Karim Gharbi

10.1k total citations · 1 hit paper
96 papers, 5.8k citations indexed

About

Karim Gharbi is a scholar working on Genetics, Molecular Biology and Ecology. According to data from OpenAlex, Karim Gharbi has authored 96 papers receiving a total of 5.8k indexed citations (citations by other indexed papers that have themselves been cited), including 57 papers in Genetics, 33 papers in Molecular Biology and 24 papers in Ecology. Recurrent topics in Karim Gharbi's work include Genetic diversity and population structure (44 papers), Genetic and phenotypic traits in livestock (19 papers) and Genomics and Phylogenetic Studies (15 papers). Karim Gharbi is often cited by papers focused on Genetic diversity and population structure (44 papers), Genetic and phenotypic traits in livestock (19 papers) and Genomics and Phylogenetic Studies (15 papers). Karim Gharbi collaborates with scholars based in United Kingdom, France and Canada. Karim Gharbi's co-authors include Roy G. Danzmann, Timothée Cezard, John B. Taggart, Mark Blaxter, Moira M. Ferguson, Ross D. Houston, Michaël Bekaert, Arnaud Estoup, Bjørn Høyheim and A. E. Tinch and has published in prestigious journals such as SHILAP Revista de lepidopterología, Bioinformatics and PLoS ONE.

In The Last Decade

Karim Gharbi

95 papers receiving 5.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

How many biological replicates are needed in an RNA-seq experiment and which differential expression tool should you use?

2016 556 citations Karim Gharbi, Mark Blaxter et al. profile →

Peers

Countries citing papers authored by Karim Gharbi

Since Specialization

Citations

This map shows the geographic impact of Karim Gharbi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Karim Gharbi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Karim Gharbi more than expected).

Fields of papers citing papers by Karim Gharbi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Karim Gharbi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Karim Gharbi. The network helps show where Karim Gharbi may publish in the future.

Co-authorship network of co-authors of Karim Gharbi

This figure shows the co-authorship network connecting the top 25 collaborators of Karim Gharbi. A scholar is included among the top collaborators of Karim Gharbi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Karim Gharbi. Karim Gharbi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Different waves of postglacial recolonisation and genomic structure of bank vole populations in NE Poland 2023 ·Heredity ·Magdalena Niedziałkowska, (unknown), Wiesław Babik, Mateusz Konczal, Karim Gharbi, Timothée Cezard, Bogumiła Jędrzejewska	1
2	Identification of a non-canonical ciliate nuclear genetic code where UAA and UAG code for different amino acids 2023 ·PLoS Genetics ·Jamie McGowan, Estelle Kilias, Elisabet Alacid, James Lipscombe, (unknown), Karim Gharbi, Gemy Kaithakottil, Iain C. Macaulay, Seanna McTaggart, (unknown), Thomas A. Richards, Neil Hall, David Swarbreck	8
3	Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes 2022 ·BMC Genomics ·David J. Wright, Nicola Hall, (unknown), Angela Man, (unknown), Arne W. Mould, Alejandro De Los Angeles, Emily Angiolini, David Swarbreck, Karim Gharbi, Elizabeth M. Tunbridge, Wilfried Haerty	21
4	First large‐scale quantification study of DNA preservation in insects from natural history collections using genome‐wide sequencing 2022 ·Methods in Ecology and Evolution ·Victoria E. Mullin, (unknown), Andres Arce, Will Nash, (unknown), David G. Notton, (unknown), (unknown), Karim Gharbi, (unknown), (unknown), (unknown), Simon K. Jackson, (unknown), Christopher B. Watkins, Wilfried Haerty, Jeff Ollerton, Selina Brace, Richard J. Gill, Ian Barnes	12
5	MolluscDB: a genome and transcriptome database for molluscs 2021 ·Philosophical Transactions of the Royal Society B Biological Sciences ·(unknown), Dominik R. Laetsch, Richard Challis, Sujai Kumar, Karim Gharbi, Mark Blaxter	22
6	The Laboratory Domestication of Zebrafish: From Diverse Populations to Inbred Substrains 2019 ·Molecular Biology and Evolution ·Jaanus Suurväli, Andrew R. Whiteley, Yichen Zheng, Karim Gharbi, Maria Leptin, Thomas Wiehe	29
7	Inter and Intraspecific Genomic Divergence in Drosophila montana Shows Evidence for Cold Adaptation 2018 ·Genome Biology and Evolution ·Darren J. Parker, R. Axel W. Wiberg, Urmi Trivedi, Venera Tyukmaeva, Karim Gharbi, Roger K. Butlin, Anneli Hoikkala, Maaria Kankare, Michael G. Ritchie	21
8	Maintaining their genetic distance: Little evidence for introgression between widely hybridizing species of Geum with contrasting mating systems 2017 ·Molecular Ecology ·Crispin Y. Jordan, Konrad Lohse, Frances Turner, Marian Thomson, Karim Gharbi, Richard A. Ennos	16
9	Deciphering the demographic history of allochronic differentiation in the pine processionary moth Thaumetopoea pityocampa 2017 ·Molecular Ecology ·Raphaël Leblois, Mathieu Gautier, (unknown), (unknown), Christian Burban, Maxime Galan, Anne Loiseau, Laure Sauné, Manuela Branco, Karim Gharbi, Renaud Vitalis, Carole Kerdelhué	19
10	Maternal inheritance of deltamethrin resistance in the salmon louse Lepeophtheirus salmonis (Krøyer) is associated with unique mtDNA haplotypes 2017 ·PLoS ONE ·Greta Carmona‐Antoñanzas, Michaël Bekaert, (unknown), (unknown), William Roy, David I. Bassett, Ross D. Houston, Karim Gharbi, James E. Bron, Armin Sturm	26
11	Genomic prediction of host resistance to sea lice in farmed Atlantic salmon populations 2016 ·Genetics Selection Evolution ·Hsin‐Yuan Tsai, Alastair Hamilton, A. E. Tinch, D. R. Guy, James E. Bron, John B. Taggart, Karim Gharbi, M.J. Stear, Oswald Matika, Ricardo Pong‐Wong, Steve Bishop, Ross D. Houston	166
12	Development and validation of a mixed-tissue oligonucleotide DNA microarray for Atlantic bluefin tuna, Thunnus thynnus (Linnaeus, 1758) 2015 ·BMC Genomics ·Željka Trumbić, Michaël Bekaert, John B. Taggart, James E. Bron, Karim Gharbi, Ivona Mladineo	8
13	poRe: an R package for the visualization and analysis of nanopore sequencing data 2014 ·Bioinformatics ·Mick Watson, Marian Thomson, Judith Risse, Richard Talbot, Javier Santoyo‐López, Karim Gharbi, Mark Blaxter	55
14	Rapid Convergent Evolution in Wild Crickets 2014 ·Current Biology ·Sónia Pascoal, Timothée Cezard, (unknown), Karim Gharbi, (unknown), Elizabeth Payne, Michael G. Ritchie, Marlene Zuk, Nathan W. Bailey	99
15	Correction: Mapping and Validation of the Major Sex-Determining Region in Nile Tilapia ( L.) Using RAD Sequencing. 2013 ·PLoS ONE ·Christos Palaiokostas, Michaël Bekaert, (unknown), (unknown), Karim Gharbi, (unknown), (unknown)	2
16	Special features ofRADSequencing data: implications for genotyping 2012 ·Molecular Ecology ·John W. Davey, Timothée Cezard, Pablo Fuentes‐Utrilla, Cathlene Eland, Karim Gharbi, Mark Blaxter	267
17	Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon 2012 ·BMC Genomics ·Ross D. Houston, John W. Davey, Stephen Bishop, Natalie R Lowe, J. Mota-Velasco, Alastair Hamilton, D. R. Guy, A. E. Tinch, Marian Thomson, Mark Blaxter, Karim Gharbi, James E. Bron, John B. Taggart	98
18	Characterization of Na, K-ATPase genes in Atlantic salmon (Salmo salar) and comparative genomic organization with rainbow trout (Oncorhynchus mykiss) 2005 ·Molecular Genetics and Genomics ·Karim Gharbi, Moira M. Ferguson, Roy G. Danzmann	28
19	Comparative mapping of expressed sequence tags containing microsatellites in rainbow trout (Oncorhynchus mykiss) 2005 ·BMC Genomics ·Caird E. Rexroad, María Fernanda Rodríguez, Issa Coulibaly, Karim Gharbi, Roy G. Danzmann, Jenefer DeKoning, Ruth Phillips, Yniv Palti	49
20	Comparative Genome Analysis of the Primary Sex-Determining Locus in Salmonid Fishes 2003 ·Genome Research ·Rachael A. Woram, Karim Gharbi, Takashi Sakamoto, Bjørn Høyheim, Lars‐Erik Holm, Kerry A. Naish, Colin McGowan, Moira M. Ferguson, Ruth B. Phillips, (unknown), René Guyomard, Margaret Cairney, John B. Taggart, Richard Powell, William S. Davidson, Roy G. Danzmann	180

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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