Junjie Chen

6.0k total citations · 1 hit paper
147 papers, 3.6k citations indexed

About

Junjie Chen is a scholar working on Molecular Biology, Artificial Intelligence and Information Systems. According to data from OpenAlex, Junjie Chen has authored 147 papers receiving a total of 3.6k indexed citations (citations by other indexed papers that have themselves been cited), including 55 papers in Molecular Biology, 29 papers in Artificial Intelligence and 17 papers in Information Systems. Recurrent topics in Junjie Chen's work include Machine Learning in Bioinformatics (21 papers), Genomics and Phylogenetic Studies (12 papers) and MicroRNA in disease regulation (9 papers). Junjie Chen is often cited by papers focused on Machine Learning in Bioinformatics (21 papers), Genomics and Phylogenetic Studies (12 papers) and MicroRNA in disease regulation (9 papers). Junjie Chen collaborates with scholars based in China, United States and Hong Kong. Junjie Chen's co-authors include Bin Liu, Xiaolong Wang, Kuo‐Chen Chou, Fule Liu, Longyun Fang, Mingyue Guo, Deepika Walpita, Fergus J. Couch, Terry Ashley and David M. Livingston and has published in prestigious journals such as Physical Review Letters, Nucleic Acids Research and Circulation.

In The Last Decade

Junjie Chen

131 papers receiving 3.5k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

2015 651 citations Bin Liu, Fule Liu et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Junjie Chen China	24	2.6k	456	439	295	175	147	3.6k
Vivien Marx United States	26	2.0k 0.8×	245 0.5×	309 0.7×	217 0.7×	209 1.2×	180	3.7k
Sven Rahmann Germany	31	2.9k 1.1×	528 1.2×	508 1.2×	272 0.9×	268 1.5×	132	4.3k
Leonid Peshkin United States	24	3.4k 1.3×	251 0.6×	601 1.4×	425 1.4×	341 1.9×	69	4.9k
Joshua W. K. Ho Australia	36	2.6k 1.0×	358 0.8×	452 1.0×	357 1.2×	312 1.8×	141	4.4k
Mehmet Koyutürk United States	30	1.7k 0.6×	245 0.5×	180 0.4×	307 1.0×	92 0.5×	122	2.7k
Casey S. Greene United States	38	2.8k 1.0×	787 1.7×	457 1.0×	699 2.4×	219 1.3×	144	4.9k
Bruce A. Shapiro United States	48	5.5k 2.1×	467 1.0×	490 1.1×	366 1.2×	186 1.1×	178	7.1k
Babak Alipanahi Canada	15	2.7k 1.0×	451 1.0×	400 0.9×	424 1.4×	51 0.3×	30	3.8k
Ivan G. Costa Germany	39	3.0k 1.1×	327 0.7×	672 1.5×	634 2.1×	328 1.9×	124	4.9k

Countries citing papers authored by Junjie Chen

Since Specialization

Citations

This map shows the geographic impact of Junjie Chen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Junjie Chen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Junjie Chen more than expected).

Fields of papers citing papers by Junjie Chen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Junjie Chen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Junjie Chen. The network helps show where Junjie Chen may publish in the future.

Co-authorship network of co-authors of Junjie Chen

This figure shows the co-authorship network connecting the top 25 collaborators of Junjie Chen. A scholar is included among the top collaborators of Junjie Chen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Junjie Chen. Junjie Chen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Zhao, Ying, et al.. (2025). HiPHD: Hierarchical Classification for Protein Remote Homology Detection by Incorporating Protein Sequential and Structural Information. PubMed. 22(6). 2872–2881.

Dong, Zhiming, Weisheng Lu, & Junjie Chen. (2024). Neural rendering-based semantic point cloud retrieval for indoor construction progress monitoring. Automation in Construction. 164. 105448–105448. 5 indexed citations

Li, Jin, Junjie Chen, Xiaosa Xu, et al.. (2024). Enhanced Interphase Ion Transport via Charge‐Rich Space Charge Layers for Ultra‐Stable Solid‐State Lithium Metal Batteries. Advanced Energy Materials. 15(1). 20 indexed citations

Chen, Junjie, et al.. (2024). Topological properties and skin effects modulated by different-density nonreciprocal couplings in the Su-Schrieffer-Heeger structure. Chinese Journal of Physics. 89. 1654–1668.

Liu, Hui, Junjie Chen, Zhanglin Chen, et al.. (2024). Modulating trap properties by Cr3+-doping in Zn2SiO4: Mn2+ nano phosphor for optical information storage. Ceramics International. 50(21). 43373–43382. 4 indexed citations

Chen, Junjie, et al.. (2024). ProFun-SOM: Protein Function Prediction for Specific Ontology Based on Multiple Sequence Alignment Reconstruction. IEEE Transactions on Neural Networks and Learning Systems. 36(5). 8060–8071. 3 indexed citations

Yu, Li, Jiaheng Zhang, Junjie Chen, et al.. (2023). Privacy-Preserving Physical-Layer Authentication Under Cooperative Attacks. IEEE/ACM Transactions on Networking. 32(2). 1171–1186. 2 indexed citations

Wang, Junyan, et al.. (2023). Accurate Full-Dimensional Global Diabatic Potential Energy Matrix for the Two Lowest-Lying Electronic States of the H + O₂ ↔ HO + O Reaction. Journal of Chemical Theory and Computation. 19(10). 2929–2938. 8 indexed citations

Guo, Mingyue, et al.. (2023). CFAGO: cross-fusion of network and attributes based on attention mechanism for protein function prediction. Bioinformatics. 39(3). 18 indexed citations

10.

Li, Jia-Hao, et al.. (2023). iEnhancer-ELM: improve enhancer identification by extracting position-related multiscale contextual information based on enhancer language models. Bioinformatics Advances. 3(1). vbad043–vbad043. 13 indexed citations

11.

Zhang, Dong, Jingjia Zhang, Pengfei Wu, et al.. (2022). Optimized Sequencing Adaptors Enable Rapid and Real-Time Metagenomic Identification of Pathogens during Runtime of Sequencing. Clinical Chemistry. 68(6). 826–836. 11 indexed citations

12.

Chen, Junjie, et al.. (2022). LncRNA NONRATT009773.2 promotes bone cancer pain progression through the miR‐708‐5p/CXCL13 axis. European Journal of Neuroscience. 55(3). 661–674. 8 indexed citations

13.

Chen, Junjie, et al.. (2021). An Improved StarGAN for Emotional Voice Conversion: Enhancing Voice Quality and Data Augmentation. OPUS (Augsburg University). 821–825. 8 indexed citations

14.

Hu, Baotian, Yang Xiang, Xiaolong Wang, et al.. (2021). A BERT-Based Generation Model to Transform Medical Texts to SQL Queries for Electronic Medical Records: Model Development and Validation. JMIR Medical Informatics. 9(12). e32698–e32698. 10 indexed citations

15.

Chen, Junjie & Xinghua Shi. (2019). Sparse Convolutional Denoising Autoencoders for Genotype Imputation. Genes. 10(9). 652–652. 22 indexed citations

16.

Liu, Bin, Junjie Chen, Mingyue Guo, & Xiaolong Wang. (2017). Protein Remote Homology Detection and Fold Recognition Based on Sequence-Order Frequency Matrix. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 16(1). 292–300. 18 indexed citations

17.

Liu, Bin, Longyun Fang, Junjie Chen, Fule Liu, & Xiaolong Wang. (2015). miRNA-dis: microRNA precursor identification based on distance structure status pairs. Molecular BioSystems. 11(4). 1194–1204. 62 indexed citations

18.

Chen, Junjie. (2013). Improved outlier detection algorithm based on difference between nearest neighbors distance. Jisuanji gongcheng yu sheji. 1 indexed citations

19.

Ching, James Kain, et al.. (2013). Abstract 14285: Rapamycin Nanoparticles Potently Induce Cardiac Autophagy and Improve Ventricular Function in 18-month Old mdx Mice, The Animal Model of Duchenne Muscular Dystrophy. Circulation. 1 indexed citations

20.

Guo, Tao, et al.. (2012). The Research on Personalized VM Deployment Mechanism in Cloud. 43(2). 123–125. 1 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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