Florian Jupe

3.3k citations

17 papers · 1.6k indexed · h-index 16

Impact in

Plant Science top 2%
- Plant-Microbe Interactions and Immunity
- Plant Disease Resistance and Genetics
- Plant Pathogens and Resistance
- Plant Virus Research Studies
- Plant Pathogenic Bacteria Studies
- Chromosomal and Genetic Variations
Horticulture top 10%

Papers in

Plant Science 16
- Plant-Microbe Interactions and Immunity 11
- Plant Disease Resistance and Genetics 8
- Plant Pathogens and Resistance 7
- Plant Pathogenic Bacteria Studies 3
- Legume Nitrogen Fixing Symbiosis 2
- Chromosomal and Genetic Variations 2
- Plant Virus Research Studies 2
Cell Biology 3
- Plant Pathogens and Fungal Diseases 3

Co-authors: Jonathan D. G. Jones Kamil Witek Graham Etherington Ingo Hein Glenn J. Bryan Leighton Pritchard Peter Cock Matthew D. Clark
Journals: Theoretical and Applied Genetics (1 paper)PLoS Genetics (1 paper)Molecular Plant Pathology (1 paper)Nature Communications (1 paper)Bioinformatics (1 paper)
Partner nations: United Kingdom United States Germany

In The Last Decade

Florian Jupe

17 papers receiving 1.5k citations

Peers

Countries citing papers authored by Florian Jupe

Since Specialization

Citations

This map shows the geographic impact of Florian Jupe's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Florian Jupe with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Florian Jupe more than expected).

Fields of papers citing papers by Florian Jupe

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Florian Jupe. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Florian Jupe. The network helps show where Florian Jupe may publish in the future.

Co-authors

The 25 scholars most cited alongside Florian Jupe, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Florian Jupe Line = papers co-authored together Florian Jupe links everyone, so they are left out of the graph.

All Works

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17 of 17 papers shown

#	Work
1	Identification of Avramr1 from Phytophthora infestans using long read and cDNA pathogen‐enrichment sequencing (PenSeq) Molecular Plant Pathology ·Xiao Lin, Tianqiao Song, 賢二小山, Kamil Witek, Agathe Jouet, Florian Jupe, Agnieszka Witek, Hari S. Karki, Vivianne G. A. A. Vleeshouwers, Ingo Hein, Jonathan D. G. Jones	2020	24
2	Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control Genome Research ·Todd P. Michael, Evan Ernst, Nolan T. Hartwick, Philomena Chu, Douglas W. Bryant, Sarah Gilbert, Stefan Ortleb, Erin Baggs, K. Sowjanya Sree, Klaus‐J. Appenroth, Jörg Fuchs, Florian Jupe, Justin P. Sandoval, Ksenia V. Krasileva, Diangui Zhou, Todd C. Mockler, Joseph R. Ecker, Robert A. Martienssen, Eric Lam	2020	53
3	The complex architecture and epigenomic impact of plant T-DNA insertions PLoS Genetics ·Florian Jupe, Angeline Rivkin, Todd P. Michael, Mark Zander, S. Timothy Motley, Justin P. Sandoval, R. Keith Slotkin, Huaming Chen, Rosa Castanon, Joseph R. Nery, Joseph R. Ecker	2019	114
4	Epigenetic silencing of a multifunctional plant stress regulator eLife ·Mark Zander, Björn C. Willige, Yupeng He, Thu Anh Nguyen, Ishmael Qawiy, Lore Eggermont, Elizabeth D. Howell, Robert B. McGrath, Anna Bartlett, Rosa Castanon, Joseph R. Nery, Huaming Chen, Zhuzhu Zhang, Florian Jupe, Anna N. Stepanova, Robert J. Schmitz, Mathew G. Lewsey, Joanne Chory, Joseph R. Ecker	2019	39
5	Albugo candida race diversity, ploidy and host‐associated microbes revealed using DNA sequence capture on diseased plants in the field New Phytologist ·Agathe Jouet, Diane G. O. Saunders, Mark McMullan, Ben J. Ward, Oliver J. Furzer, Florian Jupe, Volkan Çevik, Ingo Hein, Gaëtan Thilliez, Eric B. Holub, Cock van Oosterhout, Jonathan D. G. Jones	2018	30
6	High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell Nature Communications ·Todd P. Michael, Florian Jupe, Felix Bemm, S. Timothy Motley, Justin P. Sandoval, Christa Lanz, Olivier Loudet, Detlef Weigel, Joseph R. Ecker	2018	190
7	Identification and rapid mapping of a gene conferring broad-spectrum late blight resistance in the diploid potato species Solanum verrucosum through DNA capture technologies Theoretical and Applied Genetics ·Xinwei Chen, Dominika Lewandowska, Miles R. Armstrong, Katie Baker, Hans Morgenstern, Micha Bayer, Brian Harrower, Karen McLean, Florian Jupe, Kamil Witek, A. K. Lees, Jonathan D. G. Jones, Glenn J. Bryan, Ingo Hein	2018	44
8	Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing Nature Biotechnology ·Kamil Witek, Florian Jupe, Agnieszka Witek, David Baker, Matthew D. Clark, Jonathan D. G. Jones	2016	201
9	SMRT RenSeq protocol Protocol Exchange ·Kamil Witek, Florian Jupe, Agnieszka Witek, David E. Baker, Matthew D. Clark, Jonathan D. G. Jones	2016	4
10	Targeted Capture and Sequencing of Gene-Sized DNA Molecules BioTechniques ·Michael Giolai, Pirita Paajanen, Walter Verweij, Lawrence Percival‐Alwyn, David Baker, Kamil Witek, Florian Jupe, Glenn J. Bryan, Ingo Hein, Jonathan D. G. Jones, Matthew D. Clark	2016	27
11	NLR-parser: rapid annotation of plant NLR complements Bioinformatics ·Burkhard Steuernagel, Florian Jupe, Kamil Witek, Jonathan D. G. Jones, Brande B. H. Wulff	2015	77
12	Genomic DNA Library Preparation for Resistance Gene Enrichment and Sequencing (RenSeq) in Plants Methods in molecular biology ·Florian Jupe, Xinwei Chen, Walter Verweij, M. Eckert, Jonathan D. G. Jones, Ingo Hein	2014	19
13	Hypersensitive response to Potato virus Y in potato cultivar Sárpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX Molecular Breeding ·H. Schmid-Sch�nbein, Florian Jupe, Ingo Hein, Waldemar Marczewski, Jadwiga Śliwka	2014	22
14	Elevating crop disease resistance with cloned genes Philosophical Transactions of the Royal Society B Biological Sciences ·Jonathan D. G. Jones, Kamil Witek, Walter Verweij, Florian Jupe, David E. L. Cooke, Stephen Dorling, Laurence Tomlinson, Matthew Smoker, Tania Reis Lichtenfels Ribeiro, Simon J. Foster	2014	80
15	Defining the full tomato NB-LRR resistance gene repertoire using genomic and cDNA RenSeq BMC Plant Biology ·Giuseppe Andolfo, Florian Jupe, Kamil Witek, Graham Etherington, Maria Raffaella Ercolano, Jonathan D. G. Jones	2014	120
16	Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB‐LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations The Plant Journal ·Florian Jupe, Kamil Witek, Walter Verweij, Jadwiga Śliwka, Leighton Pritchard, Graham Etherington, Dan MacLean, Peter Cock, Richard M. Leggett, Glenn J. Bryan, Linda Cardle, Ingo Hein, Jonathan D. G. Jones	2013	272
17	Identification and localisation of the NB-LRR gene family within the potato genome BMC Genomics ·Florian Jupe, Leighton Pritchard, Graham Etherington, Katrin Mackenzie, Peter Cock, Frank Wright, Sanjeev Sharma, Dan Bolser, Glenn J. Bryan, Jonathan D. G. Jones, Ingo Hein	2012	234

About Florian Jupe

Florian Jupe is a scholar working on Plant Science, Cell Biology, Molecular Biology, Ecology and Infectious Diseases, having authored 17 papers that have together received 1.6k indexed citations. Recurring topics across this work include Plant-Microbe Interactions and Immunity (11 papers), Plant Disease Resistance and Genetics (8 papers), Plant Pathogens and Resistance (7 papers), Plant Pathogenic Bacteria Studies (3 papers), Plant Pathogens and Fungal Diseases (3 papers), Legume Nitrogen Fixing Symbiosis (2 papers), Chromosomal and Genetic Variations (2 papers) and Plant Virus Research Studies (2 papers). The work is most often cited by research in Plant Science (1.3k citations), Horticulture (13 citations), Cell Biology (127 citations), Molecular Biology (533 citations) and Biotechnology (49 citations). Florian Jupe has collaborated with scholars based in United Kingdom, United States and Germany. Frequent co-authors include Jonathan D. G. Jones, Kamil Witek, Graham Etherington, Ingo Hein, Glenn J. Bryan, Leighton Pritchard, Peter Cock, Matthew D. Clark, David Baker and Joseph R. Ecker. Their work appears in journals such as Theoretical and Applied Genetics, PLoS Genetics, Molecular Plant Pathology, Nature Communications and Bioinformatics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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