Nikos Karaiskos

2.3k total citations · 1 hit paper
21 papers, 1.0k citations indexed

About

Nikos Karaiskos is a scholar working on Molecular Biology, Geometry and Topology and Statistical and Nonlinear Physics. According to data from OpenAlex, Nikos Karaiskos has authored 21 papers receiving a total of 1.0k indexed citations (citations by other indexed papers that have themselves been cited), including 13 papers in Molecular Biology, 8 papers in Geometry and Topology and 6 papers in Statistical and Nonlinear Physics. Recurrent topics in Nikos Karaiskos's work include Single-cell and spatial transcriptomics (12 papers), Algebraic structures and combinatorial models (8 papers) and Nonlinear Waves and Solitons (6 papers). Nikos Karaiskos is often cited by papers focused on Single-cell and spatial transcriptomics (12 papers), Algebraic structures and combinatorial models (8 papers) and Nonlinear Waves and Solitons (6 papers). Nikos Karaiskos collaborates with scholars based in Germany, Greece and United States. Nikos Karaiskos's co-authors include Nikolaus Rajewsky, Jonathan Alles, Salah Ayoub, Nir Friedman, Mor Nitzan, Christine Kocks, Anastasiya Boltengagen, Robert P. Zinzen, Philipp Wahle and Ivano Legnini and has published in prestigious journals such as Nature, Science and Cell.

In The Last Decade

Nikos Karaiskos

21 papers receiving 1.0k citations

Hit Papers

Open-ST: High-resolution spatial transcriptomics in 3D 2024 2026 2025 2024 20 40 60
What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

  1. Open-ST: High-resolution spatial transcriptomics in 3D
    2024 66 citations Simon Schallenberg, Jonathan Alles et al. Cell profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Nikos Karaiskos Germany 10 866 150 128 122 66 21 1.0k
Karin Pelka United States 12 691 0.8× 232 1.5× 407 3.2× 44 0.4× 15 0.2× 22 1.1k
R. Brent Calder United States 13 580 0.7× 101 0.7× 63 0.5× 25 0.2× 22 0.3× 17 905
Jonathan Alles Germany 6 527 0.6× 102 0.7× 69 0.5× 64 0.5× 9 0.1× 7 583
Penelope Hayward United Kingdom 17 1.6k 1.8× 110 0.7× 104 0.8× 67 0.5× 7 0.1× 20 1.8k
Swati Parekh Germany 13 794 0.9× 230 1.5× 200 1.6× 75 0.6× 6 0.1× 17 1.1k
Andrew Earl United States 7 908 1.0× 213 1.4× 116 0.9× 146 1.2× 4 0.1× 10 1.0k
Bastiaan Spanjaard Germany 10 895 1.0× 255 1.7× 93 0.7× 113 0.9× 3 0.0× 13 1.1k
Dave Gennert United States 3 1.5k 1.8× 375 2.5× 439 3.4× 144 1.2× 7 0.1× 3 1.9k
Tomislav Ilicic United Kingdom 4 854 1.0× 234 1.6× 150 1.2× 95 0.8× 4 0.1× 4 980
Rhonda Bacher United States 15 768 0.9× 200 1.3× 204 1.6× 76 0.6× 5 0.1× 39 1.1k

Countries citing papers authored by Nikos Karaiskos

Since Specialization
Citations

This map shows the geographic impact of Nikos Karaiskos's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Nikos Karaiskos with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Nikos Karaiskos more than expected).

Fields of papers citing papers by Nikos Karaiskos

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Nikos Karaiskos. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Nikos Karaiskos. The network helps show where Nikos Karaiskos may publish in the future.

Co-authorship network of co-authors of Nikos Karaiskos

This figure shows the co-authorship network connecting the top 25 collaborators of Nikos Karaiskos. A scholar is included among the top collaborators of Nikos Karaiskos based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Nikos Karaiskos. Nikos Karaiskos is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Preibisch, Stephan, et al.. (2025). Scalable image-based visualization and alignment of spatial transcriptomics datasets. Cell Systems. 16(5). 101264–101264. 2 indexed citations
2.
Ferretti, Elisabetta, et al.. (2024). Protocol for high-resolution 3D spatial transcriptomics using Open-ST. STAR Protocols. 6(1). 103521–103521. 3 indexed citations
3.
Schallenberg, Simon, Jonathan Alles, Sebastian Ehrig, et al.. (2024). Open-ST: High-resolution spatial transcriptomics in 3D. Cell. 187(15). 3953–3972.e26. 66 indexed citations breakdown →
4.
Karaiskos, Nikos, et al.. (2024). Challenges and Opportunities in the Clinical Translation of High-Resolution Spatial Transcriptomics. Annual Review of Pathology Mechanisms of Disease. 20(1). 405–432. 8 indexed citations
5.
Jens, Marvin, et al.. (2022). Spacemake: processing and analysis of large-scale spatial transcriptomics data. GigaScience. 11. 19 indexed citations
6.
Rajewsky, Nikolaus, et al.. (2022). Optocoder: computational decoding of spatially indexed bead arrays. NAR Genomics and Bioinformatics. 4(2). lqac042–lqac042. 2 indexed citations
7.
Friedman, Nir, et al.. (2021). NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport. Nature Protocols. 16(9). 4177–4200. 69 indexed citations
8.
Legnini, Ivano, Jonathan Alles, Nikos Karaiskos, Salah Ayoub, & Nikolaus Rajewsky. (2019). FLAM-seq: full-length mRNA sequencing reveals principles of poly(A) tail length control. Nature Methods. 16(9). 879–886. 101 indexed citations
9.
Nitzan, Mor, Nikos Karaiskos, Nir Friedman, & Nikolaus Rajewsky. (2019). Gene expression cartography. Nature. 576(7785). 132–137. 175 indexed citations
10.
Karaiskos, Nikos, Anastasiya Boltengagen, Haiyue Liu, et al.. (2018). A Single-Cell Transcriptome Atlas of the Mouse Glomerulus. Journal of the American Society of Nephrology. 29(8). 2060–2068. 119 indexed citations
11.
Karaiskos, Nikos, Philipp Wahle, Jonathan Alles, et al.. (2017). The Drosophila embryo at single-cell transcriptome resolution. Science. 358(6360). 194–199. 249 indexed citations
12.
Alles, Jonathan, Nikos Karaiskos, Samantha D. Praktiknjo, et al.. (2017). Cell fixation and preservation for droplet-based single-cell transcriptomics. BMC Biology. 15(1). 44–44. 146 indexed citations
13.
Doikou, Anastasia, Stefano Evangelisti, Giovanni Feverati, & Nikos Karaiskos. (2016). Introduction to Quantum Integrability. 7 indexed citations
14.
Frahm, Holger & Nikos Karaiskos. (2015). Non-Abelian ${SU}{(3)}_{k}$ anyons: inversion identities for higher rank face models. Journal of Physics A Mathematical and Theoretical. 48(48). 484001–484001. 1 indexed citations
15.
Frahm, Holger & Nikos Karaiskos. (2014). Inversion identities for inhomogeneous face models. Nuclear Physics B. 887. 423–440. 4 indexed citations
16.
Doikou, Anastasia & Nikos Karaiskos. (2013). Transmission amplitudes from Bethe ansatz equations. Institutional Repository of Leibniz Universität Hannover (Leibniz Universität Hannover). 6 indexed citations
17.
Karaiskos, Nikos, et al.. (2013). Bethe ansatz solution of the small polaron with nondiagonal boundary terms. Journal of Statistical Mechanics Theory and Experiment. 2013(7). P07009–P07009. 5 indexed citations
18.
Doikou, Anastasia & Nikos Karaiskos. (2012). Sigma models in the presence of dynamical point-like defects. Nuclear Physics B. 867(3). 872–886. 11 indexed citations
19.
Doikou, Anastasia & Nikos Karaiskos. (2011). Generalized Landau–Lifshitz models on the interval. Nuclear Physics B. 853(2). 436–460. 3 indexed citations
20.
Doikou, Anastasia & Nikos Karaiskos. (2009). New reflection matrices for theUq(gl(m|n)) case. Journal of Statistical Mechanics Theory and Experiment. 2009(9). L09004–L09004. 4 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact

Breakdown of academic impact, for papers by Karin Pelka Breakdown of academic impact, for papers by R. Brent Calder Breakdown of academic impact, for papers by Jonathan Alles Breakdown of academic impact, for papers by Penelope Hayward Breakdown of academic impact, for papers by Swati Parekh Breakdown of academic impact, for papers by Andrew Earl Breakdown of academic impact, for papers by Bastiaan Spanjaard Breakdown of academic impact, for papers by Dave Gennert Breakdown of academic impact, for papers by Tomislav Ilicic Breakdown of academic impact, for papers by Rhonda Bacher
Rankless by CCL
2026