricia Guijarro,Sabina Kanton,Małgorzata Santel,(unknown),(unknown),Pavel Mazin,Marat Sabirov,(unknown),Olga Efimova,Anna Tkachev,Song Guo,Chet C. Sherwood,J. Gray Camp,Svante Pääbo,Barbara Treutlein,Philipp Khaitovich	82
13	Reconstructing complex lineage trees from scRNA-seq data using MERLoT 2019 ·Nucleic Acids Research ·R. Gonzalo Parra,Νικόλαος Παπαδόπουλος,(unknown),(unknown),(unknown),(unknown),Barbara Treutlein,Johannes Soeding	12
14	Single-cell analysis uncovers convergence of cell identities during axolotl limb regeneration 2018 ·Science ·Tobias Gerber,Prayag Murawala,Dunja Knapp,Wouter Masselink,Maritta Schuez,Sarah Hermann,(unknown),Sergej Nowoshilow,Jorge Kageyama,Shahryar Khattak,Joshua D. Currie,J. Gray Camp,Elly M. Tanaka,Barbara Treutlein	259
15	A novel population of Hopx-dependent basal radial glial cells in the developing mouse neocortex 2018 ·Development ·Samir Vaid,J. Gray Camp,Lena Hersemann,Christina Eugster Oegema,Anne‐Kristin Heninger,Sylke Winkler,Holger Brandl,Mihail Sarov,Barbara Treutlein,Wieland Β. Huttner,Takashi Namba	66
16	Defining human cardiac transcription factor hierarchies using integrated single-cell heterogeneity analysis 2018 ·Nature Communications ·Jared M. Churko,Priyanka Garg,Barbara Treutlein,Meenakshi Venkatasubramanian,Haodi Wu,Jaecheol Lee,(unknown),(unknown),(unknown),Kashish Chetal,Gary L. Mantalas,Norma Neff,Eric Jabart,Arun Sharma,Garry P. Nolan,Nathan Salomonis,Joseph C. Wu	137
17	Optimal Hypoxia Regulates Human iPSC-Derived Liver Bud Differentiation through Intercellular TGFB Signaling 2018 ·Stem Cell Reports ·Hiroaki Ayabe,Takahisa Anada,(unknown),(unknown),Masaki Kimura,Emi Yoshizawa,(unknown),Yasuharu Ueno,Keisuke Sekine,J. Gray Camp,Barbara Treutlein,Autumn Ferguson,Osamu Suzuki,Takanori Takebe,Hideki Taniguchi	39
18	Rapid Chromatin Switch in the Direct Reprogramming of Fibroblasts to Neurons 2017 ·Cell Reports ·Orly L. Wapinski,Qian Yi Lee,Albert C. Chen,Rui Li,M. Ryan Corces,Cheen Euong Ang,Barbara Treutlein,Chaomei Xiang,Valérie Baubet,Fabian P. Suchy,Venkat Sankar,Sopheak Sim,Stephen R. Quake,Nadia Dahmane,Marius Wernig,Howard Y. Chang	95
19	Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq 2016 ·Nature ·Barbara Treutlein,Qian Yi Lee,J. Gray Camp,Moritz Mall,Winston Koh,S. Ali M. Shariati,Sopheak Sim,Norma Neff,Jan M. Skotheim,Marius Wernig,Stephen R. Quake	321
20	Human cerebral organoids recapitulate gene expression programs of fetal neocortex developmentbreakdown → 2015 ·Proceedings of the National Academy of Sciences ·J. Gray Camp,(unknown),Marta Florio,Sabina Kanton,Tobias Gerber,Michaela Wilsch‐Bräuninger,Éric Lewitus,Alex M. Sykes,Wulf Hevers,Madeline A. Lancaster,Juergen A. Knoblich,Robert Lachmann,Svante Pääbo,Wieland Β. Huttner,Barbara Treutlein	767

About Barbara Treutlein

Barbara Treutlein is a scholar working on Developmental Neuroscience, Biophysics and Molecular Biology, having authored 73 papers that have together received 7.4k indexed citations. Recurring topics across this work include Single-cell and spatial transcriptomics (39 papers), Pluripotent Stem Cells Research (19 papers) and CRISPR and Genetic Engineering (11 papers). The work is most often cited by research in Developmental Neuroscience (688 citations), Molecular Biology (5.6k citations) and Biophysics (439 citations). Barbara Treutlein has collaborated with scholars based in Germany, Switzerland and United States. Frequent co-authors include J. Gray Camp, Stephen R. Quake, Norma Neff, Gary L. Mantalas, Angela Ruohao Wu, Douglas Brownfield, Sabina Kanton, Tobias Gerber, Tushar Desai and Mark A. Krasnow. Their work appears in journals such as Nature, Science and Cell.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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