Rasmus Ågren

4.8k citations

20 papers · 2.4k indexed · 1 hit paper · h-index 17

Impact in

Molecular Biology top 5%
- Microbial Metabolic Engineering and Bioproduction
- Bioinformatics and Genomic Networks
- Gene Regulatory Network Analysis
- Metabolomics and Mass Spectrometry Studies
- Enzyme Catalysis and Immobilization
Cancer Research top 10%
- Cancer, Hypoxia, and Metabolism

Papers in

Nephrology 2
- Chronic Kidney Disease and Diabetes 2
Molecular Biology 15
- Microbial Metabolic Engineering and Bioproduction 12
- Gene Regulatory Network Analysis 4
- Bioinformatics and Genomic Networks 4
- Metabolomics and Mass Spectrometry Studies 3
- Enzyme Catalysis and Immobilization 3

Co-authors: Jens Nielsen Adil Mardinoğlu Intawat Nookaew Mathias Uhlén Caroline Kampf Anna Asplund Sergio Bordel Saeed Shoaie
Journals: PLoS Computational Biology (5 papers)BMC Systems Biology (2 papers)Molecular Systems Biology (2 papers)iScience (1 paper)Scientific Reports (1 paper)
Partner nations: Sweden United States United Kingdom

In The Last Decade

Rasmus Ågren

20 papers receiving 2.4k citations

Hit Papers

align trajectories log scale

Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease 2014 · 388 citations

Peers

Countries citing papers authored by Rasmus Ågren

Since Specialization

Citations

This map shows the geographic impact of Rasmus Ågren's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Rasmus Ågren with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Rasmus Ågren more than expected).

Fields of papers citing papers by Rasmus Ågren

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Rasmus Ågren. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Rasmus Ågren. The network helps show where Rasmus Ågren may publish in the future.

Co-authors

The 25 scholars most cited alongside Rasmus Ågren, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Rasmus Ågren Line = papers co-authored together Rasmus Ågren links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	Multi-omics and imaging mass cytometry characterization of human kidneys to identify pathways and phenotypes associated with impaired kidney function Kidney International ·Ignacio Mosqueda Mugurusa, Simone Romoli, Galli Matienzo C, Jennifer Y. Tan, J J Ye, Margaret M. Huang, Krishnaa T. Mahbubani, Mani Chandrika P, Daniel Jachimowicz, Rasmus Ågren, Albert Koulman, Benjamin Jenkins, Barbara Musiał, Julian L. Griffin, Magnus Söderberg, Stephanie Ling, Pernille Hansen, Kourosh Saeb‐Parsy, Kevin Woollard	2024	11
2	APOL1 promotes endothelial cell activation beyond the glomerulus iScience ·Miguel Carracedo, Elke Ericson, Rasmus Ågren, Anna Forslöw, Katja Madeyski-Bengtson, Anna Svensson, Francoline Jong Nkemnkeng, Jonas Christoffersson, Hernán González‐King, Amina Kherrour, Ryan Hicks, Lisa Buvall, Tushar Malica, Peter J. Greasley, Mark Lal	2023	9
3	In vivo screen identifies a SIK inhibitor that induces β cell proliferation through a transient UPR Nature Metabolism ·P Sunithapriya, P Rummer, Rohit B. Sharma, Anna Johansson, Rasmus Ågren, Lianhe Chu, F. M. Watkins, Nadja Schulz, Pierre Charbord, Andrew F. Stewart, Peng Wang, Laura Alonso, Olov Andersson	2021	26
4	ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes Scientific Reports ·오기창, Rasmus Ågren, Cajsa Davegårdh, Petr Volkov, Tina Rönn, Per Unneberg, Karl Bacos, Charlotte Ling	2019	43
5	RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor PLoS Computational Biology ·Hao Wang, Simonas Marcišauskas, Benjamín J. Sánchez, Iván Domenzain, 陈情, Rasmus Ågren, Jens Nielsen, Eduard J. Kerkhoven	2018	233
6	Archaeal community changes in Lateglacial lake sediments: Evidence from ancient DNA Quaternary Science Reviews ·V. L. Melnik, Laura Parducci, Per Unneberg, Rasmus Ågren, Frederik Schenk, Jayne E. Rattray, P. Chen, Francesco Muschitiello, Mikkel Winther Pedersen, Rienk H. Smittenberg, Kweku Afrifa Yamoah, Tanja Slotte, Barbara Wohlfarth	2017	36
7	Metabolome dynamics of diapause in the butterfly Pieris napi: distinguishing maintenance, termination and post-diapause phases Journal of Experimental Biology ·Philipp Lehmann, Peter Pruisscher, Vladimı́r Košťál, Martin Moos, Petr Šimek, Sören Nylin, Rasmus Ågren, Leif Väremo, Christer Wiklund, Christopher W. Wheat, Karl Gotthard	2017	21
8	Metabolic Needs and Capabilities of Toxoplasma gondii through Combined Computational and Experimental Analysis PLoS Computational Biology ·L. Lehtonen, Rebecca D. Oppenheim, Rasmus Ågren, Jens Nielsen, Dominique Soldati‐Favre, Vassily Hatzimanikatis	2015	69
9	Identification of anticancer drugs for hepatocellular carcinoma through personalized genome‐scale metabolic modeling Molecular Systems Biology ·Rasmus Ågren, Adil Mardinoğlu, Anna Asplund, Caroline Kampf, Mathias Uhlén, Jens Nielsen	2014	280
10	Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease Nature Communications ·Adil Mardinoğlu, Rasmus Ågren, Caroline Kampf, Anna Asplund, Mathias Uhlén, Jens Nielsen Hit paper breakdown →	2014	388
11	Integration of clinical data with a genome‐scale metabolic model of the human adipocyte Molecular Systems Biology ·Adil Mardinoğlu, Rasmus Ågren, Caroline Kampf, Anna Asplund, Intawat Nookaew, Peter Jacobson, Andrew J. Walley, Philippe Froguel, Lena Carlsson, Mathias Uhlén, Jens Nielsen	2013	182
12	The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum PLoS Computational Biology ·Rasmus Ågren, Li Liu, Saeed Shoaie, Wanwipa Vongsangnak, Intawat Nookaew, Jens Nielsen	2013	319
13	On metabolic networks and multi-omics integration Chalmers Publication Library (Chalmers University of Technology) ·Rasmus Ågren	2013	1
14	Genome-scale modeling enables metabolic engineering of Saccharomyces cerevisiae for succinic acid production Journal of Industrial Microbiology & Biotechnology ·Rasmus Ågren, José M. Otero, Jens Nielsen	2013	61
15	Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials BMC Systems Biology ·Luis Caspeta, Saeed Shoaie, Rasmus Ågren, Intawat Nookaew, Jens Nielsen	2012	100
16	Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT PLoS Computational Biology ·Rasmus Ågren, Sergio Bordel, Adil Mardinoğlu, Natapol Pornputtapong, Intawat Nookaew, Jens Nielsen	2012	327
17	MEMOSys: Bioinformatics platform for genome-scale metabolic models BMC Systems Biology ·Stephan Pabinger, Jan BUKÁČEK, Rasmus Ågren, Jens Nielsen, Zlatko Trajanoski	2011	27
18	Sampling the Solution Space in Genome-Scale Metabolic Networks Reveals Transcriptional Regulation in Key Enzymes PLoS Computational Biology ·Sergio Bordel, Rasmus Ågren, Jens Nielsen	2010	141
19	Use of genome‐scale metabolic models for understanding microbial physiology FEBS Letters ·Li Liu, Rasmus Ågren, Sergio Bordel, Jens Nielsen	2010	73
20	BioMet Toolbox: genome-wide analysis of metabolism Nucleic Acids Research ·Marija Cvijović, Roberto Olivares‐Hernández, Rasmus Ågren, H. J. Birch, Wanwipa Vongsangnak, Intawat Nookaew, Kiran Raosaheb Patil, Jens Nielsen	2010	73

About Rasmus Ågren

Rasmus Ågren is a scholar working on Nephrology, Molecular Biology, Parasitology, Biomedical Engineering and Environmental Chemistry, having authored 20 papers that have together received 2.4k indexed citations. Recurring topics across this work include Microbial Metabolic Engineering and Bioproduction (12 papers), Biofuel production and bioconversion (6 papers), Gene Regulatory Network Analysis (4 papers), Bioinformatics and Genomic Networks (4 papers), Metabolomics and Mass Spectrometry Studies (3 papers), Enzyme Catalysis and Immobilization (3 papers), Chronic Kidney Disease and Diabetes (2 papers) and Pancreatic function and diabetes (2 papers). The work is most often cited by research in Molecular Biology (2.1k citations), Cancer Research (236 citations), Biomedical Engineering (554 citations), Biochemistry (67 citations) and Physiology (208 citations). Rasmus Ågren has collaborated with scholars based in Sweden, United States and United Kingdom. Frequent co-authors include Jens Nielsen, Adil Mardinoğlu, Intawat Nookaew, Mathias Uhlén, Caroline Kampf, Anna Asplund, Sergio Bordel, Saeed Shoaie, Li Liu and Wanwipa Vongsangnak. Their work appears in journals such as PLoS Computational Biology, BMC Systems Biology, Molecular Systems Biology, iScience and Scientific Reports.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact