Alexandre Lomsadze

20.2k citations
27 papers · 10.8k indexed · 9 hit papers · h-index 18
Topics
Genomics and Phylogenetic Studies (21 papers)RNA and protein synthesis mechanisms (15 papers)Machine Learning in Bioinformatics (9 papers)
Journals
Nucleic Acids ResearchSHILAP Revista de lepidopterologíaBioinformatics

In The Last Decade

Alexandre Lomsadze

26 papers receiving 10.7k citations

Hit Papers

NCBI prokaryotic genome annotation pipeline20052026201220192016201020212015200810002.0k3.0k4.0k

Peers

Alexandre Lomsadze
Comparison fields: 5 of 157
  • Molecular Biology 6.5k
  • Plant Science 3.2k
  • Ecology 2.8k
  • Genetics 1.2k
  • Food Science 967
Replace Mark Borodovsky with:
Mark Borodovsky United States
Eric P. Nawrocki United States
Ning Ma China
Christina A. Cuomo United States
Qiandong Zeng United States
Daniel R. Zerbino United Kingdom
Sergey Koren United States
Todd M. Lowe United States
Nicholas H. Bergman United States
Terrance Shea United States
Alexandre Lomsadze relative to Mark Borodovsky United States Mark Borodovsky's profile →
Citations per field
00.5×1.5×
Mark Borodovsky · 1×
Citations per year

Countries citing papers authored by Alexandre Lomsadze

Since Specialization
Citations

This map shows the geographic impact of Alexandre Lomsadze's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Alexandre Lomsadze with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Alexandre Lomsadze more than expected).

Fields of papers citing papers by Alexandre Lomsadze

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Alexandre Lomsadze. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Alexandre Lomsadze. The network helps show where Alexandre Lomsadze may publish in the future.

Co-authorship network of co-authors of Alexandre Lomsadze

This figure shows the co-authorship network connecting the top 25 collaborators of Alexandre Lomsadze. A scholar is included among the top collaborators of Alexandre Lomsadze based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Alexandre Lomsadze. Alexandre Lomsadze is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
#WorkIndexed citations
1 35
2
BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS, and TSEBRAbreakdown →
172
3 7
4
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein databasebreakdown →
803
5 1
6
GeneMark-EP+: eukaryotic gene prediction with self-training in the space of genes and proteinsbreakdown →
315
7 13
8 5
9 0
10 123
11
NCBI prokaryotic genome annotation pipelinebreakdown →
4619
12
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUSbreakdown →
717
13 304
14 95
15
Ab initio gene identification in metagenomic sequencesbreakdown →
1252
16 11
17 29
18
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised trainingbreakdown →
689
19
Gene identification in novel eukaryotic genomes by self-training algorithmbreakdown →
640
20 121

About Alexandre Lomsadze

Alexandre Lomsadze is a scholar working on Molecular Biology, Parasitology and Ecology, having authored 27 papers that have together received 10.8k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (21 papers), RNA and protein synthesis mechanisms (15 papers) and Machine Learning in Bioinformatics (9 papers). The work is most often cited by research in Endocrinology (743 citations), Horticulture (114 citations) and Ecology (2.8k citations). Alexandre Lomsadze has collaborated with scholars based in United States, Russia and Germany. Frequent co-authors include Mark Borodovsky, Vyacheslav Chetvernin, Leonid Zaslavsky, Eric P. Nawrocki, Michael DiCuccio, Tatiana Tatusova, James Ostell, Azat Badretdin, Kim D. Pruitt and Katharina J. Hoff. Their work appears in journals such as Nucleic Acids Research, SHILAP Revista de lepidopterología and Bioinformatics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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