Daniel J. Rigden

15.4k citations

259 papers · 10.2k indexed · 2 hit papers · h-index 52

Molecular Biology top 0.5%
- RNA and protein synthesis mechanisms 48
- Protein Structure and Dynamics 42
- RNA modifications and cancer 37
- Insect Resistance and Genetics 22
- Biochemical and Molecular Research 20
- Genomics and Phylogenetic Studies 20
Biotechnology top 0.5%
Microbiology top 1%
Cell Biology top 1%
Cancer Research top 2%
Materials Chemistry
- Enzyme Structure and Function 64
Epidemiology
- Trypanosoma species research and implications 19

Co-authors: Michael Y. Galperin Octávio Luiz Franco Maria Fátima Grossi‐de‐Sá Paul A.M. Michels Mark J. Jedrzejas Michael J. Clague Sylvie Urbé Francislete Rodrigues Melo
Cited by: Molecular Biology Biotechnology Microbiology
Journals: Nucleic Acids Research (22 papers)Proteins Structure Function and Bioinformatics (18 papers)FEBS Letters (16 papers)
Partner nations: United Kingdom United States Brazil

In The Last Decade

Daniel J. Rigden

253 papers receiving 10.1k citations

Hit Papers

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Peers

Countries citing papers authored by Daniel J. Rigden

Since Specialization

Citations

This map shows the geographic impact of Daniel J. Rigden's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Daniel J. Rigden with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Daniel J. Rigden more than expected).

Fields of papers citing papers by Daniel J. Rigden

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Daniel J. Rigden. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Daniel J. Rigden. The network helps show where Daniel J. Rigden may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Daniel J. Rigden, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Daniel J. Rigden Line = papers co-authored together Daniel J. Rigden links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Slice'N'Dice: maximizing the value of predicted models for structural biologists Acta Crystallographica Section D Structural Biology ·Adam J. Simpkin,yuange he,Fenfen Dai,Tom Burnley,Ran Yam,Filomeno Sánchez Rodríguez,Maria Fando,Eugene Krissinel,Stuart McNicholas,Daniel J. Rigden,Ronan M. Keegan	2025	2
2	Bacterial polysaccharide lyase family 33: Specificity from an evolutionarily conserved binding tunnel Proceedings of the National Academy of Sciences ·Mélanie Loiodice,Élodie Drula,Robern Julien,S.V. Antonyuk,Arnaud Baslé,Marcelo A. Lima,Edwin A. Yates,Dominic P. Byrne,Jamie Coughlan,Andrew Leech,Aiman Aditya Muchtar,Daniel J. Rigden,Sophie Drouillard,William Helbert,Irena Nikolova,Nicolas Terrapon,Gareth S. A. Wright,Marie Couturier,Alan Cartmell	2025	2
3	Statistical modeling of single-cell epitranscriptomics enabled trajectory and regulatory inference of RNA methylation Cell Genomics ·Haozhe Wang,Yue Wang,刘正,Bowen Song,Gang Tu,Anh Nguyen,Jionglong Su,Frans Coenen,Zhi Wei,Daniel J. Rigden,Jia Meng	2024	2
4	ABCFold: easier running and comparison of AlphaFold 3, Boltz-1, and Chai-1 Bioinformatics Advances ·Woong-Chul Shin,Adam J. Simpkin,Daniel J. Rigden	2024	2
5	The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection Nucleic Acids Research ·Daniel J. Rigden,Xosé M. Fernández	2023	18
6	Breaking the conformational ensemble barrier: Ensemble structure modeling challenges in CASP15 Proteins Structure Function and Bioinformatics ·Andriy Kryshtafovych,G.T. Montelione,Daniel J. Rigden,Aiman Aditya Muchtar,Ezgi Karaca,John Moult	2023	18
7	CASP15 cryo‐EM protein and RNA targets: Refinement and analysis using experimental maps Proteins Structure Function and Bioinformatics ·Evan Bracken,Rachael C. Kretsch,Woong-Chul Shin,Nader Alawadhi,Andriy Kryshtafovych,Daniel J. Rigden,Rhiju Das,Maya Topf	2023	8
8	Assessment of three‐dimensional RNA structure prediction in CASP15 Proteins Structure Function and Bioinformatics ·Rhiju Das,Rachael C. Kretsch,Adam J. Simpkin,Evan Bracken,Phillip Pham,Ramya Rangan,Fan Bu,Ronan M. Keegan,Maya Topf,Daniel J. Rigden,Zhichao Miao,Éric Westhof	2023	72
9	m6A-TSHub: Unveiling the Context-Specific m 6 A Methylation and m 6 A-Affecting Mutations in 23 Human Tissues Genomics Proteomics & Bioinformatics ·Bowen Song,Daiyun Huang,Yuxin Zhang,Zhen Wei,Jionglong Su,João Pedro de Magalhães,Daniel J. Rigden,Jia Meng,Kunqi Chen	2022	29
10	Carboxyl Methyltransferase Catalysed Formation of Mono‐ and Dimethyl Esters under Aqueous Conditions: Application in Cascade Biocatalysis Angewandte Chemie International Edition ·Adriane Earl P. Rodio,Hannah V. McCue,Daniel J. Rigden,Neil M. Kershaw,Álvaro Gil Plana,Abiarso Widoseno,Pedro Mendoza-Zélis,James R. Johnson,Andrew J. Carnell	2022	8
11	Multitasking in the gut:X-ray structure of a multidomain BbgIII from Bifidobacterium bifidum offers possible explanations for its alternative functions White Rose Research Online (University of Leeds, The University of Sheffield, University of York) ·Olga V. Moroz,E.V. Blagova,Andrey A. Lebedev,Filomeno Sánchez Rodríguez,Daniel J. Rigden,Jeppe Wegener Tams,Reinhard Wilting,Jan Kjølhede Vester,H.,Д. Н. Лапаев,Kristian B. R. M. Krogh,Roland A. Pache,G.J. Davies,Keith S. Wilson	2021	0
12	Bodo saltans (Kinetoplastida) is dependent on a novel Paracaedibacter -like endosymbiont that possesses multiple putative toxin-antitoxin systems The ISME Journal ·Samriti Midha,Daniel J. Rigden,Stefanos Siozios,Gregory D. D. Hurst,Andrew P. Jackson	2021	14
13	m5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome Nucleic Acids Research ·Jiongming Ma,Bowen Song,Zhen Wei,Daiyun Huang,Yuxin Zhang,Jionglong Su,João Pedro de Magalhães,Daniel J. Rigden,Jia Meng,Kunqi Chen	2021	83
14	m7GHub: deciphering the location, regulation and pathogenesis of internal mRNA N7-methylguanosine (m7G) sites in human Bioinformatics ·Bowen Song,Yujiao Tang,Kunqi Chen,Zhen Wei,Rong Rong,Zhi-Liang Lu,Jionglong Su,João Pedro de Magalhães,Daniel J. Rigden,Jia Meng	2020	99
15	RMDisease: a database of genetic variants that affect RNA modifications, with implications for epitranscriptome pathogenesis Nucleic Acids Research ·Kunqi Chen,Bowen Song,Yujiao Tang,Zhen Wei,Qingru Xu,Jionglong Su,João Pedro de Magalhães,Daniel J. Rigden,Jia Meng	2020	76
16	WHISTLE: a high-accuracy map of the human N6-methyladenosine (m6A) epitranscriptome predicted using a machine learning approach Nucleic Acids Research ·Kunqi Chen,Zhen Wei,Qing Zhang,Michael M. Minieka,Rong Rong,Zhi-Liang Lu,Jionglong Su,João Pedro de Magalhães,Daniel J. Rigden,Jia Meng	2019	181
17	Glareosin: a novel sexually dimorphic urinary lipocalin in the bank vole, Myodes glareolus Open Biology ·C. Bärenz,Е.В. Коновалова,Patricia E. Heekin,Tomoko Iharada,Kathryn S. Lilley,Deborah M. Simpson,Daniel J. Rigden,Jane L. Hurst,Robert J. Beynon	2017	7
18	Exploration of pathomechanisms triggered by a single-nucleotide polymorphism in titin's I-band: the cardiomyopathy-linked mutation T2580I Open Biology ·Julius Bogomolovas,Jennifer R. Fleming,Brian Anderson,Kanchan Shakhakarmi,Stephan Lange,Bernd Simon,Muzamil Majid Khan,Rüdiger Rudolf,Barbara Franke,Belinda Bullard,Daniel J. Rigden,Henk Granzier,Siegfried Labeit,Olga Mayans	2016	15
19	Family-wide characterization of the DENN domain Rab GDP-GTP exchange factors The Journal of Cell Biology ·Shin‐ichiro Yoshimura,Andreas Gerondopoulos,Andrea Linford,Daniel J. Rigden,Francis A. Barr	2010	258
20	Plant-like traits associated with metabolism of Trypanosoma parasites Proceedings of the National Academy of Sciences ·Véronique Hannaert,Emma Saavedra,Francis Duffieux,Jean‐Pierre Szikora,Daniel J. Rigden,Paul A.M. Michels,Fred R. Opperdoes	2003	174

About Daniel J. Rigden

Daniel J. Rigden is a scholar working on Molecular Biology, Biochemistry and Biotechnology, having authored 259 papers that have together received 10.2k indexed citations. Recurring topics across this work include Enzyme Structure and Function (64 papers), RNA and protein synthesis mechanisms (48 papers), Protein Structure and Dynamics (42 papers), RNA modifications and cancer (37 papers), Insect Resistance and Genetics (22 papers), Biochemical and Molecular Research (20 papers), Genomics and Phylogenetic Studies (20 papers) and Trypanosoma species research and implications (19 papers). The work is most often cited by research in Molecular Biology (7.1k citations), Biotechnology (698 citations) and Microbiology (386 citations). Daniel J. Rigden has collaborated with scholars based in United Kingdom, United States and Brazil. Frequent co-authors include Michael Y. Galperin, Octávio Luiz Franco, Maria Fátima Grossi‐de‐Sá, Paul A.M. Michels, Mark J. Jedrzejas, Michael J. Clague, Sylvie Urbé, Francislete Rodrigues Melo, Xosé M. Fernández and Ronan M. Keegan. Their work appears in journals such as Nucleic Acids Research, Proteins Structure Function and Bioinformatics, FEBS Letters, Acta Crystallographica Section D Structural Biology and Journal of Molecular Biology.

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