David Bednář

5.2k total citations · 1 hit paper
96 papers, 3.4k citations indexed

About

David Bednář is a scholar working on Molecular Biology, Materials Chemistry and Computational Theory and Mathematics. According to data from OpenAlex, David Bednář has authored 96 papers receiving a total of 3.4k indexed citations (citations by other indexed papers that have themselves been cited), including 77 papers in Molecular Biology, 27 papers in Materials Chemistry and 15 papers in Computational Theory and Mathematics. Recurrent topics in David Bednář's work include Protein Structure and Dynamics (45 papers), Enzyme Structure and Function (24 papers) and Microbial Metabolic Engineering and Bioproduction (17 papers). David Bednář is often cited by papers focused on Protein Structure and Dynamics (45 papers), Enzyme Structure and Function (24 papers) and Microbial Metabolic Engineering and Bioproduction (17 papers). David Bednář collaborates with scholars based in Czechia, United States and Germany. David Bednář's co-authors include Jiřı́ Damborský, Jan Štourač, Zbyněk Prokop, Jan Brezovský, Piia Kokkonen, Tomáš Martínek, Gaspar Pinto, Miloš Musil, Sérgio M. Marques and Jiří Hon and has published in prestigious journals such as Journal of the American Chemical Society, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

David Bednář

92 papers receiving 3.4k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Mechanism-Based Design of Efficient PET Hydrolases

2022 184 citations Ren Wei, Lara Pfaff et al. ACS Catalysis profile →

Peers

Countries citing papers authored by David Bednář

Since Specialization

Citations

This map shows the geographic impact of David Bednář's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by David Bednář with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites David Bednář more than expected).

Fields of papers citing papers by David Bednář

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by David Bednář. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by David Bednář. The network helps show where David Bednář may publish in the future.

Co-authorship network of co-authors of David Bednář

This figure shows the co-authorship network connecting the top 25 collaborators of David Bednář. A scholar is included among the top collaborators of David Bednář based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with David Bednář. David Bednář is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	AggreProt: a web server for predicting and engineering aggregation prone regions in proteins 2024 ·Nucleic Acids Research ·Joan Planas-Iglesias, (unknown), (unknown), (unknown), (unknown), (unknown), (unknown), Antonín Kunka, (unknown), Jiřı́ Damborský, Jan Martinovič, David Bednář	14
2	Identification, characterization, and engineering of glycosylation in thrombolytics 2023 ·Biotechnology Advances ·Martin Toul, (unknown), Jan Mičan, (unknown), (unknown), Erik Sedlák, David Bednář, Jiřı́ Damborský, Lenka Hernychová, Zbyněk Prokop	4
3	Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum 2023 ·Acta Crystallographica Section D Structural Biology ·(unknown), Sérgio M. Marques, Jiřı́ Damborský, David Bednář, Martin Marek	1
4	PredictONCO: a web tool supporting decision-making in precision oncology by extending the bioinformatics predictions with advanced computing and machine learning 2023 ·Briefings in Bioinformatics ·Jan Štourač, (unknown), (unknown), Petra Pokorná, (unknown), Joan Planas-Iglesias, Stanislav Mazurenko, Gaspar Pinto, (unknown), Jaroslav Štěrba, Ondřej Slabý, Jiřı́ Damborský, David Bednář	3
5	Illuminating the mechanism and allosteric behavior of NanoLuc luciferase 2023 ·Nature Communications ·(unknown), (unknown), (unknown), (unknown), (unknown), Tomáš Bárta, (unknown), (unknown), (unknown), (unknown), (unknown), Sérgio M. Marques, Martin Toul, Jiřı́ Damborský, Zbyněk Prokop, David Bednář, Yves L. Janin, Martin Marek	19
6	Exploring new galaxies: Perspectives on the discovery of novel PET-degrading enzymes 2023 ·Applied Catalysis B: Environmental ·Jan Mičan, Da’san M. M. Jaradat, Weidong Liu, Gert Weber, Stanislav Mazurenko, Uwe T. Bornscheuer, Jiřı́ Damborský, Ren Wei, David Bednář	41
7	Comparison of Fungal Thermophilic and Mesophilic Catalase–Peroxidases for Their Antioxidative Properties 2023 ·Antioxidants ·(unknown), Miloš Musil, David Bednář, Katarína Chovanová, Vladena Bauerová‐Hlinková, (unknown), (unknown), Péter Baráth, Marcel Zámocký	1
8	Follistatin-like 1 and its paralogs in heart development and cardiovascular disease 2022 ·Heart Failure Reviews ·(unknown), DeLisa Fairweather, Piia Kokkonen, David Bednář, Julie Bienertová Vašků	11
9	Deep Insights into the Specific Evolution of Fungal Hybrid B Heme Peroxidases 2022 ·Biology ·Marcel Zámocký, Miloš Musil, Maksym Danchenko, Peter Ferianc, Katarína Chovanová, Péter Baráth, (unknown), David Bednář	4
10	Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase 2022 ·ACS Catalysis ·Lara Pfaff, Jian Gao, Zhishuai Li, (unknown), Gert Weber, Jan Mičan, Yinping Chen, Weiliang Dong, Xu Han, C. Feiler, Yu‐Fei Ao, Christoffel P. S. Badenhorst, David Bednář, Gottfried J. Palm, Michael Lammers, Jiřı́ Damborský, Birgit Strodel, Weidong Liu, Uwe T. Bornscheuer, Ren Wei	126
11	Hidden Potential of Highly Efficient and Widely Accessible Thrombolytic Staphylokinase 2022 ·Stroke ·Martin Toul, Jan Mičan, (unknown), (unknown), Martin Marek, David Bednář, Jiřı́ Damborský, Zbyněk Prokop	7
12	Exploring mechanism of enzyme catalysis by on-chip transient kinetics coupled with global data analysis and molecular modeling 2021 ·Chem ·(unknown), (unknown), Piia Kokkonen, David Bednář, Jiřı́ Damborský, Andrew J. deMello, Zbyněk Prokop, Stavros Stavrakis	34
13	Engineering the protein dynamics of an ancestral luciferase 2021 ·Nature Communications ·Andrea Schenkmayerová, Gaspar Pinto, Martin Toul, Martin Marek, Lenka Hernychová, Joan Planas-Iglesias, Veronika Lišková, (unknown), (unknown), Stéphane Emond, Mark Dörr, Radka Chaloupková, David Bednář, Zbyněk Prokop, Florian Hollfelder, Uwe T. Bornscheuer, Jiřı́ Damborský	64
14	Virtual screening of potential anticancer drugs based on microbial products 2021 ·Seminars in Cancer Biology ·Gaspar Pinto, (unknown), Jan Štourač, Jiřı́ Damborský, David Bednář	8
15	SoluProt: prediction of soluble protein expression in Escherichia coli 2020 ·Bioinformatics ·Jiří Hon, (unknown), Tomáš Martínek, Antonín Kunka, Jaroslav Zendulka, David Bednář, Jiřı́ Damborský	126
16	FireProtASR: A Web Server for Fully Automated Ancestral Sequence Reconstruction 2020 ·Briefings in Bioinformatics ·Miloš Musil, (unknown), Andy Beier, Jan Štourač, (unknown), Jiřı́ Damborský, David Bednář	56
17	Engineering enzyme access tunnels 2019 ·Biotechnology Advances ·Piia Kokkonen, David Bednář, Gaspar Pinto, Zbyněk Prokop, Jiřı́ Damborský	168
18	Computer‐assisted engineering of hyperstable fibroblast growth factor 2 2017 ·Biotechnology and Bioengineering ·Pavel Dvořák, (unknown), David Bednář, (unknown), Lukáš Bálek, Lívia Eiselleová, Veronika Štěpánková, Eva Šebestová, Michaela Kunova Bosakova, (unknown), Stanislav Mazurenko, Antonín Kunka, Tereza Váňová, (unknown), Radka Chaloupková, Jan Brezovský, Pavel Krejčı́, Zbyněk Prokop, Petr Dvořák, Jiřı́ Damborský	53
19	FireProt: web server for automated design of thermostable proteins 2017 ·Nucleic Acids Research ·Miloš Musil, Jan Štourač, Jaroslav Bendl, Jan Brezovský, Zbyněk Prokop, Jaroslav Zendulka, Tomáš Martínek, David Bednář, Jiřı́ Damborský	155
20	Mutation of Aspartate Residues in the Third Extracellular Loop of the Rat B2 Bradykinin Receptor Decreases Affinity for Bradykinin 1994 ·Biochemical and Biophysical Research Communications ·Elizabeth A. Novotny, David Bednář, Maureen A. Connolly, (unknown), (unknown)	34

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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