Daniel H. Haft

64.4k total citations · 7 hit papers
58 papers, 9.3k citations indexed

About

Daniel H. Haft is a scholar working on Molecular Biology, Molecular Medicine and Ecology. According to data from OpenAlex, Daniel H. Haft has authored 58 papers receiving a total of 9.3k indexed citations (citations by other indexed papers that have themselves been cited), including 46 papers in Molecular Biology, 8 papers in Molecular Medicine and 6 papers in Ecology. Recurrent topics in Daniel H. Haft's work include Genomics and Phylogenetic Studies (22 papers), RNA and protein synthesis mechanisms (13 papers) and Machine Learning in Bioinformatics (11 papers). Daniel H. Haft is often cited by papers focused on Genomics and Phylogenetic Studies (22 papers), RNA and protein synthesis mechanisms (13 papers) and Machine Learning in Bioinformatics (11 papers). Daniel H. Haft collaborates with scholars based in United States, United Kingdom and Italy. Daniel H. Haft's co-authors include Jeremy Selengut, William Nelson, Malay Kumar Basu, Emmanuel F. Mongodin, John van der Oost, Yuri I. Wolf, Emmanuelle Charpentier, Sylvain Moineau, Stan J. J. Brouns and Eugene V. Koonin and has published in prestigious journals such as Nature, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

Daniel H. Haft

55 papers receiving 9.2k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Evolution and classification of the CRISPR–Cas systems

2011 1.9k citations Kira S. Makarova, Daniel H. Haft et al. Nature Reviews Microbiology profile →
Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates

2019 851 citations Michael Feldgarden, Vyacheslav Brover et al. Antimicrobial Agents and Chemotherapy profile →
AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence

2021 733 citations Michael Feldgarden, Vyacheslav Brover et al. Scientific Reports profile →
A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes

2005 729 citations Daniel H. Haft, Jeremy Selengut et al. PLoS Computational Biology profile →
A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi

2000 656 citations Granger Sutton, Daniel H. Haft et al. profile →
The TIGRFAMs database of protein families

2003 655 citations Daniel H. Haft Nucleic Acids Research profile →
SMURF: Genomic mapping of fungal secondary metabolite clusters

2010 549 citations Daniel H. Haft et al. profile →

Peers

Countries citing papers authored by Daniel H. Haft

Since Specialization

Citations

This map shows the geographic impact of Daniel H. Haft's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Daniel H. Haft with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Daniel H. Haft more than expected).

Fields of papers citing papers by Daniel H. Haft

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Daniel H. Haft. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Daniel H. Haft. The network helps show where Daniel H. Haft may publish in the future.

Co-authorship network of co-authors of Daniel H. Haft

This figure shows the co-authorship network connecting the top 25 collaborators of Daniel H. Haft. A scholar is included among the top collaborators of Daniel H. Haft based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Daniel H. Haft. Daniel H. Haft is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work	Indexed citations
1	Cyanoexosortase B is essential for motility, biofilm formation, and scytonemin production in a filamentous cyanobacterium 2025 ·mSphere ·(unknown), Daniel H. Haft, (unknown), Ferrán García‐Pichel, Christopher C. Ebmeier, Douglas D. Risser	0
2	β-Lactamase diversity in Acinetobacter baumannii 2025 ·Antimicrobial Agents and Chemotherapy ·Andrew R Mack, Andrea M. Hujer, María F. Mojica, Magdalena A. Taracila, Michael Feldgarden, Daniel H. Haft, William Klimke, Arjun Prasad, Robert A. Bonomo	5
3	β-Lactamase diversity in Pseudomonas aeruginosa 2025 ·Antimicrobial Agents and Chemotherapy ·Andrew R Mack, Andrea M. Hujer, María F. Mojica, Magdalena A. Taracila, Michael Feldgarden, Daniel H. Haft, William Klimke, Arjun Prasad, Robert A. Bonomo	6
4	In silico discovery of the myxosortases that process MYXO-CTERM and three novel prokaryotic C-terminal protein-sorting signals that share invariant Cys residues 2023 ·Journal of Bacteriology ·Daniel H. Haft	2
5	RefSeq and the prokaryotic genome annotation pipeline in the age of metagenomes 2023 ·Nucleic Acids Research ·Daniel H. Haft, Azat Badretdin, George Coulouris, Michael DiCuccio, A. Scott Durkin, (unknown), Wenjun Li, (unknown), Kathleen O’Neill, (unknown), Françoise Thibaud‐Nissen	38
6	Consensus on β-Lactamase Nomenclature 2022 ·Antimicrobial Agents and Chemotherapy ·Patricia A. Bradford, Robert A. Bonomo, Karen Bush, Alessandra Carattoli, Michael Feldgarden, Daniel H. Haft, Yoshikazu Ishii, George A. Jacoby, William Klimke, Timothy Palzkill, Laurent Poirel, Gian María Rossolini, Pranita D. Tamma, César A. Arias	16
7	AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence breakdown → 2021 ·Scientific Reports ·Michael Feldgarden, Vyacheslav Brover, Narjol González‐Escalona, Jonathan G. Frye, Julie Haendiges, Daniel H. Haft, Maria Hoffmann, James Pettengill, Arjun Prasad, Glenn E. Tillman, Gregory H. Tyson, William Klimke	733
8	A comprehensive software suite for protein family construction and functional site prediction 2017 ·PLoS ONE ·(unknown), Daniel H. Haft, (unknown), (unknown)	5
9	Using comparative genomics to drive new discoveries in microbiology 2015 ·Current Opinion in Microbiology ·Daniel H. Haft	17
10	Identification of Widespread Adenosine Nucleotide Binding in Mycobacterium tuberculosis 2013 ·PubMed Central ·Charles Ansong, Corrie Ortega, Samuel Payne, Daniel H. Haft, (unknown), Michael Lewis, Anja R. Ollodart, Samuel Purvine, Anil Shukla, Suereta Fortuin, Richard Smith, Joshua Adkins, Christoph Grundner, Aaron Wright	42
11	Pathogenomic Inference of Virulence-Associated Genes in Leptospira interrogans 2013 ·PLoS neglected tropical diseases ·Jason Lehmann, Derrick E. Fouts, Daniel H. Haft, Anthony P. Cannella, Jessica N. Ricaldi, Lauren Brinkac, Derek M. Harkins, Scott Durkin, Ravi Sanka, Granger Sutton, (unknown), Joseph M. Vinetz, Michael A. Matthias	41
12	TIGRFAMs and Genome Properties in 2013 2012 ·Nucleic Acids Research ·Daniel H. Haft, Jeremy Selengut, R. Alexander Richter, Derek M. Harkins, Malay Kumar Basu, Erin Beck	406
13	Evolution and classification of the CRISPR–Cas systems breakdown → 2011 ·Nature Reviews Microbiology ·Kira S. Makarova, Daniel H. Haft, Rodolphe Barrangou, Stan J. J. Brouns, Emmanuelle Charpentier, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, Yuri I. Wolf, Alexander F. Yakunin, John van der Oost, Eugene V. Koonin	1865
14	ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process 2011 ·BMC Bioinformatics ·Malay Kumar Basu, Jeremy Selengut, Daniel H. Haft	17
15	Archaeosortases and Exosortases Are Widely Distributed Systems Linking Membrane Transit with Posttranslational Modification 2011 ·Journal of Bacteriology ·Daniel H. Haft, Samuel Payne, Jeremy Selengut	66
16	Expansion of ribosomally produced natural products: a nitrile hydratase- and Nif11-related precursor family 2010 ·BMC Biology ·Daniel H. Haft, Malay Kumar Basu, Douglas A. Mitchell	123
17	Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein function 2010 ·BMC Bioinformatics ·Jeremy Selengut, Douglas B. Rusch, Daniel H. Haft	12
18	Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic 2006 ·BMC Biology ·Daniel H. Haft, Ian T. Paulsen, Naomi Ward, Jeremy Selengut	88
19	A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes breakdown → 2005 ·PLoS Computational Biology ·Daniel H. Haft, Jeremy Selengut, Emmanuel F. Mongodin, William Nelson	729
20	Identification and Characterization of SNX15, a Novel Sorting Nexin Involved in Protein Trafficking 2001 ·Journal of Biological Chemistry ·Susan A. Phillips, Valarie A. Barr, Daniel H. Haft, Simeon I. Taylor, Carol Renfrew Haft	76

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact