Simone Aureli

459 total citations
17 papers, 143 citations indexed

About

Simone Aureli is a scholar working on Molecular Biology, Computational Theory and Mathematics and Artificial Intelligence. According to data from OpenAlex, Simone Aureli has authored 17 papers receiving a total of 143 indexed citations (citations by other indexed papers that have themselves been cited), including 12 papers in Molecular Biology, 4 papers in Computational Theory and Mathematics and 3 papers in Artificial Intelligence. Recurrent topics in Simone Aureli's work include Protein Structure and Dynamics (6 papers), Computational Drug Discovery Methods (4 papers) and Receptor Mechanisms and Signaling (3 papers). Simone Aureli is often cited by papers focused on Protein Structure and Dynamics (6 papers), Computational Drug Discovery Methods (4 papers) and Receptor Mechanisms and Signaling (3 papers). Simone Aureli collaborates with scholars based in Switzerland, United Kingdom and Italy. Simone Aureli's co-authors include Francesco Luigi Gervasio, Valerio Rizzi, Miriam Stoeber, Narjes Ansari, Vittorio Limongelli, Richard D. Taylor, Stefano Raniolo, Benjamin P. Cossins, E Capozzi and Silvia Morante and has published in prestigious journals such as The Journal of Chemical Physics, Bioinformatics and Biophysical Journal.

In The Last Decade

Simone Aureli

15 papers receiving 143 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Simone Aureli Switzerland	8	104	27	25	19	18	17	143
Raphael Alhadeff Israel	12	210 2.0×	36 1.3×	16 0.6×	25 1.3×	19 1.1×	18	310
Assaf Elazar Israel	8	283 2.7×	46 1.7×	14 0.6×	14 0.7×	30 1.7×	8	371
José Guilherme de Almeida Portugal	8	152 1.5×	20 0.7×	42 1.7×	8 0.4×	11 0.6×	22	231
Linhua Tai China	6	171 1.6×	61 2.3×	8 0.3×	7 0.4×	13 0.7×	8	218
Vladimir Rynkov United States	3	202 1.9×	10 0.4×	34 1.4×	16 0.8×	12 0.7×	3	256
Shenglong Ling China	9	147 1.4×	42 1.6×	14 0.6×	33 1.7×	16 0.9×	14	257
Pooja Suresh United States	7	232 2.2×	15 0.6×	41 1.6×	11 0.6×	75 4.2×	9	296
Shristi Pawnikar United States	6	204 2.0×	18 0.7×	59 2.4×	17 0.9×	14 0.8×	14	291
Brook T. Wassie United States	5	130 1.3×	40 1.5×	10 0.4×	4 0.2×	18 1.0×	5	181
Alexander Cumberworth United Kingdom	7	239 2.3×	14 0.5×	19 0.8×	4 0.2×	33 1.8×	8	292

Countries citing papers authored by Simone Aureli

Since Specialization

Citations

This map shows the geographic impact of Simone Aureli's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Simone Aureli with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Simone Aureli more than expected).

Fields of papers citing papers by Simone Aureli

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Simone Aureli. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Simone Aureli. The network helps show where Simone Aureli may publish in the future.

Co-authorship network of co-authors of Simone Aureli

This figure shows the co-authorship network connecting the top 25 collaborators of Simone Aureli. A scholar is included among the top collaborators of Simone Aureli based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Simone Aureli. Simone Aureli is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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17 of 17 papers shown

Aureli, Simone, et al.. (2025). Learning committor-consistent collective variables. Nature Computational Science. 5(7). 520–521. 2 indexed citations

Aureli, Simone, et al.. (2025). Enhanced Sampling and Tailored Collective Variables Yield Reproducible Free Energy Landscapes of Beta-1 Adrenergic Receptor Activation. Journal of Chemical Theory and Computation. 21(15). 7687–7700. 2 indexed citations

Rizzi, Valerio, et al.. (2025). The Arch from the Stones: Understanding Protein Folding Energy Landscapes via Bioinspired Collective Variables. The Journal of Physical Chemistry Letters. 16(37). 9636–9645.

Aureli, Simone, et al.. (2025). All you need is water: Converging ligand binding simulations with hydration collective variables. The Journal of Chemical Physics. 163(16).

Rizzi, Valerio, et al.. (2024). Absolute Binding Free Energies with OneOPES. The Journal of Physical Chemistry Letters. 15(39). 9871–9880. 7 indexed citations

Rizzi, Valerio, et al.. (2024). DeepLNE++ leveraging knowledge distillation for accelerated multi-state path-like collective variables. The Journal of Chemical Physics. 161(11). 2 indexed citations

Rizzi, Valerio, et al.. (2024). Host–Guest Binding Free Energies à la Carte: An Automated OneOPES Protocol. Journal of Chemical Theory and Computation. 20(22). 10275–10287. 4 indexed citations

Aureli, Simone, et al.. (2024). Investigating Ligand-Mediated Conformational Dynamics of Pre-miR21: A Machine-Learning-Aided Enhanced Sampling Study. Journal of Chemical Information and Modeling. 64(22). 8595–8603. 3 indexed citations

Aureli, Simone, et al.. (2023). Conformational plasticity and allosteric communication networks explain Shelterin protein TPP1 binding to human telomerase. Communications Chemistry. 6(1). 242–242. 4 indexed citations

10.

Aureli, Simone, et al.. (2023). Subcellular location defines GPCR signal transduction. Science Advances. 9(16). eadf6059–eadf6059. 30 indexed citations

11.

Rizzi, Valerio, Simone Aureli, Narjes Ansari, & Francesco Luigi Gervasio. (2023). OneOPES, a Combined Enhanced Sampling Method to Rule Them All. Journal of Chemical Theory and Computation. 19(17). 5731–5742. 23 indexed citations

12.

Lorenzo, Giorgia Di, Francescopaolo Iavarone, Simone Aureli, et al.. (2022). Phosphorylation of FAM134C by CK2 controls starvation-induced ER-phagy. Science Advances. 8(35). eabo1215–eabo1215. 23 indexed citations

13.

Aureli, Simone, et al.. (2022). Open Binding Pose Metadynamics: An Effective Approach for the Ranking of Protein–Ligand Binding Poses. Journal of Chemical Information and Modeling. 62(23). 6209–6216. 17 indexed citations

14.

Aureli, Simone, et al.. (2021). Drug Repurposing on G Protein-Coupled Receptors Using a Computational Profiling Approach. Frontiers in Molecular Biosciences. 8. 673053–673053. 7 indexed citations

15.

Aureli, Simone, Daniele Di Marino, Stefano Raniolo, & Vittorio Limongelli. (2019). DDT - Drug Discovery Tool: a fast and intuitive graphics user interface for docking and molecular dynamics analysis. Bioinformatics. 35(24). 5328–5330. 7 indexed citations

16.

Capozzi, E, Simone Aureli, Velia Minicozzi, et al.. (2018). Designing effective anticancer-radiopeptides. A Molecular Dynamics study of their interaction with model tumor and healthy cell membranes. Biochimica et Biophysica Acta (BBA) - Biomembranes. 1860(11). 2348–2355. 9 indexed citations

17.

Luca, Vincenzo De, et al.. (2014). How Many AMP Molecules Kill a Bacterium? Spectroscopic Determination of PMAP-23 Binding to E. Coli. Biophysical Journal. 106(2). 292a–292a. 3 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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