Paramvir Dehal

33.7k total citations · 3 hit papers
25 papers, 16.3k citations indexed

About

Paramvir Dehal is a scholar working on Molecular Biology, Ecology and Genetics. According to data from OpenAlex, Paramvir Dehal has authored 25 papers receiving a total of 16.3k indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 8 papers in Ecology and 5 papers in Genetics. Recurrent topics in Paramvir Dehal's work include Genomics and Phylogenetic Studies (17 papers), Microbial Community Ecology and Physiology (8 papers) and RNA and protein synthesis mechanisms (5 papers). Paramvir Dehal is often cited by papers focused on Genomics and Phylogenetic Studies (17 papers), Microbial Community Ecology and Physiology (8 papers) and RNA and protein synthesis mechanisms (5 papers). Paramvir Dehal collaborates with scholars based in United States, Sweden and South Korea. Paramvir Dehal's co-authors include Adam P. Arkin, Morgan N. Price, Jeffrey L. Boore, Paul M. Richardson, Erika Lindquist, Yong‐Su Jin, Andrea Aerts, Jeremy Schmutz, José M. Laplaza and Volkmar Passoth and has published in prestigious journals such as Science, Nucleic Acids Research and Nature Biotechnology.

In The Last Decade

Paramvir Dehal

24 papers receiving 16.1k citations

Hit Papers

FastTree 2 – Approximately Maximum-Likelihood Trees for L... 2005 2026 2012 2019 2010 2009 2005 2.5k 5.0k 7.5k
What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

  1. FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
    2010 10.0k citations Morgan N. Price, Paramvir Dehal et al. PLoS ONE profile →
  2. FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
    2009 3.9k citations Morgan N. Price, Paramvir Dehal et al. Molecular Biology and Evolution profile →
  3. Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate
    2005 1.1k citations Paramvir Dehal, Jeffrey L. Boore PLoS Biology profile →

Peers

Paramvir Dehal
Eric P. Nawrocki United States
Søren J. Sørensen Denmark
Morgan N. Price United States
Weizhong Li United States
Ashlee M. Earl United States
Jia Gu China
Yanqing Zhou China
Jason W. Sahl United States
Marcel Martin Germany
Christian L. Lauber United States
Eric P. Nawrocki United States
Paramvir Dehal
Citations per year, relative to Paramvir Dehal Paramvir Dehal (= 1×) peers Eric P. Nawrocki

Countries citing papers authored by Paramvir Dehal

Since Specialization
Citations

This map shows the geographic impact of Paramvir Dehal's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Paramvir Dehal with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Paramvir Dehal more than expected).

Fields of papers citing papers by Paramvir Dehal

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Paramvir Dehal. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Paramvir Dehal. The network helps show where Paramvir Dehal may publish in the future.

Co-authorship network of co-authors of Paramvir Dehal

This figure shows the co-authorship network connecting the top 25 collaborators of Paramvir Dehal. A scholar is included among the top collaborators of Paramvir Dehal based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Paramvir Dehal. Paramvir Dehal is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Chivian, Dylan, Sean P. Jungbluth, Paramvir Dehal, et al.. (2022). Metagenome-assembled genome extraction and analysis from microbiomes using KBase. Nature Protocols. 18(1). 208–238. 56 indexed citations
2.
Chakraborty, Romy, Hannah L. Woo, Paramvir Dehal, et al.. (2017). Complete genome sequence of Pseudomonas stutzeri strain RCH2 isolated from a Hexavalent Chromium [Cr(VI)] contaminated site. Standards in Genomic Sciences. 12(1). 23–23. 15 indexed citations
3.
Novichkov, Pavel S., Thomas Brettin, Paramvir Dehal, et al.. (2012). RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics. Nucleic Acids Research. 40(W1). W604–W608. 18 indexed citations
4.
Chivian, Dylan, Paramvir Dehal, Keith Keller, & Adam P. Arkin. (2012). metaMicrobesOnline: phylogenomic analysis of microbial communities. Nucleic Acids Research. 41(D1). D648–D654. 14 indexed citations
5.
Rajeev, Lara, Eric G. Luning, Paramvir Dehal, et al.. (2011). Systematic mapping of two component response regulators to gene targets in a model sulfate reducing bacterium. Genome biology. 12(10). R99–R99. 44 indexed citations
6.
Price, Morgan N., Paramvir Dehal, & Adam P. Arkin. (2010). FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments. PLoS ONE. 5(3). e9490–e9490. 9981 indexed citations breakdown →
7.
Price, Morgan N., Paramvir Dehal, & Adam P. Arkin. (2009). FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix. Molecular Biology and Evolution. 26(7). 1641–1650. 3885 indexed citations breakdown →
8.
Walker, C. B., Sergey Stolyar, Dylan Chivian, et al.. (2009). Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity. Environmental Microbiology. 11(9). 2244–2252. 16 indexed citations
9.
Yang, Yunfeng, Daniel P. Harris, Feng Luo, et al.. (2009). Snapshot of iron response in Shewanella oneidensis by gene network reconstruction. BMC Genomics. 10(1). 131–131. 44 indexed citations
10.
Dehal, Paramvir, et al.. (2009). MicrobesOnline: an integrated portal for comparative and functional genomics. Nucleic Acids Research. 38(Database). D396–D400. 12 indexed citations
11.
Chivian, Dylan, Eoin Brodie, Eric J. Alm, et al.. (2008). Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth. Science. 322(5899). 275–278. 329 indexed citations
12.
Price, Morgan N., Paramvir Dehal, & Adam P. Arkin. (2008). Horizontal gene transfer and the evolution of transcriptional regulation in Escherichia coli. Genome biology. 9(1). R4–R4. 1 indexed citations
13.
Tang, Yinjie, Héctor García Martín, Paramvir Dehal, et al.. (2008). Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism. Biotechnology and Bioengineering. 102(4). 1161–1169. 36 indexed citations
14.
Price, Morgan N., Paramvir Dehal, & Adam P. Arkin. (2008). FastBLAST: Homology Relationships for Millions of Proteins. PLoS ONE. 3(10). e3589–e3589. 13 indexed citations
15.
Jeffries, Thomas W., Igor V. Grigoriev, Jane Grimwood, et al.. (2007). Genomic sequence of the xylose fermenting, insect-inhabiting yeast, Pichia stipitis. University of North Texas Digital Library (University of North Texas). 1 indexed citations
16.
Jeffries, Thomas W., Igor V. Grigoriev, Jane Grimwood, et al.. (2007). Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Nature Biotechnology. 25(3). 319–326. 363 indexed citations
17.
Price, Morgan N., Paramvir Dehal, & Adam P. Arkin. (2007). Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes. PLoS Computational Biology. 3(9). e175–e175. 78 indexed citations
18.
Dehal, Paramvir & Jeffrey L. Boore. (2006). A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database. BMC Bioinformatics. 7(1). 201–201. 46 indexed citations
19.
Dehal, Paramvir & Jeffrey L. Boore. (2005). Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate. PLoS Biology. 3(10). e314–e314. 1114 indexed citations breakdown →
20.
Kim, Joomyeong, Laurie Gordon, Paramvir Dehal, et al.. (2001). Homology-Driven Assembly of a Sequence-Ready Mouse BAC Contig Map Spanning Regions Related to the 46-Mb Gene-Rich Euchromatic Segments of Human Chromosome 19. Genomics. 74(2). 129–141. 32 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact

Breakdown of academic impact, for papers by Eric P. Nawrocki Breakdown of academic impact, for papers by Søren J. Sørensen Breakdown of academic impact, for papers by Morgan N. Price Breakdown of academic impact, for papers by Weizhong Li Breakdown of academic impact, for papers by Ashlee M. Earl Breakdown of academic impact, for papers by Jia Gu Breakdown of academic impact, for papers by Yanqing Zhou Breakdown of academic impact, for papers by Jason W. Sahl Breakdown of academic impact, for papers by Marcel Martin Breakdown of academic impact, for papers by Christian L. Lauber
Rankless by CCL
2026