Shaomei He

3.9k total citations · 2 hit papers
35 papers, 3.0k citations indexed

About

Shaomei He is a scholar working on Environmental Engineering, Pollution and Ecology. According to data from OpenAlex, Shaomei He has authored 35 papers receiving a total of 3.0k indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Environmental Engineering, 13 papers in Pollution and 13 papers in Ecology. Recurrent topics in Shaomei He's work include Microbial Fuel Cells and Bioremediation (17 papers), Wastewater Treatment and Nitrogen Removal (13 papers) and Microbial Community Ecology and Physiology (12 papers). Shaomei He is often cited by papers focused on Microbial Fuel Cells and Bioremediation (17 papers), Wastewater Treatment and Nitrogen Removal (13 papers) and Microbial Community Ecology and Physiology (12 papers). Shaomei He collaborates with scholars based in United States, Australia and Sweden. Shaomei He's co-authors include Katherine D. McMahon, Eric Roden, Daniel L. Gall, Susannah G. Tringe, Philip Hugenholtz, Edward Kirton, Jason J. Flowers, Natalia Ivanova, Julien Tremblay and Falk Warnecke and has published in prestigious journals such as Environmental Science & Technology, Nature Biotechnology and PLoS ONE.

In The Last Decade

Shaomei He

35 papers receiving 3.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities

2006 571 citations Héctor García Martín, Natalia Ivanova et al. Nature Biotechnology profile →
Primer and platform effects on 16S rRNA tag sequencing

2015 387 citations Julien Tremblay, Kanwar Pal Singh et al. Frontiers in Microbiology profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Shaomei He United States	24	1.5k	1.1k	968	749	530	35	3.0k
Jochen A. Müller Germany	30	1.3k 0.9×	938 0.9×	368 0.4×	896 1.2×	624 1.2×	81	3.4k
Jack van de Vossenberg Netherlands	34	2.5k 1.7×	1.8k 1.7×	904 0.9×	982 1.3×	591 1.1×	56	4.6k
Márton Palatinszky Hungary	15	1.7k 1.1×	1.7k 1.6×	468 0.5×	948 1.3×	374 0.7×	26	3.5k
Simon Jon McIlroy Australia	35	2.5k 1.7×	1.5k 1.4×	1.0k 1.1×	896 1.2×	857 1.6×	77	4.0k
Bernd Bendinger Germany	9	1.4k 1.0×	1.2k 1.1×	416 0.4×	491 0.7×	353 0.7×	17	2.5k
Rasmus Hansen Kirkegaard Denmark	20	2.1k 1.5×	2.0k 1.9×	657 0.7×	1.4k 1.8×	528 1.0×	28	4.3k
Kim Heylen Belgium	33	1.5k 1.0×	1.6k 1.5×	445 0.5×	1.3k 1.7×	246 0.5×	54	3.8k
Arnaud Dechesne Denmark	32	1.6k 1.1×	1.4k 1.3×	410 0.4×	904 1.2×	277 0.5×	81	3.5k
Natuschka Lee Germany	23	993 0.7×	1.3k 1.2×	353 0.4×	877 1.2×	234 0.4×	38	2.6k
Yiguo Hong China	33	1.7k 1.2×	1.8k 1.7×	395 0.4×	479 0.6×	234 0.4×	119	3.3k

Countries citing papers authored by Shaomei He

Since Specialization

Citations

This map shows the geographic impact of Shaomei He's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Shaomei He with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Shaomei He more than expected).

Fields of papers citing papers by Shaomei He

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Shaomei He. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Shaomei He. The network helps show where Shaomei He may publish in the future.

Co-authorship network of co-authors of Shaomei He

This figure shows the co-authorship network connecting the top 25 collaborators of Shaomei He. A scholar is included among the top collaborators of Shaomei He based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Shaomei He. Shaomei He is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Zhou, Hongyu, et al.. (2023). Systematic gene therapy derived from an investigative study of AAV2/8 vector gene therapy for Fabry disease. Orphanet Journal of Rare Diseases. 18(1). 275–275. 6 indexed citations

He, Shaomei, Alexandra M. Linz, Sarah Stevens, et al.. (2023). Diversity, distribution, and expression of opsin genes in freshwater lakes. Molecular Ecology. 32(11). 2798–2817. 2 indexed citations

He, Shaomei, Maximilian P. Lau, Alexandra M. Linz, Eric Roden, & Katherine D. McMahon. (2019). Extracellular Electron Transfer May Be an Overlooked Contribution to Pelagic Respiration in Humic-Rich Freshwater Lakes. mSphere. 4(1). 27 indexed citations

Linz, Alexandra M., Shaomei He, Sarah Stevens, et al.. (2018). Freshwater carbon and nutrient cycles revealed through reconstructed population genomes. PeerJ. 6. e6075–e6075. 56 indexed citations

Hamilton, Joshua J., David M. Stevenson, Shaomei He, et al.. (2018). acI Actinobacteria Assemble a Functional Actinorhodopsin with Natively Synthesized Retinal. Applied and Environmental Microbiology. 84(24). 16 indexed citations

Fortney, Nathaniel W., Shaomei He, Brandon J. Converse, Eric S. Boyd, & Eric Roden. (2018). Investigating the Composition and Metabolic Potential of Microbial Communities in Chocolate Pots Hot Springs. Frontiers in Microbiology. 9. 2075–2075. 19 indexed citations

He, Shaomei, Sarah Stevens, Leong‐Keat Chan, et al.. (2017). Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes. mSphere. 2(5). 90 indexed citations

He, Shaomei, Roman A. Barco, David Emerson, & Eric Roden. (2017). Comparative Genomic Analysis of Neutrophilic Iron(II) Oxidizer Genomes for Candidate Genes in Extracellular Electron Transfer. Frontiers in Microbiology. 8. 1584–1584. 101 indexed citations

Tremblay, Julien, Kanwar Pal Singh, Edward Kirton, et al.. (2015). Primer and platform effects on 16S rRNA tag sequencing. Frontiers in Microbiology. 6. 771–771. 387 indexed citations breakdown →

10.

He, Shaomei, Natalia Ivanova, Edward Kirton, et al.. (2013). Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites. PLoS ONE. 8(4). e61126–e61126. 133 indexed citations

11.

Skennerton, Connor T., Florent Angly, Mya Breitbart, et al.. (2011). Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System. PLoS ONE. 6(5). e20095–e20095. 47 indexed citations

12.

He, Shaomei & Katherine D. McMahon. (2011). Microbiology of ‘ Candidatus Accumulibacter’ in activated sludge. Microbial Biotechnology. 4(5). 603–619. 106 indexed citations

13.

He, Shaomei & Katherine D. McMahon. (2010). ‘ Candidatus Accumulibacter’ gene expression in response to dynamic EBPR conditions. The ISME Journal. 5(2). 329–340. 61 indexed citations

14.

He, Shaomei, et al.. (2010). Bacterial Community and “ Candidatus Accumulibacter” Population Dynamics in Laboratory-Scale Enhanced Biological Phosphorus Removal Reactors. Applied and Environmental Microbiology. 76(16). 5479–5487. 33 indexed citations

15.

Flowers, Jason J., et al.. (2009). Denitrification capabilities of two biological phosphorus removal sludges dominated by different ‘ Candidatus Accumulibacter’ clades. Environmental Microbiology Reports. 1(6). 583–588. 184 indexed citations

16.

McMahon, Katherine D., Suzan Yilmaz, Shaomei He, et al.. (2007). Polyphosphate kinase genes from full-scale activated sludge plants. Applied Microbiology and Biotechnology. 77(1). 167–173. 72 indexed citations

17.

He, Shaomei, April Z. Gu, & Katherine D. McMahon. (2007). Progress Toward Understanding the Distribution of Accumulibacter Among Full-Scale Enhanced Biological Phosphorus Removal Systems. Microbial Ecology. 55(2). 229–236. 81 indexed citations

18.

He, Shaomei, Daniel L. Gall, & Katherine D. McMahon. (2007). “ Candidatus Accumulibacter” Population Structure in Enhanced Biological Phosphorus Removal Sludges as Revealed by Polyphosphate Kinase Genes. Applied and Environmental Microbiology. 73(18). 5865–5874. 242 indexed citations

19.

Martín, Héctor García, Victor Kunin, Falk Warnecke, et al.. (2006). Metagenomic analysis of phosphorus removing sludge communities. Queensland's institutional digital repository (The University of Queensland). 9 indexed citations

20.

Martín, Héctor García, Natalia Ivanova, Victor Kunin, et al.. (2006). Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities. Nature Biotechnology. 24(10). 1263–1269. 571 indexed citations breakdown →

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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