Edward Y. Chen

9.8k citations

15 papers · 5.5k indexed · 1 hit paper · h-index 12

Impact in

Cancer Research top 2%
- Cancer-related molecular mechanisms research
- MicroRNA in disease regulation
Molecular Biology top 2%
- Bioinformatics and Genomic Networks
- Epigenetics and DNA Methylation
- RNA modifications and cancer
- RNA Research and Splicing
- Single-cell and spatial transcriptomics
- Gene expression and cancer classification

Papers in

Nephrology 3
- Renal Diseases and Glomerulopathies 3
Biophysics 2
- Cell Image Analysis Techniques 2

Co-authors: Avi Ma’ayan Qiaonan Duan Christopher M. Tan Neil R. Clark Yan Kou Gabriela Vaz Meirelles Zichen Wang Huilei Xu
Journals: BMC Bioinformatics (3 papers)Nature Medicine (2 papers)Bioinformatics (2 papers)Journal of the American Society of Nephrology (1 paper)Journal of Clinical Investigation (1 paper)
Partner nations: United States China Italy

In The Last Decade

Edward Y. Chen

15 papers receiving 5.4k citations

Hit Papers

align trajectories log scale

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool 2013 · 4.6k citations

Peers

Countries citing papers authored by Edward Y. Chen

Since Specialization

Citations

This map shows the geographic impact of Edward Y. Chen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Edward Y. Chen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Edward Y. Chen more than expected).

Fields of papers citing papers by Edward Y. Chen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Edward Y. Chen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Edward Y. Chen. The network helps show where Edward Y. Chen may publish in the future.

Co-authors

The 25 scholars most cited alongside Edward Y. Chen, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Edward Y. Chen Line = papers co-authored together Edward Y. Chen links everyone, so they are left out of the graph.

All Works

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15 of 15 papers shown

#	Work
1	Publisher Correction: A systems approach identifies HIPK2 as a key regulator of kidney fibrosis Nature Medicine ·Yuanmeng Jin, Deborah Pragier, Peter Y. Chuang, Ying Fan, Yifei Zhong, Jo Dysart, Amin R. Mazloom, Edward Y. Chen, Vivette D. D’Agati, Huabao Xiong, Michael J. Ross, Nan Chen, Avi Ma’ayan, John Cijiang He	2021	1
2	Krüppel-like factor 6 regulates mitochondrial function in the kidney Journal of Clinical Investigation ·Sandeep K. Mallipattu, Eugène . Auteur du texte Sauvage, Vivette D. D’Agati, Goutham Narla, Ruijie Liu, Michael A. Frohman, Kathleen G. Dickman, Edward Y. Chen, Avi Ma’ayan, Agnieszka B. Bialkowska, Amr M. Ghaleb, Mandayam O. Nandan, Mukesh K. Jain, Ilse S. Daehn, Peter Y. Chuang, Vincent W. Yang, John Cijiang He	2015	65
3	NetworkPainter: dynamic intracellular pathway animation in Cytobank BMC Bioinformatics ·Jonathan R. Karr, Harendra Guturu, Edward Y. Chen, Xingzheng Luo, Jonathan M. Irish, Nikesh Kotecha, Markus W. Covert	2015	3
4	The characteristic direction: a geometrical approach to identify differentially expressed genes BMC Bioinformatics ·Neil R. Clark, Kevin Hu, Salvatore Fava, Yan Kou, Edward Y. Chen, Qiaonan Duan, Avi Ma’ayan	2014	123
5	LINCS Canvas Browser: interactive web app to query, browse and interrogate LINCS L1000 gene expression signatures Nucleic Acids Research ·Qiaonan Duan, Jing Li, Mario Niepel, Marc Hafner, Jeremy L. Muhlich, Nicolas Fernandez, Andrew D. Rouillard, Christopher M. Tan, Edward Y. Chen, Todd R. Golub, Peter K. Sorger, Aravind Subramanian, Avi Ma’ayan	2014	209
6	B- myb is an essential regulator of hematopoietic stem cell and myeloid progenitor cell development Proceedings of the National Academy of Sciences ·Stacey J. Baker, Avi Ma’ayan, Yen K. Lieu, À Libourne, M. V. Ramana Reddy, Edward Y. Chen, Qiaonan Duan, Hans‐Willem Snoeck, E. Premkumar Reddy	2014	40
7	Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool BMC Bioinformatics ·Edward Y. Chen, Christopher M. Tan, Yan Kou, Qiaonan Duan, Zichen Wang, Gabriela Vaz Meirelles, Neil R. Clark, Avi Ma’ayan Hit paper breakdown →	2013	4574
8	Renoprotective Effect of Combined Inhibition of Angiotensin-Converting Enzyme and Histone Deacetylase Journal of the American Society of Nephrology ·Yifei Zhong, Edward Y. Chen, Ruijie Liu, Peter Y. Chuang, Sandeep K. Mallipattu, Christopher M. Tan, Neil R. Clark, Yueyi Deng, Paul E. Klotman, Avi Ma’ayan, John Cijiang He	2013	46
9	Network2Canvas: network visualization on a canvas with enrichment analysis Bioinformatics ·Christopher M. Tan, Edward Y. Chen, Ruth Dannenfelser, Neil R. Clark, Avi Ma’ayan	2013	27
10	ESCAPE: database for integrating high-content published data collected from human and mouse embryonic stem cells Database ·Huilei Xu, Caroline Baroukh, Ruth Dannenfelser, Edward Y. Chen, Christopher M. Tan, Yan Kou, Y.I. Kim, Ihor R. Lemischka, Avi Ma’ayan	2013	89
11	A systems approach identifies HIPK2 as a key regulator of kidney fibrosis Nature Medicine ·Yuanmeng Jin, Deborah Pragier, Peter Y. Chuang, Ying Fan, Yifei Zhong, Yan Dai, Amin R. Mazloom, Edward Y. Chen, Vivette D. D’Agati, Huabao Xiong, Michael J. Ross, Nan Chen, Avi Ma’ayan, John Cijiang He	2012	123
12	Transforming Growth Factor β Signaling Controls Activities of Human Intestinal CD8+T Suppressor Cells Gastroenterology ·Keren M. Rabinowitz, Yuanyuan Wang, Edward Y. Chen, L-M Chu, David Chiang, M. Cecilia Berin, Stéphanie Dahan, Damien Chaussabel, Avi Ma’ayan, Lloyd Mayer	2012	14
13	Expression2Kinases: mRNA profiling linked to multiple upstream regulatory layers Bioinformatics ·Edward Y. Chen, Huilei Xu, Simon Gordonov, Maribel P. Lim, Matthew H. Perkins, Avi Ma’ayan	2011	128
14	Audio Compression: Technology and Applications AT&T Technical Journal ·N. Jayant, Edward Y. Chen	1995	26
15	Synthesis of .alpha.,.beta.-cycloeudesmol The Journal of Organic Chemistry ·Robert A. Moss, Edward Y. Chen	1981	7

About Edward Y. Chen

Edward Y. Chen is a scholar working on Nephrology, Biophysics, Molecular Biology, Computational Theory and Mathematics and Genetics, having authored 15 papers that have together received 5.5k indexed citations. Recurring topics across this work include Gene Regulatory Network Analysis (5 papers), Bioinformatics and Genomic Networks (4 papers), Single-cell and spatial transcriptomics (3 papers), Renal Diseases and Glomerulopathies (3 papers), Cell Image Analysis Techniques (2 papers), Computational Drug Discovery Methods (2 papers), Gene expression and cancer classification (2 papers) and Genetic Syndromes and Imprinting (1 paper). The work is most often cited by research in Cancer Research (830 citations), Molecular Biology (3.4k citations), Aging (70 citations), Immunology (763 citations) and Biological Psychiatry (69 citations). Edward Y. Chen has collaborated with scholars based in United States, China and Italy. Frequent co-authors include Avi Ma’ayan, Qiaonan Duan, Christopher M. Tan, Neil R. Clark, Yan Kou, Gabriela Vaz Meirelles, Zichen Wang, Huilei Xu, Simon Gordonov and Maribel P. Lim. Their work appears in journals such as BMC Bioinformatics, Nature Medicine, Bioinformatics, Journal of the American Society of Nephrology and Journal of Clinical Investigation.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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