Jacob Köhler

1.9k total citations · 1 hit paper
16 papers, 1.1k citations indexed

About

Jacob Köhler is a scholar working on Molecular Biology, Artificial Intelligence and Information Systems and Management. According to data from OpenAlex, Jacob Köhler has authored 16 papers receiving a total of 1.1k indexed citations (citations by other indexed papers that have themselves been cited), including 15 papers in Molecular Biology, 8 papers in Artificial Intelligence and 4 papers in Information Systems and Management. Recurrent topics in Jacob Köhler's work include Biomedical Text Mining and Ontologies (9 papers), Semantic Web and Ontologies (8 papers) and Bioinformatics and Genomic Networks (7 papers). Jacob Köhler is often cited by papers focused on Biomedical Text Mining and Ontologies (9 papers), Semantic Web and Ontologies (8 papers) and Bioinformatics and Genomic Networks (7 papers). Jacob Köhler collaborates with scholars based in Germany, United Kingdom and United States. Jacob Köhler's co-authors include Stephan Philippi, Barry Smith, Cornelius Rosse, Werner Ceusters, Chris Mungall, Jane Lomax, Anand Kumar, Fabian Neuhaus, Bert R. E. Klagges and Alan Rector and has published in prestigious journals such as Bioinformatics, Nature Reviews Genetics and Genome biology.

In The Last Decade

Jacob Köhler

16 papers receiving 1.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Relations in biomedical ontologies

2005 653 citations Barry Smith, Werner Ceusters et al. Genome biology profile →

Peers

Jacob Köhler

MB

AI

IS

ISM

GENET

Fabian Neuhaus Germany

Csongor Nyulas United States

Clément Jonquet France

William Bug United States

Pierre Grenon United Kingdom

Martin Romacker Germany

Yuka Tateisi Japan

Susanne M. Humphrey United States

Carlo Torniai United States

Heinrich Herre Germany

Fabian Neuhaus Germany

Jacob Köhler

706 ×0.7

MB

584 ×0.9

AI

94 ×0.8

IS

51 ×0.5

ISM

65 ×0.7

GENET

Citations per year, relative to Jacob Köhler Jacob Köhler (= 1×) peers Fabian Neuhaus

Countries citing papers authored by Jacob Köhler

Since Specialization

Citations

This map shows the geographic impact of Jacob Köhler's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jacob Köhler with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jacob Köhler more than expected).

Fields of papers citing papers by Jacob Köhler

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jacob Köhler. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jacob Köhler. The network helps show where Jacob Köhler may publish in the future.

Co-authorship network of co-authors of Jacob Köhler

This figure shows the co-authorship network connecting the top 25 collaborators of Jacob Köhler. A scholar is included among the top collaborators of Jacob Köhler based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jacob Köhler. Jacob Köhler is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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16 of 16 papers shown

1.

Lysenko, Artem, Matthew Hindle, Keywan Hassani‐Pak, et al.. (2008). Graph-based sequence annotation using a data integration approach. PubMed. 5(2). 3 indexed citations

2.

Taubert, Jan, Matthew Hindle, Rainer Winnenburg, et al.. (2007). The OXL format for the exchange of integrated datasets. Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics. 4(3). 27–40. 12 indexed citations

3.

Köhler, Jacob, et al.. (2006). Quality control for terms and definitions in ontologies and taxonomies. BMC Bioinformatics. 7(1). 212–212. 39 indexed citations

4.

Philippi, Stephan & Jacob Köhler. (2006). Automated Structure Extraction and XML Conversion of Life Science Database Flat Files. IEEE Transactions on Information Technology in Biomedicine. 10(4). 714–721. 1 indexed citations

5.

Philippi, Stephan & Jacob Köhler. (2006). Addressing the problems with life-science databases for traditional uses and systems biology. Nature Reviews Genetics. 7(6). 482–488. 61 indexed citations

6.

Köhler, Jacob, Jan Baumbach, Jan Taubert, et al.. (2006). Graph-based analysis and visualization of experimental results with ONDEX. Bioinformatics. 22(11). 1383–1390. 139 indexed citations

7.

Köhler, Jacob, et al.. (2006). Ontology based text indexing and querying for the semantic web. Knowledge-Based Systems. 19(8). 744–754. 62 indexed citations

8.

Smith, Barry, Werner Ceusters, Bert R. E. Klagges, et al.. (2005). Relations in biomedical ontologies. Genome biology. 6(5). R46–R46. 653 indexed citations breakdown →

9.

Skusa, Andre, et al.. (2005). Extraction of biological interaction networks from scientific literature. Briefings in Bioinformatics. 6(3). 263–276. 37 indexed citations

10.

Philippi, Stephan & Jacob Köhler. (2004). Using XML Technology for the Ontology-Based Semantic Integration of Life Science Databases. IEEE Transactions on Information Technology in Biomedicine. 8(2). 154–160. 22 indexed citations

11.

Köhler, Jacob. (2004). Integration of life science databases. 2(2). 61–69. 15 indexed citations

12.

Köhler, Jacob, et al.. (2004). Proceedings of DILS 2004 (Data Integration in the Life Sciences), (Lecture Notes in Bioinformatics 2994). 2 indexed citations

13.

Köhler, Jacob, Stephan Philippi, & Matthias Lange. (2003). SEMEDA: ontology based semantic integration of biological databases. Bioinformatics. 19(18). 2420–2427. 67 indexed citations

14.

Chen, Ming, et al.. (2002). The biology Petri net markup language.. 150–161. 5 indexed citations

15.

Köhler, Jacob, Matthias Lange, Ralf Hofestädt, & Steffen Schulze-Kremer. (2002). Logical and semantic database integration. 37. 77–80. 8 indexed citations

16.

Köhler, Jacob & Steffen Schulze-Kremer. (2002). The semantic metadatabase (SEMEDA): ontology based integration of federated molecular biological data sources.. PubMed. 2(3). 219–31. 2 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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