Jiřı́ Damborský

18.9k total citations · 4 hit papers
328 papers, 13.7k citations indexed

About

Jiřı́ Damborský is a scholar working on Molecular Biology, Pollution and Materials Chemistry. According to data from OpenAlex, Jiřı́ Damborský has authored 328 papers receiving a total of 13.7k indexed citations (citations by other indexed papers that have themselves been cited), including 235 papers in Molecular Biology, 106 papers in Pollution and 94 papers in Materials Chemistry. Recurrent topics in Jiřı́ Damborský's work include Microbial bioremediation and biosurfactants (100 papers), Protein Structure and Dynamics (99 papers) and Enzyme Structure and Function (90 papers). Jiřı́ Damborský is often cited by papers focused on Microbial bioremediation and biosurfactants (100 papers), Protein Structure and Dynamics (99 papers) and Enzyme Structure and Function (90 papers). Jiřı́ Damborský collaborates with scholars based in Czechia, Japan and Germany. Jiřı́ Damborský's co-authors include Zbyněk Prokop, Jan Brezovský, David Bednář, Radka Chaloupková, Antonín Pavelka, Jan Štourač, Yuji Nagata, Eva Chovancová, Artur Góra and Jaroslav Koča and has published in prestigious journals such as Chemical Reviews, Proceedings of the National Academy of Sciences and Journal of the American Chemical Society.

In The Last Decade

Jiřı́ Damborský

317 papers receiving 13.6k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures

2012 1.0k citations Jan Brezovský, Jiřı́ Damborský et al. profile →
PredictSNP: Robust and Accurate Consensus Classifier for Prediction of Disease-Related Mutations

2014 604 citations Jaroslav Zendulka, Jan Brezovský et al. profile →
Strategies for Stabilization of Enzymes in Organic Solvents

2013 526 citations Šárka Bidmanová, Táňa Koudeláková et al. ACS Catalysis profile →
Mechanism-Based Design of Efficient PET Hydrolases

2022 184 citations Jan Mičan, David Bednář et al. ACS Catalysis profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Jiřı́ Damborský Czechia	58	9.5k	2.6k	2.6k	1.7k	980	328	13.7k
Andreas Schmid Germany	64	9.9k 1.0×	1.3k 0.5×	1.3k 0.5×	3.2k 1.9×	608 0.6×	260	13.6k
Frank M. Raushel United States	58	7.0k 0.7×	3.6k 1.4×	2.9k 1.1×	493 0.3×	489 0.5×	343	13.1k
Dietmar Schomburg Germany	60	10.4k 1.1×	315 0.1×	1.9k 0.7×	1.5k 0.9×	1.1k 1.1×	381	16.4k
Uwe T. Bornscheuer Germany	80	22.6k 2.4×	2.3k 0.9×	3.2k 1.3×	6.3k 3.7×	2.0k 2.1×	650	30.1k
Ali Akbar Moosavi‐Movahedi Iran	59	7.5k 0.8×	314 0.1×	2.0k 0.8×	1.0k 0.6×	624 0.6×	635	15.3k
Anthony J. Sinskey United States	67	9.4k 1.0×	1.7k 0.7×	1.1k 0.4×	3.6k 2.1×	1.1k 1.1×	286	14.7k
Huimin Zhao United States	83	18.5k 1.9×	485 0.2×	1.3k 0.5×	4.6k 2.7×	2.2k 2.3×	514	24.0k
Rizwan Hasan Khan India	64	9.9k 1.0×	268 0.1×	2.1k 0.8×	901 0.5×	625 0.6×	432	15.6k
Pedro Alexandrino Fernandes Portugal	52	6.3k 0.7×	274 0.1×	2.0k 0.8×	567 0.3×	461 0.5×	376	11.8k
Zbyněk Prokop Czechia	39	3.6k 0.4×	1.0k 0.4×	1.1k 0.4×	810 0.5×	415 0.4×	135	5.0k

Countries citing papers authored by Jiřı́ Damborský

Since Specialization

Citations

This map shows the geographic impact of Jiřı́ Damborský's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jiřı́ Damborský with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jiřı́ Damborský more than expected).

Fields of papers citing papers by Jiřı́ Damborský

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jiřı́ Damborský. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jiřı́ Damborský. The network helps show where Jiřı́ Damborský may publish in the future.

Co-authorship network of co-authors of Jiřı́ Damborský

This figure shows the co-authorship network connecting the top 25 collaborators of Jiřı́ Damborský. A scholar is included among the top collaborators of Jiřı́ Damborský based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jiřı́ Damborský. Jiřı́ Damborský is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

1.

Damborský, Jiřı́, et al.. (2025). Biochemical and Computational Characterization of Haloalkane Dehalogenase Variants Designed by Generative AI: Accelerating the S_N2 Step. Journal of the American Chemical Society. 147(3). 2747–2755. 5 indexed citations

2.

Mukherjee, Arnab, Jiřı́ Damborský, Zbyněk Prokop, et al.. (2025). Functional Characterization of Luciferase in a Brittle Star Indicates Parallel Evolution Influenced by Genomic Availability of Haloalkane Dehalogenase. Molecular Biology and Evolution. 42(5). 1 indexed citations

3.

Planas-Iglesias, Joan, et al.. (2024). AggreProt: a web server for predicting and engineering aggregation prone regions in proteins. Nucleic Acids Research. 52(W1). W159–W169. 14 indexed citations

4.

Buller, Rebecca, Jiřı́ Damborský, Donald Hilvert, & Uwe T. Bornscheuer. (2024). Structure Prediction and Computational Protein Design for Efficient Biocatalysts and Bioactive Proteins. Angewandte Chemie International Edition. 64(2). e202421686–e202421686. 16 indexed citations

5.

Buller, Rebecca, Jiřı́ Damborský, Donald Hilvert, & Uwe T. Bornscheuer. (2024). Structure Prediction and Computational Protein Design for Efficient Biocatalysts and Bioactive Proteins. Angewandte Chemie. 137(2).

6.

Toul, Martin, Jan Mičan, Erik Sedlák, et al.. (2023). Identification, characterization, and engineering of glycosylation in thrombolytics. Biotechnology Advances. 66. 108174–108174. 4 indexed citations

7.

Kohout, Pavel, et al.. (2023). Machine Learning-Guided Protein Engineering. ACS Catalysis. 13(21). 13863–13895. 88 indexed citations

8.

Marques, Sérgio M., et al.. (2023). Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum. Acta Crystallographica Section D Structural Biology. 79(11). 956–970. 1 indexed citations

9.

Bárta, Tomáš, Sérgio M. Marques, Martin Toul, et al.. (2023). Illuminating the mechanism and allosteric behavior of NanoLuc luciferase. Nature Communications. 14(1). 7864–7864. 19 indexed citations

10.

Bohačiaková, Dáša, et al.. (2022). Geometric Control of Cell Behavior by Biomolecule Nanodistribution. ACS Biomaterials Science & Engineering. 8(11). 4789–4806. 1 indexed citations

11.

Toul, Martin, Jan Mičan, Martin Marek, et al.. (2022). Hidden Potential of Highly Efficient and Widely Accessible Thrombolytic Staphylokinase. Stroke. 53(10). 3235–3237. 7 indexed citations

12.

Hon, Jiří, Tomáš Martínek, Antonín Kunka, et al.. (2020). SoluProt: prediction of soluble protein expression in Escherichia coli. Bioinformatics. 37(1). 23–28. 126 indexed citations

13.

Drienovská, Ivana, Pavlína Řezáčová, Michal Kutý, et al.. (2013). Crystallographic analysis of new psychrophilic haloalkane dehalogenases: DpcA fromPsychrobacter cryohalolentisK5 and DmxA fromMarinobactersp. ELB17. Acta Crystallographica Section F Structural Biology and Crystallization Communications. 69(6). 683–688. 8 indexed citations

14.

Bouchal, Pavel, Jiří Jarkovský, Kristýna Hrazdilová, et al.. (2011). The new platinum-based anticancer agent LA-12 induces retinol binding protein 4 in vivo. Proteome Science. 9(1). 68–68. 18 indexed citations

15.

Stsiapanava, Alena, Jan Dohnálek, Michal Kutý, et al.. (2010). Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels. Acta Crystallographica Section D Biological Crystallography. 66(9). 962–969. 13 indexed citations

16.

Bidmanová, Šárka, Miroslav Pohanka, Jiřı́ Cabal, Zbyněk Prokop, & Jiřı́ Damborský. (2010). Early Warning Biosensors for Detection of Chemical Warfare Agents.. Chemické listy. 104(104). 1 indexed citations

17.

Damborský, Jiřı́ & Jan Brezovský. (2009). Computational tools for designing and engineering biocatalysts. Current Opinion in Chemical Biology. 13(1). 26–34. 87 indexed citations

18.

Koudeláková, Táňa, et al.. (2008). Crystals of DhaA Mutants from Rhodococcus rhodochrous NCIMB13064 Diffracted to Ultrahigh Resolution: Crystallization andPreliminary Diffraction Analysis.. Acta Crystallographica Section D Biological Crystallography. 1 indexed citations

19.

Bosma, Tjibbe, Jiřı́ Damborský, Gerhard Stucki, & Dick B. Janssen. (2002). Biodegradation of 1,2,3-Trichloropropane through Directed Evolution and Heterologous Expression of a Haloalkane Dehalogenase Gene. Applied and Environmental Microbiology. 68(7). 3582–3587. 104 indexed citations

20.

Kutý, Michal, Jiřı́ Damborský, Martin Prokop, & Jaroslav Koča. (1998). A molecular modelling study of the catalytic mechanism ofhaloalkane dehalogenase: 2. Quantum chemical study of completereaction mechanism.. Journal of Chemical Information and Computer Sciences.

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