Jason Liu

9.5k citations

37 papers · 2.2k indexed · 1 hit paper · h-index 14

Co-authors: Myle Ott Zeming Lin Jerry Ma C. Lawrence Zitnick Rob Fergus Siddharth Goyal Demi Guo Alexander Rives
Topics: Genomics and Chromatin Dynamics (7 papers)Single-cell and spatial transcriptomics (5 papers)RNA and protein synthesis mechanisms (5 papers)
Cited by: Aging Molecular Biology Computational Theory and Mathematics
Journals: Proceedings of the National Academy of Sciences Journal of Biological Chemistry Nature Communications
Partner nations: United States United Kingdom Canada

In The Last Decade

Jason Liu

34 papers receiving 2.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences

2021 1.4k citations Alexander Rives, Joshua Meier et al. Proceedings of the National Academy of Sciences profile →

Peers

Countries citing papers authored by Jason Liu

Since Specialization

Citations

This map shows the geographic impact of Jason Liu's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jason Liu with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jason Liu more than expected).

Fields of papers citing papers by Jason Liu

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jason Liu. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jason Liu. The network helps show where Jason Liu may publish in the future.

Co-authorship network of co-authors of Jason Liu

This figure shows the co-authorship network connecting the top 25 collaborators of Jason Liu. A scholar is included among the top collaborators of Jason Liu based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jason Liu. Jason Liu is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Effects of Oral Contraceptive Pills on Brain Networks: A Conceptual Replication and Extension 2025 ·Human Brain Mapping ·(unknown),Jason Liu,Timothy R. Jordan,Andrea J. Rapkin,Edythe D. London,Nicole Petersen	0
2	College Community–Based Physical Activity Support at a Public University During the COVID-19 Pandemic: Retrospective Longitudinal Analysis of Intra- Versus Interpersonal Components for Uptake and Outcome Association 2025 ·JMIR mhealth and uhealth ·Garrett I. Ash,Selene Mak,(unknown),(unknown),(unknown),Robert S. Axtell,Beatrice Borsari,Jason Liu,Shaoke Lou,(unknown),Lisa M. Fucito,Sangchoon Jeon,Matthew Stults‐Kolehmainen,Mark Gerstein	0
3	A map of enhancer regions in primary human neural progenitor cells using capture STARR-seq 2025 ·Genome Research ·(unknown),Lijun Cheng,(unknown),Jason Liu,Gaoyuan Wang,(unknown),Qiuyu Guo,Le Qi,(unknown),(unknown),Ahyeon Hwang,Mengting Gu,(unknown),Yuhang Chen,Jennifer Moran,Jing Zhang,Donghoon Lee,Mark Gerstein,Daniel H. Geschwind,Kevin P. White	1
4	Novel CRISPR-Associated Gene-Editing Systems Discovered in Metagenomic Samples Enable Efficient and Specific Genome Engineering 2023 ·The CRISPR Journal ·Rebecca Lamothe,(unknown),Diego A. Espinosa,Rachel M. Rudlaff,Patrick Browne,Jason Liu,(unknown),Audra E. Devoto,Jennifer Oki,(unknown),Daniela S. Aliaga Goltsman,Jyun‐Liang Lin,Cristina N. Butterfield,Christopher T. Brown,Brian C. Thomas,Gregory J. Cost	6
5	Forest Fire Clustering for single-cell sequencing combines iterative label propagation with parallelized Monte Carlo simulations 2022 ·Nature Communications ·(unknown),(unknown),(unknown),Jason Liu,Jing Zhang,Mark Gerstein	7
6	SCAN-ATAC-Sim: a scalable and efficient method for simulating single-cell ATAC-seq data from bulk-tissue experiments 2021 ·Bioinformatics ·(unknown),Jing Zhang,Jason Liu,Zixuan Zhang,(unknown),Donghoon Lee,Min Xu,Mark Gerstein	7
7	DECODE: a De ep-learning framework for Co n de nsing enhancers and refining boundaries with large-scale functional assays 2021 ·Bioinformatics ·(unknown),Jing Zhang,Jason Liu,Yi Dai,Donghoon Lee,Martin Renqiang Min,Min Xu,Mark Gerstein	8
8	Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequencesbreakdown → 2021 ·Proceedings of the National Academy of Sciences ·Alexander Rives,Joshua Meier,Tom Sercu,Siddharth Goyal,Zeming Lin,Jason Liu,Demi Guo,Myle Ott,C. Lawrence Zitnick,Jerry Ma,Rob Fergus	1429
9	Cellphone enabled point-of-care assessment of breast tumor cytology and molecular HER2 expression from fine-needle aspirates 2021 ·npj Breast Cancer ·Daniel Y. Joh,Jacob T. Heggestad,Shengwei Zhang,Grace R. Anderson,Jayanta Bhattacharyya,Suzanne E. Wardell,(unknown),(unknown),(unknown),Jason Liu,Sachiko M. Oshima,Angus Hucknall,Terry Hyslop,Allison Hall,Kris C. Wood,E. Shelley Hwang,Kyle C. Strickland,Qingshan Wei,Ashutosh Chilkoti	12
10	Bayesian structural time series for biomedical sensor data: A flexible modeling framework for evaluating interventions 2021 ·PLoS Computational Biology ·Jason Liu,Daniel Spakowicz,Garrett I. Ash,Rebecca Hoyd,(unknown),(unknown),Shaoke Lou,Donghoon Lee,Jing Zhang,Carolyn J. Presley,(unknown),Matthew Stults‐Kolehmainen,Laura M. Nally,Julien S. Baker,Lisa M. Fucito,Stuart A. Weinzimer,Andrew V. Papachristos,Mark Gerstein	15
11	TopicNet: a framework for measuring transcriptional regulatory network change 2020 ·Bioinformatics ·Shaoke Lou,Tianxiao Li,Xiangmeng Kong,Jing Zhang,Jason Liu,Donghoon Lee,Mark Gerstein	18
12	Novel Type V-A CRISPR Effectors Are Active Nucleases with Expanded Targeting Capabilities 2020 ·The CRISPR Journal ·Daniela S. Aliaga Goltsman,Lisa Alexander,Audra E. Devoto,(unknown),Jason Liu,Cristina N. Butterfield,Christopher T. Brown,Brian C. Thomas	8
13	Epigenome-based splicing prediction using a recurrent neural network 2020 ·PLoS Computational Biology ·Donghoon Lee,Jing Zhang,Jason Liu,Mark Gerstein	20
14	STARRPeaker: uniform processing and accurate identification of STARR-seq active regions 2020 ·Genome biology ·Donghoon Lee,(unknown),Jennifer Moran,(unknown),Jing Zhang,Jason Liu,Dominic Fitzgerald,Yasuhiro Kyono,Lijia Ma,Kevin P. White,Mark Gerstein	35
15	GRAM: A GeneRAlized Model to predict the molecular effect of a non-coding variant in a cell-type specific manner 2019 ·PLoS Genetics ·Shaoke Lou,(unknown),Tianxiao Li,Jin Liang,Hussein Mohsen,Jason Liu,Jing Zhang,Sandra Cohen,Jinrui Xu,Haiyuan Yu,Mark A. Rubin,Mark Gerstein	4
16	Dissecting Cellulase Hypersecretion in Neurospora crassa 2017 ·eScholarship (California Digital Library) ·Jason Liu	0
17	BD750, a benzothiazole derivative, inhibits T cell proliferation by affecting the JAK3/STAT5 signalling pathway 2012 ·British Journal of Pharmacology ·(unknown),(unknown),Hecheng Li,(unknown),Jason Liu,Yantang Wang,(unknown),Jie Zheng,(unknown),Yu‐Hung Lai,Pan‐Chyr Yang,(unknown),(unknown)	22
18	Analyses of C. elegans Fat Metabolic Pathways 2012 ·Methods in cell biology ·(unknown),Jason Liu,George A. Lemieux,Brendan Mullaney,Kaveh Ashrafi	33
19	Mechanical Strain Induces pp60 Activation and Translocation to Cytoskeleton in Fetal Rat Lung Cells 1996 ·Journal of Biological Chemistry ·Mingyao Liu,Yi Qin,Jason Liu,A. Keith Tanswell,Martin Post	113
20	Fetal Lung Fibroblasts Selectively Down-regulate Proteoglycan Synthesis in Response to Elevated Oxygen 1996 ·Journal of Biological Chemistry ·Isabella Caniggia,Jason Liu,Maciej Kuliszewski,A. Keith Tanswell,Martin Post	11

About Jason Liu

Jason Liu is a scholar working on Aging, Molecular Biology and Biophysics, having authored 37 papers that have together received 2.2k indexed citations. Recurring topics across this work include Genomics and Chromatin Dynamics (7 papers), Single-cell and spatial transcriptomics (5 papers) and RNA and protein synthesis mechanisms (5 papers). The work is most often cited by research in Aging (111 citations), Molecular Biology (1.6k citations) and Computational Theory and Mathematics (249 citations). Jason Liu has collaborated with scholars based in United States, United Kingdom and Canada. Frequent co-authors include Myle Ott, Zeming Lin, Jerry Ma, C. Lawrence Zitnick, Rob Fergus, Siddharth Goyal, Demi Guo, Alexander Rives, Tom Sercu and Joshua Meier. Their work appears in journals such as Proceedings of the National Academy of Sciences, Journal of Biological Chemistry and Nature Communications.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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