Tyson R. Shepherd

1.6k total citations · 1 hit paper
21 papers, 1.1k citations indexed

About

Tyson R. Shepherd is a scholar working on Molecular Biology, Cell Biology and Ecology. According to data from OpenAlex, Tyson R. Shepherd has authored 21 papers receiving a total of 1.1k indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Molecular Biology, 6 papers in Cell Biology and 4 papers in Ecology. Recurrent topics in Tyson R. Shepherd's work include Advanced biosensing and bioanalysis techniques (8 papers), RNA Interference and Gene Delivery (7 papers) and Bacteriophages and microbial interactions (4 papers). Tyson R. Shepherd is often cited by papers focused on Advanced biosensing and bioanalysis techniques (8 papers), RNA Interference and Gene Delivery (7 papers) and Bacteriophages and microbial interactions (4 papers). Tyson R. Shepherd collaborates with scholars based in United States, Sweden and China. Tyson R. Shepherd's co-authors include Mark Bathe, Rémi Veneziano, Eike‐Christian Wamhoff, Ernesto J. Fuentes, Hyungmin Jun, Matthew B. Stone, Sakul Ratanalert, Sayak Mukherjee, Benjamin J. Read and Tyson J. Moyer and has published in prestigious journals such as Nucleic Acids Research, Nature Communications and Nature Materials.

In The Last Decade

Tyson R. Shepherd

21 papers receiving 1.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Role of nanoscale antigen organization on B-cell activation probed using DNA origami

2020 311 citations Rémi Veneziano, Tyson J. Moyer et al. Nature Nanotechnology profile →

Peers

Tyson R. Shepherd

MB

ECOLO

BE

IMMUN

CB

Jocelyn Y. Kishi United States

Dan Bracha United States

Eike‐Christian Wamhoff Germany

Lawrence K. Lee Australia

Scott M. Coyle United States

Jaco van der Torre Netherlands

Alexey Y. Koyfman United States

Frédéric Eghiaian France

Weria Pezeshkian Denmark

Jocelyn Y. Kishi United States

Tyson R. Shepherd

1.2k ×1.3

MB

112 ×0.6

ECOLO

298 ×1.8

BE

74 ×0.6

IMMUN

27 ×0.3

CB

Citations per year, relative to Tyson R. Shepherd Tyson R. Shepherd (= 1×) peers Jocelyn Y. Kishi

Countries citing papers authored by Tyson R. Shepherd

Since Specialization

Citations

This map shows the geographic impact of Tyson R. Shepherd's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tyson R. Shepherd with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tyson R. Shepherd more than expected).

Fields of papers citing papers by Tyson R. Shepherd

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tyson R. Shepherd. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tyson R. Shepherd. The network helps show where Tyson R. Shepherd may publish in the future.

Co-authorship network of co-authors of Tyson R. Shepherd

This figure shows the co-authorship network connecting the top 25 collaborators of Tyson R. Shepherd. A scholar is included among the top collaborators of Tyson R. Shepherd based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tyson R. Shepherd. Tyson R. Shepherd is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

1.

Allan, Matthew F., Shanshan Li, Tyson R. Shepherd, et al.. (2023). 3D RNA-scaffolded wireframe origami. Nature Communications. 14(1). 382–382. 29 indexed citations

2.

Arrieta‐Ortiz, Mario L., Min Pan, Amardeep Kaur, et al.. (2022). Disrupting the ArcA Regulatory Network Amplifies the Fitness Cost of Tetracycline Resistance in Escherichia coli. mSystems. 8(1). e0090422–e0090422. 9 indexed citations

3.

Banal, James L., Tyson R. Shepherd, Miguel Reyes, et al.. (2021). Random access DNA memory using Boolean search in an archival file storage system. Nature Materials. 20(9). 1272–1280. 93 indexed citations

4.

Banal, James L., et al.. (2021). lcbb/DNA-Memory-Blocks: Publication release. Zenodo (CERN European Organization for Nuclear Research). 1 indexed citations

5.

Veneziano, Rémi, Tyson J. Moyer, Matthew B. Stone, et al.. (2020). Role of nanoscale antigen organization on B-cell activation probed using DNA origami. Nature Nanotechnology. 15(8). 716–723. 311 indexed citations breakdown →

6.

Jun, Hyungmin, Fei Zhang, Tyson R. Shepherd, et al.. (2019). Autonomously designed free-form 2D DNA origami. Science Advances. 5(1). eaav0655–eaav0655. 111 indexed citations

7.

Shepherd, Tyson R., et al.. (2019). Bioproduction of pure, kilobase-scale single-stranded DNA. Scientific Reports. 9(1). 6121–6121. 45 indexed citations

8.

Liu, Xu, et al.. (2019). Conformational Dynamics and Cooperativity Drive the Specificity of a Protein-Ligand Interaction. Biophysical Journal. 116(12). 2314–2330. 8 indexed citations

9.

Wamhoff, Eike‐Christian, James L. Banal, William P. Bricker, et al.. (2019). Programming Structured DNA Assemblies to Probe Biophysical Processes. Annual Review of Biophysics. 48(1). 395–419. 53 indexed citations

10.

Jun, Hyungmin, Tyson R. Shepherd, Kaiming Zhang, et al.. (2019). Automated Sequence Design of 3D Polyhedral Wireframe DNA Origami with Honeycomb Edges. ACS Nano. 13(2). 2083–2093. 94 indexed citations

11.

Veneziano, Rémi, et al.. (2018). In vitro synthesis of gene-length single-stranded DNA. Scientific Reports. 8(1). 6548–6548. 64 indexed citations

12.

Shepherd, Tyson R., Liping Du, Samudyata Samudyata, et al.. (2017). De novo design and synthesis of a 30-cistron translation-factor module. Nucleic Acids Research. 45(18). 10895–10905. 28 indexed citations

13.

Liu, Xu, Tyson R. Shepherd, Young Joo Sun, et al.. (2016). Distinct Roles for Conformational Dynamics in Protein-Ligand Interactions. Structure. 24(12). 2053–2066. 19 indexed citations

14.

Liu, Xu, Tyson R. Shepherd, Ann Murray, Zhen Xu, & Ernesto J. Fuentes. (2013). The Structure of the Tiam1 PDZ Domain/ Phospho-Syndecan1 Complex Reveals a Ligand Conformation that Modulates Protein Dynamics. Structure. 21(3). 342–354. 32 indexed citations

15.

Shepherd, Tyson R., et al.. (2013). Structural and functional insights into the molecular mechanism of rRNA m6A methyltransferase RlmJ. Nucleic Acids Research. 41(20). 9537–9548. 22 indexed citations

16.

Liu, Yunhao, Caitlin Collins, William B. Kiosses, et al.. (2013). A novel pathway spatiotemporally activates Rac1 and redox signaling in response to fluid shear stress. The Journal of Cell Biology. 201(6). 863–873. 58 indexed citations

17.

Shepherd, Tyson R., et al.. (2012). Crystal structure of RlmM, the 2′O-ribose methyltransferase for C2498 of Escherichia coli 23S rRNA. Nucleic Acids Research. 40(20). 10507–10520. 11 indexed citations

18.

Shepherd, Tyson R., Suzi Klaus, Xu Liu, et al.. (2010). The Tiam1 PDZ Domain Couples to Syndecan1 and Promotes Cell–Matrix Adhesion. Journal of Molecular Biology. 398(5). 730–746. 39 indexed citations

19.

Shepherd, Tyson R. & Ernesto J. Fuentes. (2010). Structural and Thermodynamic Analysis of PDZ–Ligand Interactions. Methods in enzymology on CD-ROM/Methods in enzymology. 488. 81–100. 16 indexed citations

20.

Rosa, Epaminondas, et al.. (2003). Dynamics of an electronic impact oscillator. Physics Letters A. 318(6). 514–521. 4 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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