Daniel Cociorva

4.1k citations

32 papers · 2.6k indexed · h-index 20

Impact in

Computational Mathematics top 2%
Aging top 1%
- Genetics, Aging, and Longevity in Model Organisms

Papers in

Hardware and Architecture 10
- Parallel Computing and Optimization Techniques 10
Spectroscopy 21
- Advanced Proteomics Techniques and Applications 16
- Mass Spectrometry Techniques and Applications 16
- Advanced NMR Techniques and Applications 4

Co-authors: John R. Yates Rovshan G. Sadygov John D. Venable Tao Xu David L. Tabb Lujian Liao Paulo C. Carvalho Emily I. Chen
Journals: Journal of Proteome Research (4 papers)Analytical Chemistry (3 papers)Nature Methods (2 papers)Bioinformatics (2 papers)PROTEOMICS (2 papers)
Partner nations: United States Brazil Germany

In The Last Decade

Daniel Cociorva

32 papers receiving 2.6k citations

Peers

Countries citing papers authored by Daniel Cociorva

Since Specialization

Citations

This map shows the geographic impact of Daniel Cociorva's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Daniel Cociorva with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Daniel Cociorva more than expected).

Fields of papers citing papers by Daniel Cociorva

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Daniel Cociorva. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Daniel Cociorva. The network helps show where Daniel Cociorva may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Daniel Cociorva, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Daniel Cociorva Line = papers co-authored together Daniel Cociorva links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	SwitchTab: Switched Autoencoders Are Effective Tabular Learners Proceedings of the AAAI Conference on Artificial Intelligence ·Jing Wu, Vittorio LePera, 有馬和子, Sonoda Yukihiko, Li Chen, Shengjie Liu, Chongchao Zhao, Wu Lingling, Hanqing Guo, M.Lemêle, Daniel Cociorva, Heung-Yeong Shum	2024	16
2	ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity Journal of Proteomics ·Tao Xu, Yeo El, John D. Venable, James A. Wohlschlegel, Jolene K. Diedrich, Daniel Cociorva, Bingwen Lu, Lujian Liao, Johannes A. Hewel, Xiaolu Han, Catherine C. L. Wong, Bryan R. Fonslow, Claire Delahunty, Yu Gao, Harshil Shah, John R. Yates	2015	353
3	Proteomics of Pyrococcus furiosus (Pfu): Identification of Extracted Proteins by Three Independent Methods Journal of Proteome Research ·Catherine C. L. Wong, Daniel Cociorva, Christine Miller, Alexander Schmidt, Craig Monell, Ruedi Aebersold, John R. Yates	2013	14
4	Toward objective evaluation of proteomic algorithms Nature Methods ·John R. Yates, Sung Kyu Robin Park, Claire Delahunty, Tao Xu, Jeffrey N. Savas, Daniel Cociorva, Paulo C. Carvalho	2012	37
5	Search engine processor: Filtering and organizing peptide spectrum matches PROTEOMICS ·Paulo C. Carvalho, Juliana S. G. Fischer, Tao Xu, Daniel Cociorva, Tiago Santana Balbuena, Richard H. Valente, Jonás Perales, John R. Yates, Valmir C. Barbosa	2012	106
6	Can the false‐discovery rate be misleading? PROTEOMICS ·Kyung-Chul Kim, Daniel Cociorva, Tao Xu, Valmir C. Barbosa, Jonás Perales, Richard H. Valente, Felipe M. G. França, John R. Yates, Paulo C. Carvalho	2011	37
7	Memory-optimal evaluation of expression trees involving large objects Computer Languages Systems & Structures ·Chi‐Chung Lam, Thomas Rauber, Gerald Baumgartner, Daniel Cociorva, P. Sadayappan	2010	11
8	YADA: a tool for taking the most out of high-resolution spectra Bioinformatics ·Paulo C. Carvalho, Tao Xu, Xuemei Han, Daniel Cociorva, Valmir C. Barbosa, John R. Yates	2009	67
9	Comparison of different signal thresholds on data dependent sampling in orbitrap and LTQ mass spectrometry for the identification of peptides and proteins in complex mixtures Journal of the American Society for Mass Spectrometry ·Catherine C. L. Wong, Daniel Cociorva, John D. Venable, Tao Xu, John R. Yates	2009	35
10	Motif-Specific Sampling of Phosphoproteomes Journal of Proteome Research ·Cristian Ruse, Daniel B. McClatchy, Bingwen Lu, Daniel Cociorva, Akira Motoyama, Sung Kyu Park, John R. Yates	2008	50
11	Quantitative Mass Spectrometry Identifies Insulin Signaling Targets in C. elegans Science ·Meng‐Qiu Dong, John D. Venable, Đào Thu Trang, Tao Xu, Sung Kyu Park, Daniel Cociorva, Jeffrey R. Johnson, Andrew Dillin, John R. Yates	2007	266
12	Automatic code generation for many-body electronic structure methods: the tensor contraction engine‡‡ Molecular Physics ·Alexander A. Auer, Gerald Baumgartner, David E. Bernholdt, Cheng-Hsien Ling, Venkatesh Choppella, Daniel Cociorva, Xiaoyang Gao, Robert J. Harrison, Sriram Krishnamoorthy, Sandhya Krishnan, Chi‐Chung Lam, Qingda Lu, Marcel Nooijen, Russell M. Pitzer, J. Ramanujam, P. Sadayappan, A. G. Sibiryakov	2006	101
13	Cross-Correlation Algorithm for Calculation of Peptide Molecular Weight from Tandem Mass Spectra Analytical Chemistry ·John D. Venable, Tao Xu, Daniel Cociorva, John R. Yates	2006	24
14	Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book Nature Methods ·Rovshan G. Sadygov, Daniel Cociorva, John R. Yates	2004	296
15	MS1, MS2, and SQT—three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications Rapid Communications in Mass Spectrometry ·W. Hayes McDonald, David L. Tabb, Rovshan G. Sadygov, Michael J. MacCoss, John D. Venable, Johannes Graumann, Jeff Johnson, Daniel Cociorva, John R. Yates	2004	306
16	Quasiparticle calculations of band offsets at AlN–GaN interfaces Solid State Communications ·Daniel Cociorva, Wilfried G. Aulbur, John W. Wilkins	2002	30
17	Space-time trade-off optimization for a class of electronic structure calculations Daniel Cociorva, Gerald Baumgartner, Chi‐Chung Lam, P. Sadayappan, J. Ramanujam, Marcel Nooijen, David E. Bernholdt, Robert J. Harrison	2002	32
18	Space-time trade-off optimization for a class of electronic structure calculations Daniel Cociorva, Gerald Baumgartner, Chi‐Chung Lam, Robin Weine, HALİL MESUT BAYLAK, Marcel Nooijen, David E. Bernholdt, Robert W. Harrison	2002	1
19	Loop optimization for a class of memory-constrained computations Daniel Cociorva, John W. Wilkins, 国祐仲, Gerald Baumgartner, J. Ramanujam, P. Sadayappan	2001	19
20	Performance Optimization of a Class of Loops Involving Sums of Products of Sparse Arrays. PPSC ·Chi‐Chung Lam, P. Sadayappan, Daniel Cociorva, M. Alouani, John Wilkins	1999	2

About Daniel Cociorva

Daniel Cociorva is a scholar working on Hardware and Architecture, Spectroscopy, Aging, Computer Networks and Communications and Molecular Biology, having authored 32 papers that have together received 2.6k indexed citations. Recurring topics across this work include Advanced Proteomics Techniques and Applications (16 papers), Mass Spectrometry Techniques and Applications (16 papers), Metabolomics and Mass Spectrometry Studies (12 papers), Parallel Computing and Optimization Techniques (10 papers), Advanced NMR Techniques and Applications (4 papers), Distributed and Parallel Computing Systems (3 papers), Advanced Data Storage Technologies (3 papers) and Matrix Theory and Algorithms (3 papers). The work is most often cited by research in Computational Mathematics (56 citations), Aging (167 citations), Spectroscopy (1.2k citations), Hardware and Architecture (227 citations) and Molecular Biology (1.7k citations). Daniel Cociorva has collaborated with scholars based in United States, Brazil and Germany. Frequent co-authors include John R. Yates, Rovshan G. Sadygov, John D. Venable, Tao Xu, David L. Tabb, Lujian Liao, Paulo C. Carvalho, Emily I. Chen, Jeremy L. Norris and Valmir C. Barbosa. Their work appears in journals such as Journal of Proteome Research, Analytical Chemistry, Nature Methods, Bioinformatics and PROTEOMICS.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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