Mustafa Khammash

10.7k total citations
216 papers, 6.5k citations indexed

About

Mustafa Khammash is a scholar working on Molecular Biology, Control and Systems Engineering and Genetics. According to data from OpenAlex, Mustafa Khammash has authored 216 papers receiving a total of 6.5k indexed citations (citations by other indexed papers that have themselves been cited), including 128 papers in Molecular Biology, 55 papers in Control and Systems Engineering and 39 papers in Genetics. Recurrent topics in Mustafa Khammash's work include Gene Regulatory Network Analysis (116 papers), Microbial Metabolic Engineering and Bioproduction (39 papers) and Stability and Control of Uncertain Systems (28 papers). Mustafa Khammash is often cited by papers focused on Gene Regulatory Network Analysis (116 papers), Microbial Metabolic Engineering and Bioproduction (39 papers) and Stability and Control of Uncertain Systems (28 papers). Mustafa Khammash collaborates with scholars based in United States, Switzerland and Germany. Mustafa Khammash's co-authors include Brian Munsky, Gabriele Lillacci, Ankit Gupta, Hana El‐Samad, Corentin Briat, Vijay Vittal, J.B. Pearson, Armin Baumschlager, Stephanie K. Aoki and Andreas Milias‐Argeitis and has published in prestigious journals such as Nature, Science and Proceedings of the National Academy of Sciences.

In The Last Decade

Mustafa Khammash

207 papers receiving 6.3k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Mustafa Khammash United States 44 4.3k 1.2k 964 628 599 216 6.5k
Klaus Schulten United States 49 3.4k 0.8× 281 0.2× 283 0.3× 711 1.1× 371 0.6× 111 7.1k
Kevin Burrage Australia 56 2.9k 0.7× 367 0.3× 670 0.7× 602 1.0× 728 1.2× 340 10.5k
Pablo A. Iglesias United States 45 3.2k 0.7× 540 0.4× 270 0.3× 1.1k 1.8× 83 0.1× 182 6.4k
James Sneyd New Zealand 43 3.2k 0.8× 221 0.2× 779 0.8× 528 0.8× 172 0.3× 162 7.6k
Guy‐Bart Stan United Kingdom 31 2.2k 0.5× 482 0.4× 546 0.6× 430 0.7× 212 0.4× 112 3.7k
Mario di Bernardo Italy 53 1.8k 0.4× 3.6k 3.0× 410 0.4× 588 0.9× 1.5k 2.5× 362 12.2k
Jörg Stelling Switzerland 31 4.4k 1.0× 187 0.2× 624 0.6× 812 1.3× 49 0.1× 88 5.3k
Zeming Lin China 8 3.1k 0.7× 222 0.2× 198 0.2× 457 0.7× 416 0.7× 19 9.2k
Ziv Bar‐Joseph United States 46 6.8k 1.6× 136 0.1× 736 0.8× 361 0.6× 77 0.1× 160 10.1k
Jean‐Philippe Vert France 48 6.0k 1.4× 148 0.1× 819 0.8× 199 0.3× 99 0.2× 120 9.6k

Countries citing papers authored by Mustafa Khammash

Since Specialization
Citations

This map shows the geographic impact of Mustafa Khammash's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Mustafa Khammash with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Mustafa Khammash more than expected).

Fields of papers citing papers by Mustafa Khammash

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Mustafa Khammash. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Mustafa Khammash. The network helps show where Mustafa Khammash may publish in the future.

Co-authorship network of co-authors of Mustafa Khammash

This figure shows the co-authorship network connecting the top 25 collaborators of Mustafa Khammash. A scholar is included among the top collaborators of Mustafa Khammash based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Mustafa Khammash. Mustafa Khammash is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Khammash, Mustafa, et al.. (2025). Realizing Reduced and Sparse Biochemical Reaction Networks from Dynamics. 1949–1954. 1 indexed citations
2.
Beyer, Hannes M., Kun Tang, Cha San Koh, et al.. (2024). Genetically-stable engineered optogenetic gene switches modulate spatial cell morphogenesis in two- and three-dimensional tissue cultures. Nature Communications. 15(1). 10470–10470. 6 indexed citations
3.
4.
Beyer, Hannes M., et al.. (2024). Image-guided optogenetic spatiotemporal tissue patterning using μPatternScope. Nature Communications. 15(1). 10469–10469. 4 indexed citations
5.
Aoki, Stephanie K., et al.. (2023). Unlocking the potential of optogenetics in microbial applications. Current Opinion in Microbiology. 77. 102404–102404. 12 indexed citations
6.
Baumschlager, Armin, et al.. (2022). Implementation of a Novel Optogenetic Tool in Mammalian Cells Based on a Split T7 RNA Polymerase. ACS Synthetic Biology. 11(8). 2650–2661. 13 indexed citations
7.
Chang, Ching-Hsiang, et al.. (2022). A genetic mammalian proportional–integral feedback control circuit for robust and precise gene regulation. Proceedings of the National Academy of Sciences. 119(24). e2122132119–e2122132119. 43 indexed citations
8.
Dobrzyński, Maciej, Marc‐Antoine Jacques, Agne Frismantiene, et al.. (2022). Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics. Molecular Systems Biology. 18(6). e10670–e10670. 26 indexed citations
9.
Fang, Zhou, Ankit Gupta, & Mustafa Khammash. (2020). Stochastic filters based on hybrid approximations of multiscale stochastic reaction networks. 4616–4621. 4 indexed citations
10.
Stan, Guy‐Bart, et al.. (2020). Characterization and mitigation of gene expression burden in mammalian cells. Nature Communications. 11(1). 4641–4641. 101 indexed citations
11.
Khammash, Mustafa, et al.. (2019). Optimal Parameter Tuning of Feedback Controllers with Application to Biomolecular Antithetic Integral Control. Repository for Publications and Research Data (ETH Zurich). 951–957. 10 indexed citations
12.
Gupta, Ankit, Marc Manceau, Timothy G. Vaughan, Mustafa Khammash, & Tanja Stadler. (2019). The probability distribution of the reconstructed phylogenetic tree with occurrence data. Journal of Theoretical Biology. 488. 110115–110115. 12 indexed citations
13.
Gupta, Ankit & Mustafa Khammash. (2019). An antithetic integral rein controller for bio-molecular networks. 2808–2813. 14 indexed citations
14.
Kazeev, Vladimir, et al.. (2014). Direct Solution of the Chemical Master Equation Using Quantized Tensor Trains. PLoS Computational Biology. 10(3). e1003359–e1003359. 79 indexed citations
15.
Munsky, Brian, et al.. (2010). Listening to the Noise: Random Fluctuations Reveal Gene Network Parameters. University of North Texas Digital Library (University of North Texas). 2010. 2 indexed citations
16.
Megretski, Alexandre & Mustafa Khammash. (2005). Lagrange multipliers method in robust control: the l/sup 1/-setting. 3. 3171–3175. 4 indexed citations
17.
Qi, Xin, Mustafa Khammash, & Murti V. Salapaka. (2001). Optimal controller synthesis with multiple objectives. 44. 2730–2735 vol.4. 14 indexed citations
18.
19.
Khammash, Mustafa, et al.. (1998). Robust steady-state tracking for periodic systems. 37. 3124–3128 vol.5. 1 indexed citations
20.
Salapaka, Murti V., Mustafa Khammash, & M. Dahleh. (1997). Solution of MIMO H2/ℓ1 problem without zero interpolation. 2. 1546–1551. 2 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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